RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 DGLUCYQ7Z3D6 616 aa4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 CCDC91Q7Z6B0 441 aa4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 TECPR1Q7Z6L1 1165 aa4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 GLCCI1Q86VQ1 547 aa4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 PGBD5Q8N414 524 aa4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 C1orf52Q8N6N3 182 aaKnown RBP4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 GRAPLQ8TC17 118 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 OTUB1Q96FW1 271 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 QRFPRQ96P65 431 aa4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 CPNE1Q99829 537 aa4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 DCLK3Q9C098 648 aa4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 CWC25Q9NXE8 425 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 NPAP1Q9NZP6 1156 aa4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 NFS1Q9Y697 457 aa4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 PTPRCP08575 1304 aa4.85□□□□□ -1.63
HMGB1P10-201ENST00000395823 A0A0U1RQJ8 604 aa4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 LINC01553A4QN01 128 aa4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 STX6O43752 255 aa4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 SRCP12931 536 aa4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 TCEA1P23193 301 aaKnown RBP4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 PTENP60484 403 aa4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 POLR2LP62875 67 aaKnown RBP4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 ETFDHQ16134 617 aa4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 LBHQ53QV2 105 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 GRTP1Q5TC63 336 aa4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 RAD9BQ6WBX8 426 aa4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 TMPRSS11FQ6ZWK6 438 aa4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 TLK2Q86UE8 772 aa4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 MAP7D3Q8IWC1 876 aa4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 C1orf87Q8N0U7 546 aa4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 ANKRD13CQ8N6S4 541 aa4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 ATAD1Q8NBU5 361 aa4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 ATL1Q8WXF7 558 aa4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 SMPDL3BQ92485 455 aa4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 SNX21Q969T3 373 aa4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 ST6GALNAC6Q969X2 333 aa4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 SLAMF9Q96A28 289 aa4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 ZG16BQ96DA0 208 aa4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 SORCS2Q96PQ0 1159 aa4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 FEVQ99581 238 aa4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 EGFL8Q99944 293 aa4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 FNDC11Q9BVV2 318 aa4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 ABT1Q9ULW3 272 aaKnown RBP4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 LIPT1Q9Y234 373 aa4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 SNX9Q9Y5X1 595 aa4.84□□□□□ -1.63
HMGB1P10-201ENST00000395823 OR6C75A6NL08 312 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 CLDN4O14493 209 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 MEIS2O14770 477 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 MID1O15344 667 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 TSPAN1O60635 241 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 GAGE7O76087 117 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 CLDN14O95500 239 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 ACSL3O95573 720 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 GAGE12FP0CL80 117 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 GAGE12GP0CL81 117 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 GAGE12IP0CL82 117 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 PTPN3P26045 913 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 HNF4AP41235 474 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 UBASH3AP57075 661 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 GAGE1Q13065 139 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 GAGE4Q13068 117 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 GCNT6Q5T4J0 391 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 PXDC1Q5TGL8 231 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 PRR27Q6MZM9 219 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 C8orf82Q6P1X6 216 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 ZNF517Q6ZMY9 492 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 TMEM182Q6ZP80 229 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 FAM43BQ6ZT52 329 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 MSANTD1Q6ZTZ1 278 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 MRPL10Q7Z7H8 261 aaKnown RBP4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 TMPRSS11BQ86T26 416 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 TMCO5AQ8N6Q1 288 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 OR14A16Q8NHC5 309 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 DNAAF4Q8WXU2 420 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 ABTB1Q969K4 478 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 PIGTQ969N2 578 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 SPATA33Q96N06 139 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 RBM38Q9H0Z9 239 aaKnown RBP4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 MMADHCQ9H3L0 296 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 DBNDD1Q9H9R9 158 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 Q9N2K0 584 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 C11orf21Q9P2W6 132 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 POLLQ9UGP5 575 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 PADI2Q9Y2J8 665 aa4.83□□□□□ -1.64
HMGB1P10-201ENST00000395823 PDS5AQ29RF7 1337 aaKnown RBP4.82□□□□□ -1.64
HMGB1P10-201ENST00000395823 IGLV5-52A0A0A0MRZ9 124 aa4.82□□□□□ -1.64
HMGB1P10-201ENST00000395823 FAM90A10PA6NDY2 464 aa4.82□□□□□ -1.64
HMGB1P10-201ENST00000395823 OR5K3A6NET4 321 aa4.82□□□□□ -1.64
HMGB1P10-201ENST00000395823 C5orf60A6NFR6 353 aa4.82□□□□□ -1.64
HMGB1P10-201ENST00000395823 C5orf52A6NGY3 159 aa4.82□□□□□ -1.64
HMGB1P10-201ENST00000395823 AP5Z1O43299 807 aa4.82□□□□□ -1.64
HMGB1P10-201ENST00000395823 SERPINI2O75830 405 aa4.82□□□□□ -1.64
HMGB1P10-201ENST00000395823 KDM4BO94953 1096 aa4.82□□□□□ -1.64
HMGB1P10-201ENST00000395823 BAG2O95816 211 aa4.82□□□□□ -1.64
HMGB1P10-201ENST00000395823 TOMM40O96008 361 aa4.82□□□□□ -1.64
HMGB1P10-201ENST00000395823 MYOD1P15172 320 aa4.82□□□□□ -1.64
HMGB1P10-201ENST00000395823 GNAZP19086 355 aa4.82□□□□□ -1.64
HMGB1P10-201ENST00000395823 HOXD3P31249 432 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P10-201ENST00000395823 TIA1P31483 386 aaKnown RBP eCLIP4.82□□□□□ -1.64
HMGB1P10-201ENST00000395823 ARRB2P32121 409 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms