RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 GRIK2Q13002 908 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 AIMP2Q13155 320 aaKnown RBP4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 MYBPHQ13203 477 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 ZNF805Q5CZA5 627 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 CCDC158Q5M9N0 1113 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 RGMBQ6NW40 437 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 ENOSF1Q7L5Y1 443 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 CACNA2D4Q7Z3S7 1137 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 TSPAN33Q86UF1 283 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 CHERPQ8IWX8 916 aaKnown RBP4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 SMRP1Q8NCR6 262 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 CSNK2A3Q8NEV1 391 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 PHF21BQ96EK2 531 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 C3orf30Q96M34 536 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 NEUROD6Q96NK8 337 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 FIZ1Q96SL8 496 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 NUDT16L1Q9BRJ7 211 aaKnown RBP4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 SEZ6LQ9BYH1 1024 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 C1RLQ9NZP8 487 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 PADI3Q9ULW8 664 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 SCN9AQ15858 1988 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 MAST2Q6P0Q8 1798 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 RFX7Q2KHR2 1363 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 MED23Q9ULK4 1368 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 CDK5RAP2Q96SN8 1893 aa4.9□□□□□ -1.62
HMGB3P19-201ENST00000403971 KDM4BO94953 1096 aa4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 PGM3O95394 542 aa4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 CLDN14O95500 239 aa4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 AFPP02771 609 aaKnown RBP4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 PON1P27169 355 aa4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 MFAP4P55083 255 aa4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 LTBQ06643 244 aa4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 FOXM1Q08050 763 aa4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 PCGF3Q3KNV8 242 aa4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 ATP13A5Q4VNC0 1218 aa4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 KCNT1Q5JUK3 1230 aa4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 PLEKHS1Q5SXH7 462 aa4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 NSUN5P2Q63ZY6 315 aa4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 NRROSQ86YC3 692 aa4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 TAGAPQ8N103 731 aa4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 IQCF1Q8N6M8 205 aa4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 ZNF114Q8NC26 417 aa4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 C1orf131Q8NDD1 294 aaKnown RBP4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 ACVR1CQ8NER5 493 aa4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 HM13Q8TCT9 377 aa4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 ELP5Q8TE02 316 aa4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 WFIKKN2Q8TEU8 576 aa4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 DUSP19Q8WTR2 217 aa4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 ZNF622Q969S3 477 aaKnown RBP eCLIP4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 SAT2Q96F10 170 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 VPS33BQ9H267 617 aa4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 IL25Q9H293 177 aa4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 FBXW11Q9UKB1 542 aa4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 ACSL5Q9ULC5 683 aa4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 CMAHPQ9Y471 501 aa4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 PDS5AQ29RF7 1337 aaKnown RBP4.9□□□□□ -1.63
HMGB3P19-201ENST00000403971 FOCADQ5VW36 1801 aa4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 ECM29Q5VYK3 1845 aa4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 A0A1W2PR77 199 aa4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 CDRT15L2A8MXV6 281 aa4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 B4DLN1 442 aa4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 HIP1O00291 1037 aa4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 CTDSP2O14595 271 aa4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 SMAD6O43541 496 aaKnown RBP4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 BEST1O76090 585 aa4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 SELLP14151 372 aa4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 DPEP1P16444 411 aa4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 ADORA1P30542 326 aa4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 APOBEC1P41238 236 aaKnown RBP4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 SLC15A1P46059 708 aa4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 MRPL12P52815 198 aaKnown RBP4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 TAS2R38P59533 333 aa4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 SEC61BP60468 96 aaKnown RBP4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 EGR4Q05215 589 aa4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 EPS8Q12929 822 aa4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 OASLQ15646 514 aaKnown RBP4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 CAVIN4Q5BKX8 364 aa4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 DCST1Q5T197 706 aa4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 LINC00346Q8IVM7 164 aa4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 OR1J2Q8NGS2 313 aa4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 SPATA22Q8NHS9 363 aa4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 TBC1D16Q8TBP0 767 aa4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 MTBPQ96DY7 904 aa4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 FAM84BQ96KN1 310 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 SMC6Q96SB8 1091 aa4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 ZPBPQ9BS86 351 aa4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 EPB41L5Q9HCM4 733 aa4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 STK39Q9UEW8 545 aa4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 RPS6KA6Q9UK32 745 aa4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 KCNS2Q9ULS6 477 aa4.89□□□□□ -1.63
HMGB3P19-201ENST00000403971 A0A0G2JLW4 131 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 A8MV72 311 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 MID1O15344 667 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 SPINT2O43291 252 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 PLPP2O43688 288 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 ENTPD3O75355 529 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 GPC4O75487 556 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 DAB1O75553 588 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 UFL1O94874 794 aa4.88□□□□□ -1.63
HMGB3P19-201ENST00000403971 HIST1H2ABP04908 130 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms