RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 CFAP206Q8IYR0 622 aa17.31■□□□□ 0.36
CTNS-203ENST00000399306 ASZ1Q8WWH4 475 aa17.31■□□□□ 0.36
CTNS-203ENST00000399306 EPB41L1Q9H4G0 881 aa17.31■□□□□ 0.36
CTNS-203ENST00000399306 IL1RAPL1Q9NZN1 696 aa17.31■□□□□ 0.36
CTNS-203ENST00000399306 LRIT1Q9P2V4 623 aa17.31■□□□□ 0.36
CTNS-203ENST00000399306 CPNE7Q9UBL6 633 aa17.31■□□□□ 0.36
CTNS-203ENST00000399306 LILRA5A6NI73 299 aa17.3■□□□□ 0.36
CTNS-203ENST00000399306 RHPN2P1A8MT19 583 aa17.3■□□□□ 0.36
CTNS-203ENST00000399306 GPC4O75487 556 aa17.3■□□□□ 0.36
CTNS-203ENST00000399306 TCEA3O75764 348 aa17.3■□□□□ 0.36
CTNS-203ENST00000399306 SLU7O95391 586 aaKnown RBP17.3■□□□□ 0.36
CTNS-203ENST00000399306 APOA4P06727 396 aa17.3■□□□□ 0.36
CTNS-203ENST00000399306 SLC35G4P0C7Q5 338 aa17.3■□□□□ 0.36
CTNS-203ENST00000399306 AOAHP28039 575 aa17.3■□□□□ 0.36
CTNS-203ENST00000399306 TNFRSF8P28908 595 aa17.3■□□□□ 0.36
CTNS-203ENST00000399306 PBLDP30039 288 aaPredicted RBP17.3■□□□□ 0.36
CTNS-203ENST00000399306 ATP5DP30049 168 aa17.3■□□□□ 0.36
CTNS-203ENST00000399306 ECHS1P30084 290 aa17.3■□□□□ 0.36
CTNS-203ENST00000399306 CARSP49589 748 aaKnown RBP17.3■□□□□ 0.36
CTNS-203ENST00000399306 EPHA4P54764 986 aa17.3■□□□□ 0.36
CTNS-203ENST00000399306 EIF3BP55884 814 aaKnown RBP17.3■□□□□ 0.36
CTNS-203ENST00000399306 MAZP56270 477 aaKnown RBP17.3■□□□□ 0.36
CTNS-203ENST00000399306 HHEXQ03014 270 aa17.3■□□□□ 0.36
CTNS-203ENST00000399306 CTBP1Q13363 440 aa17.3■□□□□ 0.36
CTNS-203ENST00000399306 NAB1Q13506 487 aa17.3■□□□□ 0.36
CTNS-203ENST00000399306 TMED2Q15363 201 aa17.3■□□□□ 0.36
CTNS-203ENST00000399306 CTSL3PQ5NE16 218 aa17.3■□□□□ 0.36
CTNS-203ENST00000399306 HP1BP3Q5SSJ5 553 aaPredicted RBP17.3■□□□□ 0.36
CTNS-203ENST00000399306 PLEKHS1Q5SXH7 462 aa17.3■□□□□ 0.36
CTNS-203ENST00000399306 C3orf62Q6ZUJ4 267 aa17.3■□□□□ 0.36
CTNS-203ENST00000399306 IFT81Q8WYA0 676 aa17.3■□□□□ 0.36
CTNS-203ENST00000399306 ELMO1Q92556 727 aa17.3■□□□□ 0.36
CTNS-203ENST00000399306 CDKL2Q92772 493 aa17.3■□□□□ 0.36
CTNS-203ENST00000399306 KCNJ9Q92806 393 aa17.3■□□□□ 0.36
CTNS-203ENST00000399306 TMEM159Q96B96 161 aa17.3■□□□□ 0.36
CTNS-203ENST00000399306 OR52A5Q9H2C5 316 aa17.3■□□□□ 0.36
CTNS-203ENST00000399306 CCDC68Q9H2F9 335 aa17.3■□□□□ 0.36
CTNS-203ENST00000399306 ZFATQ9P243 1243 aa17.3■□□□□ 0.36
CTNS-203ENST00000399306 RNF215Q9Y6U7 377 aa17.3■□□□□ 0.36
CTNS-203ENST00000399306 CPED1A4D0V7 1026 aa17.29■□□□□ 0.36
CTNS-203ENST00000399306 IFRD1O00458 451 aaPredicted RBP17.29■□□□□ 0.36
CTNS-203ENST00000399306 SLCO2B1O94956 709 aa17.29■□□□□ 0.36
CTNS-203ENST00000399306 RPL10P27635 214 aaKnown RBP17.29■□□□□ 0.36
CTNS-203ENST00000399306 STX2P32856 288 aa17.29■□□□□ 0.36
CTNS-203ENST00000399306 SLC19A1P41440 591 aa17.29■□□□□ 0.36
CTNS-203ENST00000399306 GPLD1P80108 840 aa17.29■□□□□ 0.36
CTNS-203ENST00000399306 BIRC2Q13490 618 aa17.29■□□□□ 0.36
CTNS-203ENST00000399306 SLMAPQ14BN4 828 aa17.29■□□□□ 0.36
CTNS-203ENST00000399306 CLCA4Q14CN2 919 aa17.29■□□□□ 0.36
CTNS-203ENST00000399306 SMAD1Q15797 465 aaKnown RBP17.29■□□□□ 0.36
CTNS-203ENST00000399306 TRMT10BQ6PF06 316 aaKnown RBP17.29■□□□□ 0.36
CTNS-203ENST00000399306 RAB44Q7Z6P3 723 aaPredicted RBP17.29■□□□□ 0.36
CTNS-203ENST00000399306 CCDC25Q86WR0 208 aa17.29■□□□□ 0.36
CTNS-203ENST00000399306 UNC5BQ8IZJ1 945 aa17.29■□□□□ 0.36
CTNS-203ENST00000399306 GALNT15Q8N3T1 639 aa17.29■□□□□ 0.36
CTNS-203ENST00000399306 PNPLA1Q8N8W4 532 aa17.29■□□□□ 0.36
CTNS-203ENST00000399306 PATE1Q8WXA2 126 aa17.29■□□□□ 0.36
CTNS-203ENST00000399306 CCDC74AQ96AQ1 378 aa17.29■□□□□ 0.36
CTNS-203ENST00000399306 DPYSL5Q9BPU6 564 aa17.29■□□□□ 0.36
CTNS-203ENST00000399306 FUT8Q9BYC5 575 aa17.29■□□□□ 0.36
CTNS-203ENST00000399306 LRRC4CQ9HCJ2 640 aa17.29■□□□□ 0.36
CTNS-203ENST00000399306 FBXO6Q9NRD1 293 aaPredicted RBP17.29■□□□□ 0.36
CTNS-203ENST00000399306 SCHIP1Q9P0W5 487 aaPredicted RBP17.29■□□□□ 0.36
CTNS-203ENST00000399306 ZNF624Q9P2J8 865 aaPredicted RBP17.29■□□□□ 0.36
CTNS-203ENST00000399306 WDR37Q9Y2I8 494 aa17.29■□□□□ 0.36
CTNS-203ENST00000399306 CRYL1Q9Y2S2 319 aa17.29■□□□□ 0.36
CTNS-203ENST00000399306 EIF3FO00303 357 aaPredicted RBP17.28■□□□□ 0.36
CTNS-203ENST00000399306 NTN3O00634 580 aaPredicted RBP17.28■□□□□ 0.36
CTNS-203ENST00000399306 PPM1DO15297 605 aa17.28■□□□□ 0.36
CTNS-203ENST00000399306 OPA1O60313 960 aa17.28■□□□□ 0.36
CTNS-203ENST00000399306 HAUS5O94927 633 aa17.28■□□□□ 0.36
CTNS-203ENST00000399306 VIPP01282 170 aa17.28■□□□□ 0.36
CTNS-203ENST00000399306 AHSGP02765 367 aa17.28■□□□□ 0.36
CTNS-203ENST00000399306 RHOXF2BP0C7M4 288 aa17.28■□□□□ 0.36
CTNS-203ENST00000399306 MTHFD1P11586 935 aaKnown RBP17.28■□□□□ 0.36
CTNS-203ENST00000399306 SSTR1P30872 391 aa17.28■□□□□ 0.36
CTNS-203ENST00000399306 FMO4P31512 558 aa17.28■□□□□ 0.36
CTNS-203ENST00000399306 CCR7P32248 378 aa17.28■□□□□ 0.36
CTNS-203ENST00000399306 GPX6P59796 221 aa17.28■□□□□ 0.36
CTNS-203ENST00000399306 GBX1Q14549 363 aa17.28■□□□□ 0.36
CTNS-203ENST00000399306 RPE65Q16518 533 aa17.28■□□□□ 0.36
CTNS-203ENST00000399306 SYTL3Q4VX76 610 aa17.28■□□□□ 0.36
CTNS-203ENST00000399306 ZNF789Q5FWF6 425 aa17.28■□□□□ 0.36
CTNS-203ENST00000399306 PERM1Q5SV97 790 aa17.28■□□□□ 0.36
CTNS-203ENST00000399306 N4BP2L1Q5TBK1 243 aaPredicted RBP17.28■□□□□ 0.36
CTNS-203ENST00000399306 UGT3A1Q6NUS8 523 aa17.28■□□□□ 0.36
CTNS-203ENST00000399306 SPRED1Q7Z699 444 aa17.28■□□□□ 0.36
CTNS-203ENST00000399306 PDZD3Q86UT5 571 aa17.28■□□□□ 0.36
CTNS-203ENST00000399306 TMPRSS12Q86WS5 348 aa17.28■□□□□ 0.36
CTNS-203ENST00000399306 TRIM48Q8IWZ4 208 aa17.28■□□□□ 0.36
CTNS-203ENST00000399306 SLC22A15Q8IZD6 547 aa17.28■□□□□ 0.36
CTNS-203ENST00000399306 GRAMD1AQ96CP6 724 aa17.28■□□□□ 0.36
CTNS-203ENST00000399306 CXorf40BQ96DE9 158 aa17.28■□□□□ 0.36
CTNS-203ENST00000399306 CCDC3Q9BQI4 270 aa17.28■□□□□ 0.36
CTNS-203ENST00000399306 RHOXF2Q9BQY4 288 aa17.28■□□□□ 0.36
CTNS-203ENST00000399306 AARSD1Q9BTE6 412 aaKnown RBP17.28■□□□□ 0.36
CTNS-203ENST00000399306 WWP1Q9H0M0 922 aa17.28■□□□□ 0.36
CTNS-203ENST00000399306 SLC40A1Q9NP59 571 aa17.28■□□□□ 0.36
CTNS-203ENST00000399306 PPANQ9NQ55 473 aaKnown RBP17.28■□□□□ 0.36
CTNS-203ENST00000399306 CDYLQ9Y232 598 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms