RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 DOK6Q6PKX4 331 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 ZNF557Q8N988 423 aaPredicted RBP18.25■□□□□ 0.51
USP48-204ENST00000400301 PYCR2Q96C36 320 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 OR2AG2A6NM03 316 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 CXCR6O00574 342 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 COL6A1P12109 1028 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 CHIT1Q13231 466 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 NAE1Q13564 534 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 CHRNA6Q15825 494 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 PAGE2BQ5JRK9 111 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 C6orf136Q5SQH8 315 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 PARP8Q8N3A8 854 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 GLB1L3Q8NCI6 653 aaPredicted RBP18.25■□□□□ 0.51
USP48-204ENST00000400301 PTERQ96BW5 349 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 RBM4BQ9BQ04 359 aaKnown RBP18.25■□□□□ 0.51
USP48-204ENST00000400301 RBM4Q9BWF3 364 aaKnown RBP18.25■□□□□ 0.51
USP48-204ENST00000400301 TRPC4Q9UBN4 977 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 SAMD4AQ9UPU9 718 aaKnown RBP18.25■□□□□ 0.51
USP48-204ENST00000400301 CLDN7O95471 211 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 IL6P05231 212 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 ADH1AP07327 375 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 TMED10P49755 219 aaKnown RBP18.25■□□□□ 0.51
USP48-204ENST00000400301 CYP4F8P98187 520 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 MAPK11Q15759 364 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 CNTN4Q8IWV2 1026 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 TCAIMQ8N3R3 496 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 GSTO2Q9H4Y5 243 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 NUP205Q92621 2012 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 RGS5O15539 181 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 CLIC3O95833 236 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 PABPC4LP0CB38 370 aaKnown RBP18.25■□□□□ 0.51
USP48-204ENST00000400301 HOXD8P13378 290 aaPredicted RBP18.25■□□□□ 0.51
USP48-204ENST00000400301 VARSP26640 1264 aaKnown RBP18.25■□□□□ 0.51
USP48-204ENST00000400301 PPP1R8Q12972 351 aaKnown RBP18.25■□□□□ 0.51
USP48-204ENST00000400301 PSAPL1Q6NUJ1 521 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 KCTD8Q6ZWB6 473 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 GOLGA7Q7Z5G4 137 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 ARL10Q8N8L6 244 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 AUTS2Q8WXX7 1259 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 CD320Q9NPF0 282 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 ACTL7AQ9Y615 435 aa18.25■□□□□ 0.51
USP48-204ENST00000400301 COCHO43405 550 aa18.24■□□□□ 0.51
USP48-204ENST00000400301 MAN1A2O60476 641 aa18.24■□□□□ 0.51
USP48-204ENST00000400301 CXCL14O95715 111 aa18.24■□□□□ 0.51
USP48-204ENST00000400301 GALTP07902 379 aa18.24■□□□□ 0.51
USP48-204ENST00000400301 CYBAP13498 195 aa18.24■□□□□ 0.51
USP48-204ENST00000400301 YAP1P46937 504 aaKnown RBP18.24■□□□□ 0.51
USP48-204ENST00000400301 ARCN1P48444 511 aaKnown RBP18.24■□□□□ 0.51
USP48-204ENST00000400301 FAM81AQ8TBF8 368 aa18.24■□□□□ 0.51
USP48-204ENST00000400301 ACDQ96AP0 544 aa18.24■□□□□ 0.51
USP48-204ENST00000400301 ZUFSPQ96AP4 578 aa18.24■□□□□ 0.51
USP48-204ENST00000400301 FAM83DQ9H4H8 585 aa18.24■□□□□ 0.51
USP48-204ENST00000400301 GRM6O15303 877 aa18.24■□□□□ 0.51
USP48-204ENST00000400301 TRBC1P01850 177 aa18.24■□□□□ 0.51
USP48-204ENST00000400301 PWP1Q13610 501 aa18.24■□□□□ 0.51
USP48-204ENST00000400301 DGUOKQ16854 277 aa18.24■□□□□ 0.51
USP48-204ENST00000400301 SYVN1Q86TM6 617 aa18.24■□□□□ 0.51
USP48-204ENST00000400301 BBS7Q8IWZ6 715 aa18.24■□□□□ 0.51
USP48-204ENST00000400301 ATAD3AQ9NVI7 634 aa18.24■□□□□ 0.51
USP48-204ENST00000400301 SRRDQ9UH36 339 aa18.24■□□□□ 0.51
USP48-204ENST00000400301 QSOX1O00391 747 aa18.24■□□□□ 0.51
USP48-204ENST00000400301 HIPK1Q86Z02 1210 aa18.24■□□□□ 0.51
USP48-204ENST00000400301 BIRC7Q96CA5 298 aa18.24■□□□□ 0.51
USP48-204ENST00000400301 PLEKHA8Q96JA3 519 aa18.24■□□□□ 0.51
USP48-204ENST00000400301 EBPLQ9BY08 206 aa18.24■□□□□ 0.51
USP48-204ENST00000400301 RERGLQ9H628 205 aa18.24■□□□□ 0.51
USP48-204ENST00000400301 FANCEQ9HB96 536 aa18.24■□□□□ 0.51
USP48-204ENST00000400301 HMG20AQ9NP66 347 aa18.24■□□□□ 0.51
USP48-204ENST00000400301 KRT84Q9NSB2 600 aa18.24■□□□□ 0.51
USP48-204ENST00000400301 PCDHGA7Q9Y5G6 932 aa18.24■□□□□ 0.51
USP48-204ENST00000400301 TMEM88BA6NKF7 163 aa18.23■□□□□ 0.51
USP48-204ENST00000400301 NOBOXO60393 691 aa18.23■□□□□ 0.51
USP48-204ENST00000400301 FGD3Q5JSP0 725 aa18.23■□□□□ 0.51
USP48-204ENST00000400301 KATNBL1Q9H079 304 aa18.23■□□□□ 0.51
USP48-204ENST00000400301 PCDH8O95206 1070 aa18.23■□□□□ 0.51
USP48-204ENST00000400301 EFNA1P20827 205 aaPredicted RBP18.23■□□□□ 0.51
USP48-204ENST00000400301 NR4A1P22736 598 aa18.23■□□□□ 0.51
USP48-204ENST00000400301 PPM1AP35813 382 aa18.23■□□□□ 0.51
USP48-204ENST00000400301 RTP2Q5QGT7 225 aa18.23■□□□□ 0.51
USP48-204ENST00000400301 TMEM30AQ9NV96 361 aa18.23■□□□□ 0.51
USP48-204ENST00000400301 CDH1P12830 882 aa18.23■□□□□ 0.51
USP48-204ENST00000400301 DEFA1P59665 94 aa18.23■□□□□ 0.51
USP48-204ENST00000400301 DEFA3P59666 94 aa18.23■□□□□ 0.51
USP48-204ENST00000400301 GALNT1Q10472 559 aaPredicted RBP18.23■□□□□ 0.51
USP48-204ENST00000400301 DAG1Q14118 895 aa18.23■□□□□ 0.51
USP48-204ENST00000400301 GPR33Q49SQ1 333 aa18.23■□□□□ 0.51
USP48-204ENST00000400301 FNDC3BQ53EP0 1204 aaKnown RBP18.23■□□□□ 0.51
USP48-204ENST00000400301 OR52E8Q6IFG1 317 aa18.23■□□□□ 0.51
USP48-204ENST00000400301 CHST9Q7L1S5 443 aa18.23■□□□□ 0.51
USP48-204ENST00000400301 TRIM69Q86WT6 500 aa18.23■□□□□ 0.51
USP48-204ENST00000400301 ZC3H7AQ8IWR0 971 aaKnown RBP18.23■□□□□ 0.51
USP48-204ENST00000400301 RAVER1Q8IY67 606 aaKnown RBP18.23■□□□□ 0.51
USP48-204ENST00000400301 COLGALT2Q8IYK4 626 aa18.23■□□□□ 0.51
USP48-204ENST00000400301 SCML4Q8N228 414 aa18.23■□□□□ 0.51
USP48-204ENST00000400301 OR13J1Q8NGT2 312 aa18.23■□□□□ 0.51
USP48-204ENST00000400301 ZFAND2BQ8WV99 257 aa18.23■□□□□ 0.51
USP48-204ENST00000400301 MAGEB10Q96LZ2 347 aaPredicted RBP18.23■□□□□ 0.51
USP48-204ENST00000400301 CEP44Q9C0F1 390 aa18.23■□□□□ 0.51
USP48-204ENST00000400301 SGK2Q9HBY8 427 aa18.23■□□□□ 0.51
USP48-204ENST00000400301 ABCB8Q9NUT2 735 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms