RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 RPL6Q02878 288 aaKnown RBP16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 GBX1Q14549 363 aa16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 TSNAXIP1Q2TAA8 658 aa16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 ZNF658BQ4V348 819 aaPredicted RBP16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 DOK6Q6PKX4 331 aa16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 KYAT3Q6YP21 454 aaKnown RBP16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 OTOAQ7RTW8 1153 aa16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 ABI3BPQ7Z7G0 1075 aa16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 CPNE9Q8IYJ1 553 aa16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 SPATA6LQ8N4H0 392 aa16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 NKAPQ8N5F7 415 aaKnown RBP16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 ZBTB2Q8N680 514 aa16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 LINC00615Q96LM1 132 aaPredicted RBP16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 FAM111AQ96PZ2 611 aa16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 CCM2Q9BSQ5 444 aa16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 NKIRAS1Q9NYS0 192 aa16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 RUVBL2Q9Y230 463 aaKnown RBP16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 SLC17A4Q9Y2C5 497 aa16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 ZFC3H1O60293 1989 aaKnown RBP16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 TP53BP1Q12888 1972 aaPredicted RBP16.64■□□□□ 0.25
TSPAN4-205ENST00000397406 CACNB4O00305 520 aaPredicted RBP16.63■□□□□ 0.25
TSPAN4-205ENST00000397406 TOR1BO14657 336 aa16.63■□□□□ 0.25
TSPAN4-205ENST00000397406 MAP3K13O43283 966 aa16.63■□□□□ 0.25
TSPAN4-205ENST00000397406 PLIN3O60664 434 aa16.63■□□□□ 0.25
TSPAN4-205ENST00000397406 PROCP04070 461 aa16.63■□□□□ 0.25
TSPAN4-205ENST00000397406 CEACAM5P06731 702 aa16.63■□□□□ 0.25
TSPAN4-205ENST00000397406 CD1DP15813 335 aa16.63■□□□□ 0.25
TSPAN4-205ENST00000397406 IL2P60568 153 aa16.63■□□□□ 0.25
TSPAN4-205ENST00000397406 YPEL5P62699 121 aa16.63■□□□□ 0.25
TSPAN4-205ENST00000397406 NFATC4Q14934 902 aa16.63■□□□□ 0.25
TSPAN4-205ENST00000397406 FAM83EQ2M2I3 478 aa16.63■□□□□ 0.25
TSPAN4-205ENST00000397406 ACSBG2Q5FVE4 666 aa16.63■□□□□ 0.25
TSPAN4-205ENST00000397406 AGAP9Q5VTM2 703 aa16.63■□□□□ 0.25
TSPAN4-205ENST00000397406 LRRC8EQ6NSJ5 796 aa16.63■□□□□ 0.25
TSPAN4-205ENST00000397406 NAPRTQ6XQN6 538 aa16.63■□□□□ 0.25
TSPAN4-205ENST00000397406 C11orf96Q7Z7L8 435 aa16.63■□□□□ 0.25
TSPAN4-205ENST00000397406 TRAPPC5Q8IUR0 188 aa16.63■□□□□ 0.25
TSPAN4-205ENST00000397406 EEF1AKMT1Q8WVE0 214 aa16.63■□□□□ 0.25
TSPAN4-205ENST00000397406 PDLIM5Q96HC4 596 aaKnown RBP16.63■□□□□ 0.25
TSPAN4-205ENST00000397406 TSNARE1Q96NA8 513 aa16.63■□□□□ 0.25
TSPAN4-205ENST00000397406 DERL2Q9GZP9 239 aa16.63■□□□□ 0.25
TSPAN4-205ENST00000397406 GULP1Q9UBP9 304 aa16.63■□□□□ 0.25
TSPAN4-205ENST00000397406 SLCO1B1Q9Y6L6 691 aa16.63■□□□□ 0.25
TSPAN4-205ENST00000397406 A6NNZ2 444 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 GIPC1O14908 333 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 KHNYNO15037 678 aaKnown RBP16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 KPNA5O15131 536 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 FUCA1P04066 466 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 DHRS4L1P0CG22 281 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 CD27P26842 260 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 GLRBP48167 497 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 TTLL9Q3SXZ7 439 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 CCDC153Q494R4 210 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 TRIM61Q5EBN2 209 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 TECRLQ5HYJ1 363 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 PLEKHS1Q5SXH7 462 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 TPRG1LQ5T0D9 272 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 LYSMD4Q5XG99 296 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 LVRNQ6Q4G3 990 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 CRTC3Q6UUV7 619 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 XKR5Q6UX68 686 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 SYT12Q8IV01 421 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 FSTL5Q8N475 847 aaPredicted RBP16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 TMEM151AQ8N4L1 468 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 MGARPQ8TDB4 240 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 SNX19Q92543 992 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 ELMO1Q92556 727 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 LINGO1Q96FE5 620 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 SCARF2Q96GP6 870 aaPredicted RBP16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 UNKQ9C0B0 810 aaKnown RBP16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 NMRAL1Q9HBL8 299 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 MLXIPLQ9NP71 852 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 CDYLQ9Y232 598 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 EIF3FO00303 357 aaPredicted RBP16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 GRID2O43424 1007 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 ZBTB14O43829 449 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 GPC4O75487 556 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 GSTM1P09488 218 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 SBK3P0C264 359 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 CBSLP0DN79 551 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 DGKAP23743 735 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 PBLDP30039 288 aaPredicted RBP16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 CBSP35520 551 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 KPNA2P52292 529 aaKnown RBP16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 GSTM4Q03013 218 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 BOP1Q14137 746 aaKnown RBP16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 ACAP2Q15057 778 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 ISCA2Q86U28 154 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 LRRTM4Q86VH4 590 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 OXR1Q8N573 874 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 ARMC2Q8NEN0 867 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 OR13H1Q8NG92 308 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 PTERQ96BW5 349 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 HSPA12BQ96MM6 686 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 WDR92Q96MX6 357 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 RMI1Q9H9A7 625 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 FGF22Q9HCT0 170 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 GPR27Q9NS67 375 aa16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 INTS9Q9NV88 658 aaKnown RBP16.62■□□□□ 0.25
TSPAN4-205ENST00000397406 IKZF3Q9UKT9 509 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms