RNA–Protein interactions for RNA: ENST00000402738.5

HERC3-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-202ENST00000402738 DPY19L3Q6ZPD9 716 aa9.67□□□□□ -0.86
HERC3-202ENST00000402738 COL26A1Q96A83 441 aa9.67□□□□□ -0.86
HERC3-202ENST00000402738 IL4I1Q96RQ9 567 aa9.67□□□□□ -0.86
HERC3-202ENST00000402738 ARHGEF4Q9NR80 690 aa9.67□□□□□ -0.86
HERC3-202ENST00000402738 TMPRSS4Q9NRS4 437 aa9.67□□□□□ -0.86
HERC3-202ENST00000402738 STOX2Q9P2F5 926 aaPredicted RBP9.67□□□□□ -0.86
HERC3-202ENST00000402738 PPIEQ9UNP9 301 aaKnown RBP9.67□□□□□ -0.86
HERC3-202ENST00000402738 TCAF1Q9Y4C2 921 aa9.67□□□□□ -0.86
HERC3-202ENST00000402738 MAP4K5Q9Y4K4 846 aa9.67□□□□□ -0.86
HERC3-202ENST00000402738 MAB21L2Q9Y586 359 aa9.67□□□□□ -0.86
HERC3-202ENST00000402738 REM1O75628 298 aa9.67□□□□□ -0.86
HERC3-202ENST00000402738 RECQL4O94761 1208 aa9.67□□□□□ -0.86
HERC3-202ENST00000402738 PRKAR2AP13861 404 aaKnown RBP9.67□□□□□ -0.86
HERC3-202ENST00000402738 LPOP22079 712 aaPredicted RBP9.67□□□□□ -0.86
HERC3-202ENST00000402738 CSTF2P33240 577 aaKnown RBP eCLIP9.67□□□□□ -0.86
HERC3-202ENST00000402738 SNRPD2P62316 118 aaKnown RBP9.67□□□□□ -0.86
HERC3-202ENST00000402738 CEACAM7Q14002 265 aa9.67□□□□□ -0.86
HERC3-202ENST00000402738 GRIK5Q16478 980 aa9.67□□□□□ -0.86
HERC3-202ENST00000402738 GCNT6Q5T4J0 391 aa9.67□□□□□ -0.86
HERC3-202ENST00000402738 ADGRD2Q7Z7M1 963 aa9.67□□□□□ -0.86
HERC3-202ENST00000402738 ZNF615Q8N8J6 731 aa9.67□□□□□ -0.86
HERC3-202ENST00000402738 REPS2Q8NFH8 660 aa9.67□□□□□ -0.86
HERC3-202ENST00000402738 OR10Q1Q8NGQ4 319 aa9.67□□□□□ -0.86
HERC3-202ENST00000402738 C9orf43Q8TAL5 461 aaPredicted RBP9.67□□□□□ -0.86
HERC3-202ENST00000402738 NDRG1Q92597 394 aaKnown RBP9.67□□□□□ -0.86
HERC3-202ENST00000402738 KAT2AQ92830 837 aa9.67□□□□□ -0.86
HERC3-202ENST00000402738 LENG9Q96B70 501 aa9.67□□□□□ -0.86
HERC3-202ENST00000402738 AURKBQ96GD4 344 aaPredicted RBP9.67□□□□□ -0.86
HERC3-202ENST00000402738 CRELD1Q96HD1 420 aa9.67□□□□□ -0.86
HERC3-202ENST00000402738 MRPL9Q9BYD2 267 aaKnown RBP9.67□□□□□ -0.86
HERC3-202ENST00000402738 KCNN2Q9H2S1 579 aa9.67□□□□□ -0.86
HERC3-202ENST00000402738 BCAS3Q9H6U6 928 aa9.67□□□□□ -0.86
HERC3-202ENST00000402738 ELAC1Q9H777 363 aaKnown RBP9.67□□□□□ -0.86
HERC3-202ENST00000402738 ABCC13Q9NSE7 274 aa9.67□□□□□ -0.86
HERC3-202ENST00000402738 POLR1DQ9Y2S0 133 aa9.67□□□□□ -0.86
HERC3-202ENST00000402738 TEX264Q9Y6I9 313 aa9.67□□□□□ -0.86
HERC3-202ENST00000402738 M0R233 179 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 NKRFO15226 690 aaKnown RBP eCLIP9.66□□□□□ -0.86
HERC3-202ENST00000402738 DLX3O60479 287 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 POMCP01189 267 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 RPL3P39023 403 aaKnown RBP9.66□□□□□ -0.86
HERC3-202ENST00000402738 HSPA7P48741 367 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 CCR4P51679 360 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 PCDH1Q08174 1060 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 LAPTM4AQ15012 233 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 UAP1L1Q3KQV9 507 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 STRADAQ7RTN6 431 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 GAB3Q8WWW8 586 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 RAD51AP1Q96B01 352 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 TP63Q9H3D4 680 aaPredicted RBP9.66□□□□□ -0.86
HERC3-202ENST00000402738 FBXO44Q9H4M3 255 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 BEX1Q9HBH7 125 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 TREM1Q9NP99 234 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 SMOXQ9NWM0 555 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 SEC14L3Q9UDX4 400 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 KIF20BQ96Q89 1820 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 B4GALT5O43286 388 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 FGF3P11487 239 aaPredicted RBP9.66□□□□□ -0.86
HERC3-202ENST00000402738 ITPKAP23677 461 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 ADRA1BP35368 520 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 GUCA1AP43080 201 aaPredicted RBP9.66□□□□□ -0.86
HERC3-202ENST00000402738 SH3PXD2AQ5TCZ1 1133 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 EEF1DP3Q658K8 133 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 FAM91A1Q658Y4 838 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 SLC2A7Q6PXP3 512 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 IGDCC3Q8IVU1 814 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 SLC15A3Q8IY34 581 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 SMG7Q92540 1137 aaKnown RBP9.66□□□□□ -0.86
HERC3-202ENST00000402738 ZNF641Q96N77 438 aaPredicted RBP9.66□□□□□ -0.86
HERC3-202ENST00000402738 ELOVL4Q9GZR5 314 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 USP29Q9HBJ7 922 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 AAASQ9NRG9 546 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 DMAC2Q9NW81 257 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 SMPD4Q9NXE4 827 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.66□□□□□ -0.86
HERC3-202ENST00000402738 C17orf102A2RUQ5 167 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 OR2AT4A6NND4 320 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 ISM1B1AKI9 464 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 MT-CYBP00156 380 aaPredicted RBP9.66□□□□□ -0.86
HERC3-202ENST00000402738 FGF1P05230 155 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 CKMP06732 381 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 GNAO1P09471 354 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 OPRL1P41146 370 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 HNMTP50135 292 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 KCNJ11Q14654 390 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 NFE2Q16621 373 aaPredicted RBP9.66□□□□□ -0.86
HERC3-202ENST00000402738 CELF3Q5SZQ8 465 aaKnown RBP9.66□□□□□ -0.86
HERC3-202ENST00000402738 ULK3Q6PHR2 472 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 HAGHLQ6PII5 290 aaPredicted RBP9.66□□□□□ -0.86
HERC3-202ENST00000402738 ZNF730Q6ZMV8 503 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 ABHD11Q8NFV4 315 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 OR10G2Q8NGC3 310 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 COQ8AQ8NI60 647 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 CNIH3Q8TBE1 160 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 TRIM43Q96BQ3 446 aaPredicted RBP9.66□□□□□ -0.86
HERC3-202ENST00000402738 HAVCR1Q96D42 359 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 QRFPRQ96P65 431 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 FUNDC2Q9BWH2 189 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 DUSP16Q9BY84 665 aa9.66□□□□□ -0.86
HERC3-202ENST00000402738 PIM2Q9P1W9 311 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms