RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 CCDC3Q9BQI4 270 aa14.83□□□□□ -0.04
CHL1-202ENST00000397491 GTPBP2Q9BX10 602 aaKnown RBP14.83□□□□□ -0.04
CHL1-202ENST00000397491 BEX2Q9BXY8 128 aa14.83□□□□□ -0.04
CHL1-202ENST00000397491 AKTIPQ9H8T0 292 aa14.83□□□□□ -0.04
CHL1-202ENST00000397491 GULP1Q9UBP9 304 aa14.83□□□□□ -0.04
CHL1-202ENST00000397491 KCNE2Q9Y6J6 123 aa14.83□□□□□ -0.04
CHL1-202ENST00000397491 FAM159BA6NKW6 160 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 PPP1R11O60927 126 aaPredicted RBP14.82□□□□□ -0.04
CHL1-202ENST00000397491 IFNA6P05013 189 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 HSPA7P48741 367 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 ABRQ12979 859 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 CBLBQ13191 982 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 TSTQ16762 297 aaKnown RBP14.82□□□□□ -0.04
CHL1-202ENST00000397491 FBXO43Q4G163 708 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 ANKRD13BQ86YJ7 626 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 SLC7A5P1Q8MH63 180 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 KCNC2Q96PR1 638 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 TVP23BQ9NYZ1 205 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.82□□□□□ -0.04
CHL1-202ENST00000397491 MAFO75444 373 aaPredicted RBP14.82□□□□□ -0.04
CHL1-202ENST00000397491 UBA1P22314 1058 aaKnown RBP14.82□□□□□ -0.04
CHL1-202ENST00000397491 ZNF234Q14588 700 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 PON2Q15165 354 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 GRIK5Q16478 980 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 RBFAQ8N0V3 343 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 OR4K2Q8NGD2 314 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 TFAP2BQ92481 460 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 CRELD1Q96HD1 420 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 MUS81Q96NY9 551 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 BARD1Q99728 777 aaKnown RBP14.82□□□□□ -0.04
CHL1-202ENST00000397491 MMP27Q9H306 513 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 RPF2Q9H7B2 306 aaKnown RBP14.82□□□□□ -0.04
CHL1-202ENST00000397491 EIF2B4Q9UI10 523 aaKnown RBP14.82□□□□□ -0.04
CHL1-202ENST00000397491 CILPO75339 1184 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 F7P08709 466 aaPredicted RBP14.82□□□□□ -0.04
CHL1-202ENST00000397491 CTPS1P17812 591 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 PCDH1Q08174 1060 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 RPA4Q13156 261 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 NPY5RQ15761 445 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 PDE12Q6L8Q7 609 aaKnown RBP14.82□□□□□ -0.04
CHL1-202ENST00000397491 NUSAP1Q9BXS6 441 aaKnown RBP14.82□□□□□ -0.04
CHL1-202ENST00000397491 TM6SF2Q9BZW4 377 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 HPF1Q9NWY4 346 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 STOX2Q9P2F5 926 aaPredicted RBP14.82□□□□□ -0.04
CHL1-202ENST00000397491 KCNH4Q9UQ05 1017 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 MAU2Q9Y6X3 613 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 TCAF2A6NFQ2 919 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 MAGEB17A8MXT2 336 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 CSTF2P33240 577 aaKnown RBP eCLIP14.82□□□□□ -0.04
CHL1-202ENST00000397491 RHBDL3P58872 404 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 PFKPQ01813 784 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 ZNF45Q02386 682 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 FBXO42Q6P3S6 717 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 LINGO2Q7L985 606 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 HJURPQ8NCD3 748 aaPredicted RBP14.82□□□□□ -0.04
CHL1-202ENST00000397491 TIGARQ9NQ88 270 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 EIF2B3Q9NR50 452 aaKnown RBP14.82□□□□□ -0.04
CHL1-202ENST00000397491 DMAC2Q9NW81 257 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 MAT2BQ9NZL9 334 aa14.82□□□□□ -0.04
CHL1-202ENST00000397491 GADD45GO95257 159 aa14.81□□□□□ -0.04
CHL1-202ENST00000397491 GTF2H2Q13888 395 aa14.81□□□□□ -0.04
CHL1-202ENST00000397491 APOBEC3HQ6NTF7 200 aaKnown RBP14.81□□□□□ -0.04
CHL1-202ENST00000397491 GTF2H2CQ6P1K8 395 aa14.81□□□□□ -0.04
CHL1-202ENST00000397491 UBE2R2Q712K3 238 aaPredicted RBP14.81□□□□□ -0.04
CHL1-202ENST00000397491 CRYBG2Q8N1P7 616 aa14.81□□□□□ -0.04
CHL1-202ENST00000397491 DUSP16Q9BY84 665 aa14.81□□□□□ -0.04
CHL1-202ENST00000397491 DIP2BQ9P265 1576 aa14.81□□□□□ -0.04
CHL1-202ENST00000397491 ARPC4-TTLL3A0A0A6YYG9 625 aa14.81□□□□□ -0.04
CHL1-202ENST00000397491 RNASEH2AO75792 299 aaKnown RBP14.81□□□□□ -0.04
CHL1-202ENST00000397491 MT-CYBP00156 380 aaPredicted RBP14.81□□□□□ -0.04
CHL1-202ENST00000397491 RPN2P04844 631 aa14.81□□□□□ -0.04
CHL1-202ENST00000397491 ZNF697Q5TEC3 545 aa14.81□□□□□ -0.04
CHL1-202ENST00000397491 AURKBQ96GD4 344 aaPredicted RBP14.81□□□□□ -0.04
CHL1-202ENST00000397491 C8orf48Q96LL4 319 aa14.81□□□□□ -0.04
CHL1-202ENST00000397491 TUBA1CQ9BQE3 449 aa14.81□□□□□ -0.04
CHL1-202ENST00000397491 ZFYVE1Q9HBF4 777 aa14.81□□□□□ -0.04
CHL1-202ENST00000397491 SACM1LQ9NTJ5 587 aa14.81□□□□□ -0.04
CHL1-202ENST00000397491 RABL2BQ9UNT1 228 aa14.81□□□□□ -0.04
CHL1-202ENST00000397491 RPL36Q9Y3U8 105 aaKnown RBP14.81□□□□□ -0.04
CHL1-202ENST00000397491 NR2E3Q9Y5X4 410 aa14.81□□□□□ -0.04
CHL1-202ENST00000397491 SCAMP3O14828 347 aaKnown RBP14.81□□□□□ -0.04
CHL1-202ENST00000397491 STK16O75716 305 aa14.81□□□□□ -0.04
CHL1-202ENST00000397491 CLDN9O95484 217 aa14.81□□□□□ -0.04
CHL1-202ENST00000397491 IFNGP01579 166 aa14.81□□□□□ -0.04
CHL1-202ENST00000397491 CYP2A6P11509 494 aaPredicted RBP14.81□□□□□ -0.04
CHL1-202ENST00000397491 PTX3P26022 381 aaPredicted RBP14.81□□□□□ -0.04
CHL1-202ENST00000397491 STOMP27105 288 aa14.81□□□□□ -0.04
CHL1-202ENST00000397491 ACSL1P33121 698 aa14.81□□□□□ -0.04
CHL1-202ENST00000397491 RPS3AP61247 264 aaKnown RBP14.81□□□□□ -0.04
CHL1-202ENST00000397491 RBBP4Q09028 425 aa14.81□□□□□ -0.04
CHL1-202ENST00000397491 ANKDD1AQ495B1 522 aa14.81□□□□□ -0.04
CHL1-202ENST00000397491 PABPC1LQ4VXU2 614 aaKnown RBP14.81□□□□□ -0.04
CHL1-202ENST00000397491 IFI44LQ53G44 452 aa14.81□□□□□ -0.04
CHL1-202ENST00000397491 ULK3Q6PHR2 472 aa14.81□□□□□ -0.04
CHL1-202ENST00000397491 SCML4Q8N228 414 aa14.81□□□□□ -0.04
CHL1-202ENST00000397491 BIRC7Q96CA5 298 aa14.81□□□□□ -0.04
CHL1-202ENST00000397491 CDC14AQ9UNH5 594 aa14.81□□□□□ -0.04
CHL1-202ENST00000397491 CXCR2P25025 360 aa14.81□□□□□ -0.04
CHL1-202ENST00000397491 DNAJA1P31689 397 aaKnown RBP14.81□□□□□ -0.04
CHL1-202ENST00000397491 SLC1A2P43004 574 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms