RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 SPNS2Q8IVW8 549 aa20.64■□□□□ 0.9
TPM1-208ENST00000404484 FBXO39Q8N4B4 442 aa20.64■□□□□ 0.9
TPM1-208ENST00000404484 OR14C36Q8NHC7 312 aa20.64■□□□□ 0.9
TPM1-208ENST00000404484 PHF21BQ96EK2 531 aa20.64■□□□□ 0.9
TPM1-208ENST00000404484 TMEM237Q96Q45 408 aa20.64■□□□□ 0.9
TPM1-208ENST00000404484 ERVK-6Q9BXR3 956 aa20.64■□□□□ 0.9
TPM1-208ENST00000404484 C20orf27Q9GZN8 174 aa20.64■□□□□ 0.9
TPM1-208ENST00000404484 KDM4CQ9H3R0 1056 aa20.64■□□□□ 0.9
TPM1-208ENST00000404484 EML4Q9HC35 981 aaKnown RBP20.64■□□□□ 0.9
TPM1-208ENST00000404484 NUDT4Q9NZJ9 180 aa20.64■□□□□ 0.9
TPM1-208ENST00000404484 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.64■□□□□ 0.9
TPM1-208ENST00000404484 RAP2CQ9Y3L5 183 aa20.64■□□□□ 0.9
TPM1-208ENST00000404484 STX16-NPEPL1H3BU86 382 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 STX16O14662 325 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 AXIN1O15169 862 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 VEGFDO43915 354 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 SNX2O60749 519 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 CCR7P32248 378 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 ARFIP2P53365 341 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 ADPRHP54922 357 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 BCL7AQ4VC05 210 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 KHDC1Q4VXA5 237 aaKnown RBP20.63■□□□□ 0.89
TPM1-208ENST00000404484 ANO7Q6IWH7 933 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 FOXR1Q6PIV2 292 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 PTGR2Q8N8N7 351 aaPredicted RBP20.63■□□□□ 0.89
TPM1-208ENST00000404484 RASGEF1AQ8N9B8 481 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 ASZ1Q8WWH4 475 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 THOC1Q96FV9 657 aaKnown RBP20.63■□□□□ 0.89
TPM1-208ENST00000404484 HIC2Q96JB3 615 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 STN1Q9H668 368 aaKnown RBP20.63■□□□□ 0.89
TPM1-208ENST00000404484 ZNF395Q9H8N7 513 aaPredicted RBP20.63■□□□□ 0.89
TPM1-208ENST00000404484 TRIM39Q9HCM9 518 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 DCTN4Q9UJW0 460 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 A0A0G2JND7 137 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 RAD51BO15315 384 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 KLK8O60259 260 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 NUAK1O60285 661 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 GFRA3O60609 400 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 DCTN3O75935 186 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 CDK14O94921 469 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 S100BP04271 92 aaPredicted RBP20.63■□□□□ 0.89
TPM1-208ENST00000404484 MPC1LP0DKB6 136 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 MTHFD2P13995 350 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 HOXD11P31277 338 aaPredicted RBP20.63■□□□□ 0.89
TPM1-208ENST00000404484 CNR2P34972 360 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 GALNT1Q10472 559 aaPredicted RBP20.63■□□□□ 0.89
TPM1-208ENST00000404484 SGCGQ13326 291 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 GBX1Q14549 363 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 PNCKQ6P2M8 343 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 C6orf89Q6UWU4 347 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 NEK10Q6ZWH5 1172 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 RFWD2Q8NHY2 731 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 NAT14Q8WUY8 206 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 ELMO1Q92556 727 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 MRGPRX1Q96LB2 322 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 POLMQ9NP87 494 aaPredicted RBP20.63■□□□□ 0.89
TPM1-208ENST00000404484 HAO1Q9UJM8 370 aa20.63■□□□□ 0.89
TPM1-208ENST00000404484 ATXN2Q99700 1313 aaKnown RBP20.62■□□□□ 0.89
TPM1-208ENST00000404484 SLCO1B7G3V0H7 640 aa20.62■□□□□ 0.89
TPM1-208ENST00000404484 K7ESM1 405 aa20.62■□□□□ 0.89
TPM1-208ENST00000404484 SGTAO43765 313 aa20.62■□□□□ 0.89
TPM1-208ENST00000404484 ALDH18A1P54886 795 aaKnown RBP20.62■□□□□ 0.89
TPM1-208ENST00000404484 DMTNQ08495 405 aa20.62■□□□□ 0.89
TPM1-208ENST00000404484 IFT88Q13099 833 aa20.62■□□□□ 0.89
TPM1-208ENST00000404484 PFKFB4Q16877 469 aa20.62■□□□□ 0.89
TPM1-208ENST00000404484 ARL13AQ5H913 290 aaPredicted RBP20.62■□□□□ 0.89
TPM1-208ENST00000404484 ZNF678Q5SXM1 525 aa20.62■□□□□ 0.89
TPM1-208ENST00000404484 SEL1L3Q68CR1 1132 aa20.62■□□□□ 0.89
TPM1-208ENST00000404484 KIAA1324Q6UXG2 1013 aaKnown RBP20.62■□□□□ 0.89
TPM1-208ENST00000404484 FRMD7Q6ZUT3 714 aa20.62■□□□□ 0.89
TPM1-208ENST00000404484 AFAP1L2Q8N4X5 818 aa20.62■□□□□ 0.89
TPM1-208ENST00000404484 CCM2Q9BSQ5 444 aa20.62■□□□□ 0.89
TPM1-208ENST00000404484 C1QTNF2Q9BXJ5 285 aa20.62■□□□□ 0.89
TPM1-208ENST00000404484 WWP1Q9H0M0 922 aa20.62■□□□□ 0.89
TPM1-208ENST00000404484 CD274Q9NZQ7 290 aa20.62■□□□□ 0.89
TPM1-208ENST00000404484 IKZF3Q9UKT9 509 aa20.62■□□□□ 0.89
TPM1-208ENST00000404484 OARD1Q9Y530 152 aa20.62■□□□□ 0.89
TPM1-208ENST00000404484 TRPM6Q9BX84 2022 aa20.62■□□□□ 0.89
TPM1-208ENST00000404484 GVINP1Q7Z2Y8 2422 aa20.61■□□□□ 0.89
TPM1-208ENST00000404484 TCRBV21S2A2A0A5A6 115 aa20.61■□□□□ 0.89
TPM1-208ENST00000404484 OR2AG2A6NM03 316 aa20.61■□□□□ 0.89
TPM1-208ENST00000404484 RNGTTO60942 597 aaKnown RBP20.61■□□□□ 0.89
TPM1-208ENST00000404484 KIAA0754O94854 1291 aa20.61■□□□□ 0.89
TPM1-208ENST00000404484 PCCBP05166 539 aa20.61■□□□□ 0.89
TPM1-208ENST00000404484 KITP10721 976 aa20.61■□□□□ 0.89
TPM1-208ENST00000404484 ARRB2P32121 409 aa20.61■□□□□ 0.89
TPM1-208ENST00000404484 MAPK9P45984 424 aa20.61■□□□□ 0.89
TPM1-208ENST00000404484 HSPA14Q0VDF9 509 aa20.61■□□□□ 0.89
TPM1-208ENST00000404484 BOP1Q14137 746 aaKnown RBP20.61■□□□□ 0.89
TPM1-208ENST00000404484 SIM2Q14190 667 aaPredicted RBP20.61■□□□□ 0.89
TPM1-208ENST00000404484 SETDB1Q15047 1291 aa20.61■□□□□ 0.89
TPM1-208ENST00000404484 TGFBIQ15582 683 aa20.61■□□□□ 0.89
TPM1-208ENST00000404484 WSCD2Q2TBF2 565 aa20.61■□□□□ 0.89
TPM1-208ENST00000404484 SYTL3Q4VX76 610 aa20.61■□□□□ 0.89
TPM1-208ENST00000404484 TMEM259Q4ZIN3 620 aa20.61■□□□□ 0.89
TPM1-208ENST00000404484 SBSNQ6UWP8 590 aa20.61■□□□□ 0.89
TPM1-208ENST00000404484 HORMAD1Q86X24 394 aa20.61■□□□□ 0.89
TPM1-208ENST00000404484 ASB12Q8WXK4 309 aa20.61■□□□□ 0.89
TPM1-208ENST00000404484 COX14Q96I36 57 aa20.61■□□□□ 0.89
TPM1-208ENST00000404484 TMEM120AQ9BXJ8 343 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms