RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 SNX3O60493 162 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 POP7O75817 140 aaKnown RBP3.64□□□□□ -1.83
RTN4-208ENST00000404909 TROVE2P10155 538 aaKnown RBP eCLIP3.64□□□□□ -1.83
RTN4-208ENST00000404909 MTHFD2P13995 350 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 PDHA2P29803 388 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 IGFALSP35858 605 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 ARL1P40616 181 aaPredicted RBP3.64□□□□□ -1.83
RTN4-208ENST00000404909 PRLHRP49683 370 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 AGTR2P50052 363 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 HK3P52790 923 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 PRKAA2P54646 552 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 OCRLQ01968 901 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 ASPHQ12797 758 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 MTAPQ13126 283 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 PHKG1Q16816 387 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 ARL13AQ5H913 290 aaPredicted RBP3.64□□□□□ -1.83
RTN4-208ENST00000404909 MBOAT1Q6ZNC8 495 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 ATG14Q6ZNE5 492 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 CHST15Q7LFX5 561 aaPredicted RBP3.64□□□□□ -1.83
RTN4-208ENST00000404909 RD3Q7Z3Z2 195 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 ADAMTSL2Q86TH1 951 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 SLC22A9Q8IVM8 553 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 ZNF547Q8IVP9 402 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 UBALD2Q8IYN6 164 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 ANKS4BQ8N8V4 417 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 TP53I13Q8NBR0 393 aaPredicted RBP3.64□□□□□ -1.83
RTN4-208ENST00000404909 OR2T34Q8NGX1 318 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 RAB3IL1Q8TBN0 382 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 FOXJ1Q92949 421 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 CCDC126Q96EE4 140 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 PPP1R36Q96LQ0 422 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 FAM126AQ9BYI3 521 aaPredicted RBP3.64□□□□□ -1.83
RTN4-208ENST00000404909 TRIM55Q9BYV6 548 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 C6orf106Q9H6K1 298 aaPredicted RBP3.64□□□□□ -1.83
RTN4-208ENST00000404909 MRPL40Q9NQ50 206 aaKnown RBP3.64□□□□□ -1.83
RTN4-208ENST00000404909 SIT1Q9Y3P8 196 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 PCYT1BQ9Y5K3 369 aaPredicted RBP3.64□□□□□ -1.83
RTN4-208ENST00000404909 C19orf67A6NJJ6 358 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 CHURC1-FNTBB4DL54 471 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 CACNB4O00305 520 aaPredicted RBP3.64□□□□□ -1.83
RTN4-208ENST00000404909 KPNA5O15131 536 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 VEGFDO43915 354 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 SNNO75324 88 aaPredicted RBP3.64□□□□□ -1.83
RTN4-208ENST00000404909 S100BP04271 92 aaPredicted RBP3.64□□□□□ -1.83
RTN4-208ENST00000404909 RPL10P27635 214 aaKnown RBP3.64□□□□□ -1.83
RTN4-208ENST00000404909 EEF1DP29692 281 aaKnown RBP3.64□□□□□ -1.83
RTN4-208ENST00000404909 RCN2Q14257 317 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 NFE2L1Q14494 772 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 ZSCAN26Q16670 478 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 C18orf21Q32NC0 220 aaPredicted RBP3.64□□□□□ -1.83
RTN4-208ENST00000404909 MAP7D1Q3KQU3 841 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 PLEKHS1Q5SXH7 462 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 NEK5Q6P3R8 708 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 SBSNQ6UWP8 590 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 UBE2R2Q712K3 238 aaPredicted RBP3.64□□□□□ -1.83
RTN4-208ENST00000404909 PIGWQ7Z7B1 504 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 NLRP8Q86W28 1048 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 ZNF781Q8N8C0 355 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 CCDC197Q8NCU1 140 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 PJA1Q8NG27 643 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 RFWD2Q8NHY2 731 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 DLG3Q92796 817 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 FAM131CQ96AQ9 280 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 PDLIM5Q96HC4 596 aaKnown RBP3.64□□□□□ -1.83
RTN4-208ENST00000404909 C7orf26Q96N11 449 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 ASB2Q96Q27 587 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 SORT1Q99523 831 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 OSGEPL1Q9H4B0 414 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 SGK2Q9HBY8 427 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 ABCF3Q9NUQ8 709 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 PNPOQ9NVS9 261 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 ARL15Q9NXU5 204 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 KLHL14Q9P2G3 628 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 PSMD13Q9UNM6 376 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 GPSM3Q9Y4H4 160 aa3.64□□□□□ -1.83
RTN4-208ENST00000404909 H3BM21 787 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 EBAG9O00559 213 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 PPP6CO00743 305 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 FPGTO14772 594 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 FFAR2O15552 330 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 GRID2O43424 1007 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 NUAK1O60285 661 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 H2AFYO75367 372 aaKnown RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 PDGFBP01127 241 aaPredicted RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 HIST1H2AGP0C0S8 130 aaPredicted RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 CBSLP0DN79 551 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 MYCLP1P12525 358 aaPredicted RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 ACP5P13686 325 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 ENO3P13929 434 aaPredicted RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 VCLP18206 1134 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 HIST1H2ADP20671 130 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 IMPDH1P20839 514 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 MPSTP25325 297 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 CD6P30203 668 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 CBSP35520 551 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 TRIM23P36406 574 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 RPIAP49247 311 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 AQP5P55064 265 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 HERVK_113P63132 956 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 ZNF678Q5SXM1 525 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms