RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 OSBPL11Q9BXB4 747 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 PDFQ9HBH1 243 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 EXD2Q9NVH0 621 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 FADS3Q9Y5Q0 445 aa10.28□□□□□ -0.76
CPSF1P1-201ENST00000397477 DICER1Q9UPY3 1922 aaKnown RBP10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 DFNA5O60443 496 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 HMGA1P17096 107 aaKnown RBP10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 DNAJB1P25685 340 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 SLC26A3P40879 764 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 PPP3CCP48454 512 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 DEFB103AP81534 67 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 TIAL1Q01085 375 aaKnown RBP eCLIP10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 GTDC1Q4AE62 458 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 SPANXN4Q5MJ08 99 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 TMTC4Q5T4D3 741 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 PRMT9Q6P2P2 845 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 KLHDC10Q6PID8 442 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 BLOC1S3Q6QNY0 202 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 UBE2R2Q712K3 238 aaPredicted RBP10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 TMEM102Q8N9M5 508 aaPredicted RBP10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 CYB5D2Q8WUJ1 264 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 SNX19Q92543 992 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 DGCR14Q96DF8 476 aaKnown RBP10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 ZNF385DQ9H6B1 395 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 IL26Q9NPH9 171 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 TMEM181Q9P2C4 612 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 INSL5Q9Y5Q6 135 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 BBIP1A8MTZ0 92 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 TEX28O15482 410 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 RGS14O43566 566 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 VPS4BO75351 444 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 SNUPNO95149 360 aaKnown RBP10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 CXCL14O95715 111 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 LMAN2Q12907 356 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 TCEA2Q15560 299 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 LRRC66Q68CR7 880 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 NCEH1Q6PIU2 408 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 GPR156Q8NFN8 814 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 ELMO1Q92556 727 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 FAM120BQ96EK7 910 aaKnown RBP10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 TRIB3Q96RU7 358 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 ADI1Q9BV57 179 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 ZDHHC4Q9NPG8 344 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 IL17CQ9P0M4 197 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 TNPO3Q9Y5L0 923 aaKnown RBP10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 HNRNPRO43390 633 aaKnown RBP10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 MAN1A2O60476 641 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 PFDN1O60925 122 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 STK16O75716 305 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 GLUD1P00367 558 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 ANXA5P08758 320 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 MYCLP1P12525 358 aaPredicted RBP10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 PRKACGP22612 351 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 MAP4P27816 1152 aaKnown RBP10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 AQP1P29972 269 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 INHBCP55103 352 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 SPIDRQ14159 915 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 SELPLGQ14242 412 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 SF1Q15637 639 aaKnown RBP10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 PLPP4Q5VZY2 271 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 TRAF7Q6Q0C0 670 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 ZNF621Q6ZSS3 439 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 SPATA19Q7Z5L4 167 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 GPR141Q7Z602 305 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 GALNT10Q86SR1 603 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 RBM23Q86U06 439 aaKnown RBP10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 LMNTD1Q8N9Z9 388 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 ZFP28Q8NHY6 868 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 KCNJ9Q92806 393 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 C9orf16Q9BUW7 83 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 PCDH12Q9NPG4 1184 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 ASB3Q9Y575 518 aa10.27□□□□□ -0.77
CPSF1P1-201ENST00000397477 KPNA3O00505 521 aaPredicted RBP10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 HS6ST1O60243 411 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 PGLSO95336 258 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 C8AP07357 584 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 CYP4B1P13584 511 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 BPIP17213 487 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 NFATC2Q13469 925 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 ARHGEF6Q15052 776 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 GPR107Q5VW38 600 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 OR2T12Q8NG77 320 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 SLCO4A1Q96BD0 722 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 BIRC7Q96CA5 298 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 MTERF1Q99551 399 aaKnown RBP10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 MRPS26Q9BYN8 205 aaKnown RBP10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 POLR1BQ9H9Y6 1135 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 SDR39U1Q9NRG7 319 aaPredicted RBP10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 HCFC1R1Q9NWW0 138 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 SPG21Q9NZD8 308 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 ADGRE2Q9UHX3 823 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 MED16Q9Y2X0 877 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 FKTNO75072 461 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 KCNH1O95259 989 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 IGLV3-27P01718 113 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 TFAP2AP05549 437 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 CA5AP35218 305 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 SPAM1P38567 509 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 NNMTP40261 264 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 ACADVLP49748 655 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms