RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 FEM1AQ9BSK4 669 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 C1QTNF1Q9BXJ1 281 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 H3BM21 787 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 STX16-NPEPL1H3BU86 382 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 STX16O14662 325 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 FAM189A1O60320 539 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 REM1O75628 298 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 IL1BP01584 269 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 CYP11A1P05108 521 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 C8GP07360 202 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 XRCC1P18887 633 aaPredicted RBP13.18□□□□□ -0.3
SNED1-205ENST00000405547 TM4SF1P30408 202 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 TCEAL1Q15170 157 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 GOLGA2P5Q9HBQ8 144 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 GMIPQ9P107 970 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 TAF1AQ15573 450 aaPredicted RBP13.18□□□□□ -0.3
SNED1-205ENST00000405547 SLC10A6Q3KNW5 377 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 FBXO43Q4G163 708 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 CCDC157Q569K6 752 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 SLC9A4Q6AI14 798 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 SIX5Q8N196 739 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 OR10H1Q9Y4A9 318 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 VNN1O95497 513 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 ANXA4P09525 319 aaPredicted RBP13.18□□□□□ -0.3
SNED1-205ENST00000405547 DLDP09622 509 aaKnown RBP13.18□□□□□ -0.3
SNED1-205ENST00000405547 EPGNQ6UW88 154 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 ANKRD46Q86W74 232 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 DCBLD1Q8N8Z6 715 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 CLEC4DQ8WXI8 215 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 NTAN1Q96AB6 310 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 SNX27Q96L92 541 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 FCRL5Q96RD9 977 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 INTS7Q9NVH2 962 aaKnown RBP13.18□□□□□ -0.3
SNED1-205ENST00000405547 CKLFQ9UBR5 152 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 GPD2P43304 727 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 RORCP51449 518 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 DAOAP59103 153 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 LARS2Q15031 903 aaKnown RBP13.18□□□□□ -0.3
SNED1-205ENST00000405547 ZNF282Q9UDV7 671 aaPredicted RBP13.18□□□□□ -0.3
SNED1-205ENST00000405547 ABCC6O95255 1503 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 ROBO1Q9Y6N7 1651 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 TCRBV7S3A2A0A539 114 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 TBX1O43435 398 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 OR4F21O95013 312 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 SLURP2P0DP57 97 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 ACADVLP49748 655 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 IRF9Q00978 393 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 MAP2K5Q13163 448 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 SDHAF4Q5VUM1 108 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 RASSF6Q6ZTQ3 369 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 OR52J3Q8NH60 311 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 CANT1Q8WVQ1 401 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 C7orf43Q8WVR3 580 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 TP53INP1Q96A56 240 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 HMCESQ96FZ2 354 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 FBXL18Q96ME1 805 aa13.18□□□□□ -0.3
SNED1-205ENST00000405547 HMX1Q9NP08 348 aaPredicted RBP13.18□□□□□ -0.3
SNED1-205ENST00000405547 EIF2B4Q9UI10 523 aaKnown RBP13.18□□□□□ -0.3
SNED1-205ENST00000405547 OAS3Q9Y6K5 1087 aaKnown RBP13.18□□□□□ -0.3
SNED1-205ENST00000405547 C9JVG2 144 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 H3BNH8 94 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 CCNDBP1O95273 360 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 IL1R2P27930 398 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 E2F2Q14209 437 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 CBX2Q14781 532 aaPredicted RBP13.17□□□□□ -0.3
SNED1-205ENST00000405547 PRAMEF19Q5SWL8 479 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 TRIM74Q86UV6 250 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 TRIM73Q86UV7 250 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 C9orf43Q8TAL5 461 aaPredicted RBP13.17□□□□□ -0.3
SNED1-205ENST00000405547 ZNF142P52746 1687 aaPredicted RBP13.17□□□□□ -0.3
SNED1-205ENST00000405547 A0A1B0GVM2 712 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 TCAF2A6NFQ2 919 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 NOS1APO75052 506 aaPredicted RBP13.17□□□□□ -0.3
SNED1-205ENST00000405547 PGLSO95336 258 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 PIGRP01833 764 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 CCR10P46092 362 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 RHDQ02161 417 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 TIGD6Q17RP2 521 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 KLHL22Q53GT1 634 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 PITRM1Q5JRX3 1037 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 C9orf64Q5T6V5 341 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 FAM46CQ5VWP2 391 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 RTL4Q6ZR62 310 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 SEC14L1Q92503 715 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 MCCC1Q96RQ3 725 aaPredicted RBP13.17□□□□□ -0.3
SNED1-205ENST00000405547 ZIM2Q9NZV7 527 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 FZD1Q9UP38 647 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 RIPK3Q9Y572 518 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 ACSL4O60488 711 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 UGT2B4P06133 528 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 NSG1P42857 185 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 CA9Q16790 459 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.17□□□□□ -0.3
SNED1-205ENST00000405547 ZNF516Q92618 1163 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 TTPALQ9BTX7 342 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 RHBGQ9H310 441 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 ANKRA2Q9H9E1 313 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 NECTIN3Q9NQS3 549 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 MAP4K5Q9Y4K4 846 aa13.17□□□□□ -0.3
SNED1-205ENST00000405547 CXorf49A8MYA2 514 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms