RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 MGAT4DA6NG13 374 aa26.96■■□□□ 1.91
CPNE1-203ENST00000397442 UBXN8O00124 270 aa26.96■■□□□ 1.91
CPNE1-203ENST00000397442 GRID2O43424 1007 aa26.96■■□□□ 1.91
CPNE1-203ENST00000397442 VIMP08670 466 aaKnown RBP26.96■■□□□ 1.91
CPNE1-203ENST00000397442 MPC1LP0DKB6 136 aa26.96■■□□□ 1.91
CPNE1-203ENST00000397442 PREPP48147 710 aa26.96■■□□□ 1.91
CPNE1-203ENST00000397442 HK3P52790 923 aa26.96■■□□□ 1.91
CPNE1-203ENST00000397442 ARHGAP8P85298 464 aa26.96■■□□□ 1.91
CPNE1-203ENST00000397442 PLA2G4EQ3MJ16 856 aa26.96■■□□□ 1.91
CPNE1-203ENST00000397442 LIPMQ5VYY2 423 aa26.96■■□□□ 1.91
CPNE1-203ENST00000397442 NEK10Q6ZWH5 1172 aa26.96■■□□□ 1.91
CPNE1-203ENST00000397442 ABI3BPQ7Z7G0 1075 aa26.96■■□□□ 1.91
CPNE1-203ENST00000397442 ADAMTSL2Q86TH1 951 aa26.96■■□□□ 1.91
CPNE1-203ENST00000397442 OXR1Q8N573 874 aa26.96■■□□□ 1.91
CPNE1-203ENST00000397442 EXT2Q93063 718 aa26.96■■□□□ 1.91
CPNE1-203ENST00000397442 SCARF2Q96GP6 870 aaPredicted RBP26.96■■□□□ 1.91
CPNE1-203ENST00000397442 TM7SF3Q9NS93 570 aa26.96■■□□□ 1.91
CPNE1-203ENST00000397442 SPATA6Q9NWH7 488 aaPredicted RBP26.96■■□□□ 1.91
CPNE1-203ENST00000397442 A0A1W2PPC4 97 aa26.95■■□□□ 1.91
CPNE1-203ENST00000397442 LIN7AO14910 233 aaPredicted RBP26.95■■□□□ 1.91
CPNE1-203ENST00000397442 RRP9O43818 475 aaKnown RBP26.95■■□□□ 1.91
CPNE1-203ENST00000397442 IPO13O94829 963 aaKnown RBP26.95■■□□□ 1.91
CPNE1-203ENST00000397442 SERPINE1P05121 402 aa26.95■■□□□ 1.91
CPNE1-203ENST00000397442 HOXA6P31267 233 aa26.95■■□□□ 1.91
CPNE1-203ENST00000397442 NUDT1P36639 197 aa26.95■■□□□ 1.91
CPNE1-203ENST00000397442 PRKAA2P54646 552 aa26.95■■□□□ 1.91
CPNE1-203ENST00000397442 NFKB2Q00653 900 aa26.95■■□□□ 1.91
CPNE1-203ENST00000397442 NFATC4Q14934 902 aa26.95■■□□□ 1.91
CPNE1-203ENST00000397442 SYTL3Q4VX76 610 aa26.95■■□□□ 1.91
CPNE1-203ENST00000397442 RASGRP3Q8IV61 690 aa26.95■■□□□ 1.91
CPNE1-203ENST00000397442 TMEM159Q96B96 161 aa26.95■■□□□ 1.91
CPNE1-203ENST00000397442 GATA5Q9BWX5 397 aaPredicted RBP26.95■■□□□ 1.91
CPNE1-203ENST00000397442 C20orf27Q9GZN8 174 aa26.95■■□□□ 1.91
CPNE1-203ENST00000397442 PCED1AQ9H1Q7 454 aa26.95■■□□□ 1.91
CPNE1-203ENST00000397442 RABEP2Q9H5N1 569 aa26.95■■□□□ 1.91
CPNE1-203ENST00000397442 RMI1Q9H9A7 625 aa26.95■■□□□ 1.91
CPNE1-203ENST00000397442 COG4Q9H9E3 785 aa26.95■■□□□ 1.91
CPNE1-203ENST00000397442 FGF22Q9HCT0 170 aa26.95■■□□□ 1.91
CPNE1-203ENST00000397442 FGFR1OP2Q9NVK5 253 aa26.95■■□□□ 1.91
CPNE1-203ENST00000397442 DNMT3AQ9Y6K1 912 aaPredicted RBP26.95■■□□□ 1.91
CPNE1-203ENST00000397442 SLCO1B1Q9Y6L6 691 aa26.95■■□□□ 1.91
CPNE1-203ENST00000397442 ANKRD12Q6UB98 2062 aa26.95■■□□□ 1.9
CPNE1-203ENST00000397442 METTL12A8MUP2 240 aa26.95■■□□□ 1.9
CPNE1-203ENST00000397442 NDUFS2O75306 463 aa26.95■■□□□ 1.9
CPNE1-203ENST00000397442 SNNO75324 88 aaPredicted RBP26.95■■□□□ 1.9
CPNE1-203ENST00000397442 TPBGLP0DKB5 382 aa26.95■■□□□ 1.9
CPNE1-203ENST00000397442 DRD4P21917 467 aa26.95■■□□□ 1.9
CPNE1-203ENST00000397442 PDHA2P29803 388 aa26.95■■□□□ 1.9
CPNE1-203ENST00000397442 ARRB2P32121 409 aa26.95■■□□□ 1.9
CPNE1-203ENST00000397442 DNAJB13P59910 316 aa26.95■■□□□ 1.9
CPNE1-203ENST00000397442 TERF2Q15554 542 aa26.95■■□□□ 1.9
CPNE1-203ENST00000397442 PHKG1Q16816 387 aa26.95■■□□□ 1.9
CPNE1-203ENST00000397442 FAM47EQ6ZV65 393 aa26.95■■□□□ 1.9
CPNE1-203ENST00000397442 GPSM1Q86YR5 675 aa26.95■■□□□ 1.9
CPNE1-203ENST00000397442 CFAP206Q8IYR0 622 aa26.95■■□□□ 1.9
CPNE1-203ENST00000397442 SLC22A15Q8IZD6 547 aa26.95■■□□□ 1.9
CPNE1-203ENST00000397442 CADM4Q8NFZ8 388 aa26.95■■□□□ 1.9
CPNE1-203ENST00000397442 HM13Q8TCT9 377 aa26.95■■□□□ 1.9
CPNE1-203ENST00000397442 ASB11Q8WXH4 323 aa26.95■■□□□ 1.9
CPNE1-203ENST00000397442 MOCOSQ96EN8 888 aa26.95■■□□□ 1.9
CPNE1-203ENST00000397442 ZNF395Q9H8N7 513 aaPredicted RBP26.95■■□□□ 1.9
CPNE1-203ENST00000397442 CYP4F12Q9HCS2 524 aa26.95■■□□□ 1.9
CPNE1-203ENST00000397442 MRPL40Q9NQ50 206 aaKnown RBP26.95■■□□□ 1.9
CPNE1-203ENST00000397442 PRMT8Q9NR22 394 aaPredicted RBP26.95■■□□□ 1.9
CPNE1-203ENST00000397442 ZNHIT2Q9UHR6 403 aa26.95■■□□□ 1.9
CPNE1-203ENST00000397442 SYCE1LA8MT33 242 aa26.94■■□□□ 1.9
CPNE1-203ENST00000397442 KMOO15229 486 aa26.94■■□□□ 1.9
CPNE1-203ENST00000397442 KLK8O60259 260 aa26.94■■□□□ 1.9
CPNE1-203ENST00000397442 YPEL5P62699 121 aa26.94■■□□□ 1.9
CPNE1-203ENST00000397442 NFE2L1Q14494 772 aa26.94■■□□□ 1.9
CPNE1-203ENST00000397442 TGFBIQ15582 683 aa26.94■■□□□ 1.9
CPNE1-203ENST00000397442 ATG16L1Q676U5 607 aa26.94■■□□□ 1.9
CPNE1-203ENST00000397442 TSSK4Q6SA08 328 aa26.94■■□□□ 1.9
CPNE1-203ENST00000397442 ATG14Q6ZNE5 492 aa26.94■■□□□ 1.9
CPNE1-203ENST00000397442 FAM83HQ6ZRV2 1179 aaPredicted RBP26.94■■□□□ 1.9
CPNE1-203ENST00000397442 AMZ2Q86W34 360 aa26.94■■□□□ 1.9
CPNE1-203ENST00000397442 DEFB119Q8N690 84 aa26.94■■□□□ 1.9
CPNE1-203ENST00000397442 CCDC126Q96EE4 140 aa26.94■■□□□ 1.9
CPNE1-203ENST00000397442 PHF21BQ96EK2 531 aa26.94■■□□□ 1.9
CPNE1-203ENST00000397442 ACSS2Q9NR19 701 aa26.94■■□□□ 1.9
CPNE1-203ENST00000397442 TMEM221A6NGB7 291 aa26.93■■□□□ 1.9
CPNE1-203ENST00000397442 SUPT3HB4E1H0 165 aa26.93■■□□□ 1.9
CPNE1-203ENST00000397442 M0R296 226 aa26.93■■□□□ 1.9
CPNE1-203ENST00000397442 SUPT3HO75486 399 aa26.93■■□□□ 1.9
CPNE1-203ENST00000397442 MATN4O95460 622 aa26.93■■□□□ 1.9
CPNE1-203ENST00000397442 TDGF1P13385 188 aa26.93■■□□□ 1.9
CPNE1-203ENST00000397442 GABPB1Q06547 395 aaPredicted RBP26.93■■□□□ 1.9
CPNE1-203ENST00000397442 STX3Q13277 289 aa26.93■■□□□ 1.9
CPNE1-203ENST00000397442 PYCR3Q53H96 274 aa26.93■■□□□ 1.9
CPNE1-203ENST00000397442 SLC22A9Q8IVM8 553 aa26.93■■□□□ 1.9
CPNE1-203ENST00000397442 PPP1R14CQ8TAE6 165 aa26.93■■□□□ 1.9
CPNE1-203ENST00000397442 TMEM237Q96Q45 408 aa26.93■■□□□ 1.9
CPNE1-203ENST00000397442 NCKIPSDQ9NZQ3 722 aa26.93■■□□□ 1.9
CPNE1-203ENST00000397442 SUFUQ9UMX1 484 aa26.93■■□□□ 1.9
CPNE1-203ENST00000397442 OARD1Q9Y530 152 aa26.93■■□□□ 1.9
CPNE1-203ENST00000397442 GFYI3L273 518 aa26.92■■□□□ 1.9
CPNE1-203ENST00000397442 TOR1BO14657 336 aa26.92■■□□□ 1.9
CPNE1-203ENST00000397442 ITM2AO43736 263 aa26.92■■□□□ 1.9
CPNE1-203ENST00000397442 EDF1O60869 148 aaKnown RBP26.92■■□□□ 1.9
CPNE1-203ENST00000397442 SMIM24O75264 130 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms