RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 NFKBIAP25963 317 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 HOXD9P28356 352 aaPredicted RBP13.72□□□□□ -0.21
NUP98-204ENST00000397004 OXCT1P55809 520 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 PHC1P78364 1004 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 EMX1Q04741 257 aaPredicted RBP13.72□□□□□ -0.21
NUP98-204ENST00000397004 RGS21Q2M5E4 152 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 INAVAQ3KP66 663 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 FAR1Q8WVX9 515 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 BTN2A3PQ96KV6 586 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 SERPINB11Q96P15 392 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 BPIFA1Q9NP55 256 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 NLE1Q9NVX2 485 aaPredicted RBP13.72□□□□□ -0.21
NUP98-204ENST00000397004 ENPP5Q9UJA9 477 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 U3KQV3 271 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 TMEM247A6NEH6 219 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 CRCPO75575 148 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 PRKG2Q13237 762 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 GBX1Q14549 363 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 GPRIN3Q6ZVF9 776 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 PLEKHH3Q7Z736 793 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 DSG4Q86SJ6 1040 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 MFSD4AQ8N468 514 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 GTF2H4Q92759 462 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 HDAC2Q92769 488 aaKnown RBP13.72□□□□□ -0.21
NUP98-204ENST00000397004 EID2BQ96D98 161 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 RAD21L1Q9H4I0 556 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 PDE10AQ9Y233 779 aa13.72□□□□□ -0.21
NUP98-204ENST00000397004 FNDC3AQ9Y2H6 1198 aaKnown RBP13.72□□□□□ -0.21
NUP98-204ENST00000397004 POLR3HQ9Y535 204 aaPredicted RBP13.72□□□□□ -0.21
NUP98-204ENST00000397004 CCL15-CCL14A0A0B4J2E2 113 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 STX16O14662 325 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 PRAMEF11O60813 436 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 PRKD3O94806 890 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 OGNP20774 298 aaKnown RBP13.71□□□□□ -0.21
NUP98-204ENST00000397004 EPHA2P29317 976 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 IL10RBQ08334 325 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 CCL15Q16663 113 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 DNAJC14Q6Y2X3 702 aaPredicted RBP13.71□□□□□ -0.21
NUP98-204ENST00000397004 KRTCAP2Q8N6L1 136 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 TAMM41Q96BW9 452 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 AURKBQ96GD4 344 aaPredicted RBP13.71□□□□□ -0.21
NUP98-204ENST00000397004 HEPHQ9BQS7 1158 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 TBCDQ9BTW9 1192 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 SCUBE2Q9NQ36 999 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 TAS2R13Q9NYV9 303 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 SLC45A1Q9Y2W3 748 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 DRGXA6NNA5 263 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 SLC1A7O00341 560 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 VPS4BO75351 444 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 KATNA1O75449 491 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 ANXA6P08133 673 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 CD52P31358 61 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 PBX3P40426 434 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 MAP2K4P45985 399 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 RAD23AP54725 363 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 LSM3P62310 102 aaKnown RBP13.71□□□□□ -0.21
NUP98-204ENST00000397004 TUBA3CQ13748 450 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 GRAMD4Q6IC98 578 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 MRPL10Q7Z7H8 261 aaKnown RBP13.71□□□□□ -0.21
NUP98-204ENST00000397004 ZNF280BQ86YH2 543 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 SPATA2LQ8IUW3 424 aaPredicted RBP13.71□□□□□ -0.21
NUP98-204ENST00000397004 SLC10A4Q96EP9 437 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 NUSAP1Q9BXS6 441 aaKnown RBP13.71□□□□□ -0.21
NUP98-204ENST00000397004 MROQ9BYG7 248 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 CRISPLD1Q9H336 500 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 ATP13A3Q9H7F0 1226 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 PALMDQ9NP74 551 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 ELOVL2Q9NXB9 296 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 MAGEL2Q9UJ55 1249 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 B3GNT3Q9Y2A9 372 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 GIT1Q9Y2X7 761 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 ARVCFO00192 962 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 ARNTLO00327 626 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 DNASE1L3Q13609 305 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 CATSPEREQ5SY80 951 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 C8orf59Q8N0T1 100 aaPredicted RBP13.71□□□□□ -0.21
NUP98-204ENST00000397004 TERB1Q8NA31 727 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 OR7D4Q8NG98 312 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 OR4F6Q8NGB9 312 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 LINGO1Q96FE5 620 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 ZNF347Q96SE7 839 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 TRIM17Q9Y577 477 aa13.71□□□□□ -0.21
NUP98-204ENST00000397004 GPR182O15218 404 aa13.71□□□□□ -0.22
NUP98-204ENST00000397004 RAMP2O60895 175 aa13.71□□□□□ -0.22
NUP98-204ENST00000397004 CST1P01037 141 aa13.71□□□□□ -0.22
NUP98-204ENST00000397004 FGF1P05230 155 aa13.71□□□□□ -0.22
NUP98-204ENST00000397004 MASP1P48740 699 aa13.71□□□□□ -0.22
NUP98-204ENST00000397004 RAPSNQ13702 412 aa13.71□□□□□ -0.22
NUP98-204ENST00000397004 AASDHQ4L235 1098 aaPredicted RBP13.71□□□□□ -0.22
NUP98-204ENST00000397004 RBM48Q5RL73 367 aaKnown RBP13.71□□□□□ -0.22
NUP98-204ENST00000397004 VARS2Q5ST30 1063 aaKnown RBP13.71□□□□□ -0.22
NUP98-204ENST00000397004 C1QTNF12Q5T7M4 302 aa13.71□□□□□ -0.22
NUP98-204ENST00000397004 IL27RAQ6UWB1 636 aa13.71□□□□□ -0.22
NUP98-204ENST00000397004 CYP4Z1Q86W10 505 aa13.71□□□□□ -0.22
NUP98-204ENST00000397004 ZDHHC13Q8IUH4 622 aa13.71□□□□□ -0.22
NUP98-204ENST00000397004 UBE2FQ969M7 185 aa13.71□□□□□ -0.22
NUP98-204ENST00000397004 FEM1AQ9BSK4 669 aa13.71□□□□□ -0.22
NUP98-204ENST00000397004 HERC2P3Q9BVR0 1158 aa13.71□□□□□ -0.22
NUP98-204ENST00000397004 POLR1EQ9GZS1 481 aaKnown RBP13.71□□□□□ -0.22
NUP98-204ENST00000397004 POLE4Q9NR33 117 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms