RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 PTPRCAPQ14761 206 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 HLFQ16534 295 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 HYAL4Q2M3T9 481 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 KRBOX4Q5JUW0 171 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 ARMC4Q5T2S8 1044 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 HECTD3Q5T447 861 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 TMEM211Q6ICI0 200 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 CAPRIN2Q6IMN6 1127 aaKnown RBP2.65□□□□□ -1.99
CD47-203ENST00000398258 RHBDF2Q6PJF5 856 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 SATL1Q86VE3 508 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 TMEM219Q86XT9 240 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 CTAGE4Q8IX94 777 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 ZNF595Q8IYB9 648 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 RNF113BQ8IZP6 322 aaKnown RBP2.65□□□□□ -1.99
CD47-203ENST00000398258 AFAP1Q8N556 730 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 PI4KAP1Q8N8J0 262 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 EXD1Q8NHP7 514 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 HMGCLL1Q8TB92 370 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 WDR20Q8TBZ3 569 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 SLC44A1Q8WWI5 657 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 ATL1Q8WXF7 558 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 SMPDL3BQ92485 455 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 TAF15Q92804 592 aaKnown RBP eCLIP2.65□□□□□ -1.99
CD47-203ENST00000398258 VPS33AQ96AX1 596 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 HDAC11Q96DB2 347 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 C3orf30Q96M34 536 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 OR1F2PQ96R84 312 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 OR6C1Q96RD1 312 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 CSF3RQ99062 836 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 NAA11Q9BSU3 229 aaPredicted RBP2.65□□□□□ -1.99
CD47-203ENST00000398258 TM6SF1Q9BZW5 370 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 WNT5BQ9H1J7 359 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 EBF2Q9HAK2 575 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 CHMP1AQ9HD42 196 aaPredicted RBP2.65□□□□□ -1.99
CD47-203ENST00000398258 EQTNQ9NQ60 294 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 MBNL1Q9NR56 388 aaKnown RBP2.65□□□□□ -1.99
CD47-203ENST00000398258 B3GALT5Q9Y2C3 310 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 DLGAP4Q9Y2H0 992 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 SNX9Q9Y5X1 595 aa2.65□□□□□ -1.99
CD47-203ENST00000398258 PDS5AQ29RF7 1337 aaKnown RBP2.65□□□□□ -1.99
CD47-203ENST00000398258 A0A087WV48 116 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 EDDM13A0A1B0GTR0 161 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 MAGEA13PA6NCF6 341 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 OR5K3A6NET4 321 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 C5orf60A6NFR6 353 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 PI4K2BG5E9Z4 385 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 BUD23O43709 281 aaKnown RBP2.64□□□□□ -1.99
CD47-203ENST00000398258 TADA2AO75478 443 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 ZWINTO95229 277 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 ZBTB11O95625 1053 aaPredicted RBP2.64□□□□□ -1.99
CD47-203ENST00000398258 PPP1R3DO95685 299 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 TRUB2O95900 331 aaKnown RBP2.64□□□□□ -1.99
CD47-203ENST00000398258 BCL10O95999 233 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 LDLRP01130 860 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 CGAP01215 116 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 RPN1P04843 607 aaKnown RBP2.64□□□□□ -1.99
CD47-203ENST00000398258 FAM106CPP0CH98 169 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 HLA-DOBP13765 273 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 DAOP14920 347 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 MYOD1P15172 320 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 PFKFB1P16118 471 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 ZNF23P17027 643 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 GJA1P17302 382 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 PTAFRP25105 342 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 MC5RP33032 325 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 TMPOP42166 694 aaKnown RBP2.64□□□□□ -1.99
CD47-203ENST00000398258 PEX5P50542 639 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 HNRNPKP61978 463 aaKnown RBP eCLIP2.64□□□□□ -1.99
CD47-203ENST00000398258 SNRPEP62304 92 aaKnown RBP2.64□□□□□ -1.99
CD47-203ENST00000398258 EEF1A1P68104 462 aaKnown RBP2.64□□□□□ -1.99
CD47-203ENST00000398258 PRKCZQ05513 592 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 PNRC1Q12796 327 aaPredicted RBP2.64□□□□□ -1.99
CD47-203ENST00000398258 TROAPQ12815 778 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 RALGDSQ12967 914 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 KEAP1Q14145 624 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 KRT33BQ14525 404 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 SF3B4Q15427 424 aaKnown RBP eCLIP2.64□□□□□ -1.993e-15■■■□□ 14.7
CD47-203ENST00000398258 IZUMO4Q1ZYL8 232 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 KLHL26Q53HC5 615 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 GRTP1Q5TC63 336 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 EEF1A1P5Q5VTE0 462 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 NADSYN1Q6IA69 706 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 FIGLAQ6QHK4 219 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 ASB18Q6ZVZ8 466 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 CREB3L2Q70SY1 520 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 ERN2Q76MJ5 926 aaKnown RBP2.64□□□□□ -1.99
CD47-203ENST00000398258 GLRX5Q86SX6 157 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 RBM23Q86U06 439 aaKnown RBP2.64□□□□□ -1.99
CD47-203ENST00000398258 IQCHQ86VS3 1027 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 MAP7D3Q8IWC1 876 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 C1orf52Q8N6N3 182 aaKnown RBP2.64□□□□□ -1.99
CD47-203ENST00000398258 OR6J1Q8NGC5 347 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 LNX1Q8TBB1 728 aaPredicted RBP2.64□□□□□ -1.99
CD47-203ENST00000398258 SLC20A1Q8WUM9 679 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 SLC38A5Q8WUX1 472 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 MTBPQ96DY7 904 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 FER1L6-AS2Q96M78 137 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 RAB3IPQ96QF0 476 aaPredicted RBP2.64□□□□□ -1.99
CD47-203ENST00000398258 MEIS3Q99687 375 aa2.64□□□□□ -1.99
CD47-203ENST00000398258 OLFM1Q99784 485 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms