RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 A0A1W2PQ72 361 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 RRN3P2A6NIE6 340 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 ERI2A8K979 691 aaKnown RBP10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 CTDSP2O14595 271 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 NOS1APO75052 506 aaPredicted RBP10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 ZNF780AO75290 641 aaPredicted RBP10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 CDK14O94921 469 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 C22orf31O95567 290 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 RAP2AP10114 183 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 NAT2P11245 290 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 DDX5P17844 614 aaKnown RBP10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 GRIA1P42261 906 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 SLC9A3P48764 834 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 MRPS6P82932 125 aaKnown RBP10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 CLCA4Q14CN2 919 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 PCSK7Q16549 785 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 UGP2Q16851 508 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 FBXO47Q5MNV8 452 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 TPRG1LQ5T0D9 272 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 FAM102BQ5T8I3 360 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 FAM160B1Q5W0V3 765 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 HEATR6Q6AI08 1181 aaKnown RBP10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 DENND1BQ6P3S1 775 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 CASC4Q6P4E1 433 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 TBPL2Q6SJ96 375 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 PARP16Q8N5Y8 322 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 PAF1Q8N7H5 531 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 ANKRD53Q8N9V6 530 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 BRSK1Q8TDC3 778 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 TMEM40Q8WWA1 233 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 IPCEF1Q8WWN9 437 aaPredicted RBP10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 LINC01599Q8WXQ3 324 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 TFAP2BQ92481 460 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 SLC38A4Q969I6 547 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 LRRC58Q96CX6 371 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 ZHX1-C8orf76Q96EF9 292 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 VPS39Q96JC1 886 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 ZNF578Q96N58 590 aaPredicted RBP10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 GPR78Q96P69 363 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 MBOAT4Q96T53 435 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 TOR3AQ9H497 397 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 PRDM6Q9NQX0 595 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 TAS2R9Q9NYW1 312 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 RCOR3Q9P2K3 495 aaPredicted RBP10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 MAGEL2Q9UJ55 1249 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 PCDHGA10Q9Y5H3 936 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 ATG2AQ2TAZ0 1938 aa10.49□□□□□ -0.73
NIF3L1-204ENST00000409357 ZCWPW2A0A1B0GU75 182 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 C12orf71A8MTZ7 269 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 PLK4O00444 970 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 INPP4BO15327 924 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 F9P00740 461 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 PSAPP07602 524 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 RPL17P18621 184 aaKnown RBP10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 HLA-DMAP28067 261 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 CD6P30203 668 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 CD52P31358 61 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 HTR2BP41595 481 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 HCAR3P49019 387 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 NPY2RP49146 381 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 GLUD2P49448 558 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 GSK3BP49841 420 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 IRF9Q00978 393 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 PRKCEQ02156 737 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 PTPRJQ12913 1337 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 DPYSL2Q16555 572 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 AAK1Q2M2I8 961 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 CTU2Q2VPK5 515 aaKnown RBP10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 TMEM236Q5W0B7 351 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 ZNF470Q6ECI4 717 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 SLC26A9Q7LBE3 791 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 ZDHHC13Q8IUH4 622 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 DCP1BQ8IZD4 617 aaKnown RBP10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 CADM2Q8N3J6 435 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 FSTL5Q8N475 847 aaPredicted RBP10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 TXNDC5Q8NBS9 432 aaKnown RBP10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 AGR3Q8TD06 166 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 HTR3CQ8WXA8 447 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 SLC7A6Q92536 515 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 TBC1D20Q96BZ9 403 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 BIRC7Q96CA5 298 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 PDLIM5Q96HC4 596 aaKnown RBP10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 SIGLEC11Q96RL6 698 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 ACAT2Q9BWD1 397 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 KIAA1671Q9BY89 1806 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 ALOXE3Q9BYJ1 711 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 DCSTAMPQ9H295 470 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 SLC52A3Q9NQ40 469 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 CHRAC1Q9NRG0 131 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 DNAJB9Q9UBS3 223 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 HMGXB4Q9UGU5 601 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 GINS2Q9Y248 185 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 BTBD3Q9Y2F9 522 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 ACOT9Q9Y305 439 aa10.48□□□□□ -0.73
NIF3L1-204ENST00000409357 A0A075B6Q4 140 aa10.47□□□□□ -0.73
NIF3L1-204ENST00000409357 A0A087X1B8 175 aa10.47□□□□□ -0.73
NIF3L1-204ENST00000409357 A0A0J9YYE9 177 aa10.47□□□□□ -0.73
NIF3L1-204ENST00000409357 LINC01553A4QN01 128 aa10.47□□□□□ -0.73
NIF3L1-204ENST00000409357 EFCAB9A8MZ26 197 aa10.47□□□□□ -0.73
NIF3L1-204ENST00000409357 TK2O00142 265 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms