RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 CYP2S1Q96SQ9 504 aa14.03□□□□□ -0.16
PCDHGA11-201ENST00000398587 TRIT1Q9H3H1 467 aaKnown RBP14.03□□□□□ -0.16
PCDHGA11-201ENST00000398587 MCM8Q9UJA3 840 aa14.03□□□□□ -0.16
PCDHGA11-201ENST00000398587 MRPS33Q9Y291 106 aaKnown RBP14.03□□□□□ -0.16
PCDHGA11-201ENST00000398587 WASF2Q9Y6W5 498 aa14.03□□□□□ -0.16
PCDHGA11-201ENST00000398587 KPNA4O00629 521 aaPredicted RBP14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 F7P08709 466 aaPredicted RBP14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 CCL5P13501 91 aa14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 AOC1P19801 751 aa14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 ERVK-21P61565 698 aa14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 SEMG2Q02383 582 aa14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 DGKKQ5KSL6 1271 aa14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 KLHL35Q6PF15 583 aa14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 FAM43BQ6ZT52 329 aaPredicted RBP14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 OR10T2Q8NGX3 314 aa14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 DGCR14Q96DF8 476 aaKnown RBP14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 NUAK2Q9H093 628 aa14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 EXD2Q9NVH0 621 aa14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 SMPD3Q9NY59 655 aaPredicted RBP14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 COL18A1P39060 1754 aa14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 LOC100506127A0A0U1RQW1 187 aa14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 LCHNA4D1U4 455 aa14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 WNT9AO14904 365 aa14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 PRKCGP05129 697 aa14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 IQCF3P0C7M6 154 aa14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 SLC10A2Q12908 348 aaPredicted RBP14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 MPP2Q14168 576 aa14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 CCDC157Q569K6 752 aa14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 C9orf64Q5T6V5 341 aa14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 EMC10Q5UCC4 262 aa14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 SAPCD2Q86UD0 394 aa14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 CBR4Q8N4T8 237 aa14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 C2orf73Q8N5S3 287 aaPredicted RBP14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 C2CD4AQ8NCU7 369 aaPredicted RBP14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 C19orf18Q8NEA5 215 aa14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 DNAJB8Q8NHS0 232 aa14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 PRICKLE1Q96MT3 831 aaPredicted RBP14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 RSL24D1Q9UHA3 163 aaKnown RBP14.02□□□□□ -0.16
PCDHGA11-201ENST00000398587 GJA1P17302 382 aa14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 NELFEP18615 380 aaKnown RBP14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 CCNA2P20248 432 aa14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 BUD31P41223 144 aaPredicted RBP14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 AP1S2P56377 157 aa14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 PCLAFQ15004 111 aa14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 CHRNA6Q15825 494 aa14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 C7orf61Q8IZ16 206 aa14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 PNPT1Q8TCS8 783 aaKnown RBP14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 IGSF21Q96ID5 467 aa14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 RBM4BQ9BQ04 359 aaKnown RBP14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 HERPUD2Q9BSE4 406 aa14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 MCMBPQ9BTE3 642 aa14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 RBM4Q9BWF3 364 aaKnown RBP14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 RETREG1Q9H6L5 497 aa14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 ELAC1Q9H777 363 aaKnown RBP14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 GSTK1Q9Y2Q3 226 aa14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 OR10H1Q9Y4A9 318 aa14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 KCTD3Q9Y597 815 aa14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 EFCAB10A6NFE3 127 aa14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 FAM25AB3EWG3 89 aa14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 FAM25CB3EWG5 89 aa14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 FAM25GB3EWG6 89 aa14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 LYNP07948 512 aa14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 RFC2P35250 354 aa14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 SLC5A9Q2M3M2 681 aa14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 GALNT18Q6P9A2 607 aa14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 TPRG1Q6ZUI0 275 aa14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 VN1R5Q7Z5H4 357 aa14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 CMTM8Q8IZV2 173 aa14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 WDR60Q8WVS4 1066 aa14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 IFT80Q9P2H3 777 aaPredicted RBP14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 SUCOQ9UBS9 1254 aaKnown RBP14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 ZDHHC2Q9UIJ5 367 aa14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 DAPK2Q9UIK4 370 aa14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 ERGIC3Q9Y282 383 aa14.02□□□□□ -0.17
PCDHGA11-201ENST00000398587 AKAP11Q9UKA4 1901 aa14.01□□□□□ -0.17
PCDHGA11-201ENST00000398587 PCCBP05166 539 aa14.01□□□□□ -0.17
PCDHGA11-201ENST00000398587 RPS9P46781 194 aaKnown RBP14.01□□□□□ -0.17
PCDHGA11-201ENST00000398587 FPGSQ05932 587 aa14.01□□□□□ -0.17
PCDHGA11-201ENST00000398587 LRRC73Q5JTD7 316 aa14.01□□□□□ -0.17
PCDHGA11-201ENST00000398587 GPRIN1Q7Z2K8 1008 aa14.01□□□□□ -0.17
PCDHGA11-201ENST00000398587 OR10A6Q8NH74 314 aa14.01□□□□□ -0.17
PCDHGA11-201ENST00000398587 AKTIPQ9H8T0 292 aa14.01□□□□□ -0.17
PCDHGA11-201ENST00000398587 CIDEBQ9UHD4 219 aa14.01□□□□□ -0.17
PCDHGA11-201ENST00000398587 COLEC10Q9Y6Z7 277 aa14.01□□□□□ -0.17
PCDHGA11-201ENST00000398587 FAM149AA5PLN7 773 aa14.01□□□□□ -0.17
PCDHGA11-201ENST00000398587 NBNO60934 754 aa14.01□□□□□ -0.17
PCDHGA11-201ENST00000398587 CHRNA1P02708 482 aa14.01□□□□□ -0.17
PCDHGA11-201ENST00000398587 FEN1P39748 380 aaKnown RBP14.01□□□□□ -0.17
PCDHGA11-201ENST00000398587 TRAP1Q12931 704 aaKnown RBP14.01□□□□□ -0.17
PCDHGA11-201ENST00000398587 C17orf99Q6UX52 265 aa14.01□□□□□ -0.17
PCDHGA11-201ENST00000398587 DEF8Q6ZN54 512 aa14.01□□□□□ -0.17
PCDHGA11-201ENST00000398587 PIM3Q86V86 326 aa14.01□□□□□ -0.17
PCDHGA11-201ENST00000398587 PEX13Q92968 403 aa14.01□□□□□ -0.17
PCDHGA11-201ENST00000398587 INTS7Q9NVH2 962 aaKnown RBP14.01□□□□□ -0.17
PCDHGA11-201ENST00000398587 LYVE1Q9Y5Y7 322 aa14.01□□□□□ -0.17
PCDHGA11-201ENST00000398587 BHMG1C9JSJ3 638 aaPredicted RBP14.01□□□□□ -0.17
PCDHGA11-201ENST00000398587 BMP7P18075 431 aa14.01□□□□□ -0.17
PCDHGA11-201ENST00000398587 CDK9P50750 372 aaKnown RBP14.01□□□□□ -0.17
PCDHGA11-201ENST00000398587 MAPK12P53778 367 aa14.01□□□□□ -0.17
PCDHGA11-201ENST00000398587 GCNT6Q5T4J0 391 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms