RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 BFARQ9NZS9 450 aa16.33■□□□□ 0.2
APTR-201ENST00000398043 CFAP20Q9Y6A4 193 aaKnown RBP16.33■□□□□ 0.2
APTR-201ENST00000398043 C9orf172C9J069 976 aa16.32■□□□□ 0.2
APTR-201ENST00000398043 AGRPO00253 132 aa16.32■□□□□ 0.2
APTR-201ENST00000398043 OR1I1O60431 355 aa16.32■□□□□ 0.2
APTR-201ENST00000398043 AVILO75366 819 aa16.32■□□□□ 0.2
APTR-201ENST00000398043 GSTM1P09488 218 aa16.32■□□□□ 0.2
APTR-201ENST00000398043 ANKRD34CP0C6C1 535 aa16.32■□□□□ 0.2
APTR-201ENST00000398043 JMJD7P0C870 316 aa16.32■□□□□ 0.2
APTR-201ENST00000398043 MAGEA3P43357 314 aa16.32■□□□□ 0.2
APTR-201ENST00000398043 GFERP55789 205 aa16.32■□□□□ 0.2
APTR-201ENST00000398043 GNG11P61952 73 aa16.32■□□□□ 0.2
APTR-201ENST00000398043 GSTM4Q03013 218 aa16.32■□□□□ 0.2
APTR-201ENST00000398043 TLE3Q04726 772 aa16.32■□□□□ 0.2
APTR-201ENST00000398043 CCDC173Q0VFZ6 552 aa16.32■□□□□ 0.2
APTR-201ENST00000398043 COL28A1Q2UY09 1125 aa16.32■□□□□ 0.2
APTR-201ENST00000398043 LYPLAL1Q5VWZ2 237 aa16.32■□□□□ 0.2
APTR-201ENST00000398043 ARMC3Q5W041 872 aa16.32■□□□□ 0.2
APTR-201ENST00000398043 CERS6Q6ZMG9 384 aa16.32■□□□□ 0.2
APTR-201ENST00000398043 AGBL5Q8NDL9 886 aa16.32■□□□□ 0.2
APTR-201ENST00000398043 MCUQ8NE86 351 aa16.32■□□□□ 0.2
APTR-201ENST00000398043 ZFPM2Q8WW38 1151 aa16.32■□□□□ 0.2
APTR-201ENST00000398043 RSC1A1Q92681 617 aa16.32■□□□□ 0.2
APTR-201ENST00000398043 OCIAD1Q9NX40 245 aa16.32■□□□□ 0.2
APTR-201ENST00000398043 MARCH4Q9P2E8 410 aaPredicted RBP16.32■□□□□ 0.2
APTR-201ENST00000398043 FAM8A1Q9UBU6 413 aa16.32■□□□□ 0.2
APTR-201ENST00000398043 EPHA6Q9UF33 1036 aa16.32■□□□□ 0.2
APTR-201ENST00000398043 SOX13Q9UN79 622 aa16.32■□□□□ 0.2
APTR-201ENST00000398043 SEC16AO15027 2179 aa16.31■□□□□ 0.2
APTR-201ENST00000398043 LOC400499M0QZD8 3231 aa16.31■□□□□ 0.2
APTR-201ENST00000398043 RRP8O43159 456 aaKnown RBP16.31■□□□□ 0.2
APTR-201ENST00000398043 PRAMEF10O60809 474 aa16.31■□□□□ 0.2
APTR-201ENST00000398043 POLBP06746 335 aa16.31■□□□□ 0.2
APTR-201ENST00000398043 TYRP1P17643 537 aa16.31■□□□□ 0.2
APTR-201ENST00000398043 PDHA2P29803 388 aa16.31■□□□□ 0.2
APTR-201ENST00000398043 MAPK9P45984 424 aa16.31■□□□□ 0.2
APTR-201ENST00000398043 CAPZBP47756 277 aa16.31■□□□□ 0.2
APTR-201ENST00000398043 RPA4Q13156 261 aa16.31■□□□□ 0.2
APTR-201ENST00000398043 DUS1LQ6P1R4 473 aaKnown RBP16.31■□□□□ 0.2
APTR-201ENST00000398043 PLXDC1Q8IUK5 500 aa16.31■□□□□ 0.2
APTR-201ENST00000398043 AGGF1Q8N302 714 aaeCLIP16.31■□□□□ 0.2
APTR-201ENST00000398043 MPP5Q8N3R9 675 aa16.31■□□□□ 0.2
APTR-201ENST00000398043 NAT8LQ8N9F0 302 aa16.31■□□□□ 0.2
APTR-201ENST00000398043 OR6P1Q8NGX9 317 aa16.31■□□□□ 0.2
APTR-201ENST00000398043 USP7Q93009 1102 aa16.31■□□□□ 0.2
APTR-201ENST00000398043 PMEPA1Q969W9 287 aa16.31■□□□□ 0.2
APTR-201ENST00000398043 MFSD3Q96ES6 412 aa16.31■□□□□ 0.2
APTR-201ENST00000398043 CRELD1Q96HD1 420 aa16.31■□□□□ 0.2
APTR-201ENST00000398043 C9orf72Q96LT7 481 aa16.31■□□□□ 0.2
APTR-201ENST00000398043 C12orf66Q96MD2 445 aa16.31■□□□□ 0.2
APTR-201ENST00000398043 KIR3DX1Q9H7L2 352 aa16.31■□□□□ 0.2
APTR-201ENST00000398043 IMP3Q9NV31 184 aaKnown RBP16.31■□□□□ 0.2
APTR-201ENST00000398043 FOXJ2Q9P0K8 574 aa16.31■□□□□ 0.2
APTR-201ENST00000398043 PCYOX1Q9UHG3 505 aa16.31■□□□□ 0.2
APTR-201ENST00000398043 PCDHGA3Q9Y5H0 932 aa16.31■□□□□ 0.2
APTR-201ENST00000398043 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.31■□□□□ 0.2
APTR-201ENST00000398043 B4E171 279 aa16.3■□□□□ 0.2
APTR-201ENST00000398043 QSOX1O00391 747 aa16.3■□□□□ 0.2
APTR-201ENST00000398043 SLC35G4P0C7Q5 338 aa16.3■□□□□ 0.2
APTR-201ENST00000398043 MLNP12872 115 aa16.3■□□□□ 0.2
APTR-201ENST00000398043 IVDP26440 423 aa16.3■□□□□ 0.2
APTR-201ENST00000398043 TSPAN7P41732 249 aa16.3■□□□□ 0.2
APTR-201ENST00000398043 PTGIRP43119 386 aa16.3■□□□□ 0.2
APTR-201ENST00000398043 LEPRP48357 1165 aaKnown RBP16.3■□□□□ 0.2
APTR-201ENST00000398043 ARCN1P48444 511 aaKnown RBP16.3■□□□□ 0.2
APTR-201ENST00000398043 CD151P48509 253 aa16.3■□□□□ 0.2
APTR-201ENST00000398043 PRAMEP78395 509 aa16.3■□□□□ 0.2
APTR-201ENST00000398043 CLN3Q13286 438 aa16.3■□□□□ 0.2
APTR-201ENST00000398043 FASTKD1Q53R41 847 aaKnown RBP16.3■□□□□ 0.2
APTR-201ENST00000398043 GRK7Q8WTQ7 553 aa16.3■□□□□ 0.2
APTR-201ENST00000398043 KCNE4Q8WWG9 221 aa16.3■□□□□ 0.2
APTR-201ENST00000398043 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.3■□□□□ 0.2
APTR-201ENST00000398043 NAPGQ99747 312 aaPredicted RBP16.3■□□□□ 0.2
APTR-201ENST00000398043 DPH1Q9BZG8 443 aa16.3■□□□□ 0.2
APTR-201ENST00000398043 DDX47Q9H0S4 455 aaKnown RBP16.3■□□□□ 0.2
APTR-201ENST00000398043 VPS37BQ9H9H4 285 aa16.3■□□□□ 0.2
APTR-201ENST00000398043 SIDT1Q9NXL6 827 aaKnown RBP16.3■□□□□ 0.2
APTR-201ENST00000398043 SEMA5BQ9P283 1151 aa16.3■□□□□ 0.2
APTR-201ENST00000398043 SLC24A2Q9UI40 661 aa16.3■□□□□ 0.2
APTR-201ENST00000398043 GOLGA6L10A0A0M3HER8 536 aa16.29■□□□□ 0.2
APTR-201ENST00000398043 SLC5A10A0PJK1 596 aa16.29■□□□□ 0.2
APTR-201ENST00000398043 A8MU76 341 aa16.29■□□□□ 0.2
APTR-201ENST00000398043 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.29■□□□□ 0.2
APTR-201ENST00000398043 BHMG1C9JSJ3 638 aaPredicted RBP16.29■□□□□ 0.2
APTR-201ENST00000398043 TOX3O15405 576 aaPredicted RBP16.29■□□□□ 0.2
APTR-201ENST00000398043 CD3EAPO15446 510 aaKnown RBP16.29■□□□□ 0.2
APTR-201ENST00000398043 CAPN5O15484 640 aaPredicted RBP16.29■□□□□ 0.2
APTR-201ENST00000398043 AMD1P17707 334 aa16.29■□□□□ 0.2
APTR-201ENST00000398043 ACADLP28330 430 aa16.29■□□□□ 0.2
APTR-201ENST00000398043 CSTF2P33240 577 aaKnown RBP eCLIP16.29■□□□□ 0.2
APTR-201ENST00000398043 ABCG1P45844 678 aa16.29■□□□□ 0.2
APTR-201ENST00000398043 PREPP48147 710 aa16.29■□□□□ 0.2
APTR-201ENST00000398043 MAPK10P53779 464 aa16.29■□□□□ 0.2
APTR-201ENST00000398043 TERF1P54274 439 aa16.29■□□□□ 0.2
APTR-201ENST00000398043 PPP1CAP62136 330 aa16.29■□□□□ 0.2
APTR-201ENST00000398043 MC2RQ01718 297 aa16.29■□□□□ 0.2
APTR-201ENST00000398043 SNAP47Q5SQN1 464 aa16.29■□□□□ 0.2
APTR-201ENST00000398043 RNASEH2BQ5TBB1 312 aaKnown RBP16.29■□□□□ 0.2
APTR-201ENST00000398043 CES3Q6UWW8 571 aa16.29■□□□□ 0.2
APTR-201ENST00000398043 LRRC69Q6ZNQ3 347 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms