RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.44□□□□□ -0.26
CXCL12-205ENST00000395794 INSM2Q96T92 566 aaPredicted RBP13.44□□□□□ -0.26
CXCL12-205ENST00000395794 TTC1Q99614 292 aa13.44□□□□□ -0.26
CXCL12-205ENST00000395794 GPN2Q9H9Y4 310 aaPredicted RBP13.44□□□□□ -0.26
CXCL12-205ENST00000395794 LZTFL1Q9NQ48 299 aa13.44□□□□□ -0.26
CXCL12-205ENST00000395794 PILRAQ9UKJ1 303 aa13.44□□□□□ -0.26
CXCL12-205ENST00000395794 CFAP20Q9Y6A4 193 aaKnown RBP13.44□□□□□ -0.26
CXCL12-205ENST00000395794 ZFC3H1O60293 1989 aaKnown RBP13.43□□□□□ -0.26
CXCL12-205ENST00000395794 SCN8AQ9UQD0 1980 aa13.43□□□□□ -0.26
CXCL12-205ENST00000395794 F8W8V4 182 aa13.43□□□□□ -0.26
CXCL12-205ENST00000395794 IFRD1O00458 451 aaPredicted RBP13.43□□□□□ -0.26
CXCL12-205ENST00000395794 GSTM1P09488 218 aa13.43□□□□□ -0.26
CXCL12-205ENST00000395794 LIFP15018 202 aa13.43□□□□□ -0.26
CXCL12-205ENST00000395794 PRLHRP49683 370 aa13.43□□□□□ -0.26
CXCL12-205ENST00000395794 GSTM4Q03013 218 aa13.43□□□□□ -0.26
CXCL12-205ENST00000395794 LY6DQ14210 128 aa13.43□□□□□ -0.26
CXCL12-205ENST00000395794 OASLQ15646 514 aaKnown RBP13.43□□□□□ -0.26
CXCL12-205ENST00000395794 DNTTIP2Q5QJE6 756 aaKnown RBP13.43□□□□□ -0.26
CXCL12-205ENST00000395794 PCSK4Q6UW60 755 aa13.43□□□□□ -0.26
CXCL12-205ENST00000395794 ZNF605Q86T29 641 aa13.43□□□□□ -0.26
CXCL12-205ENST00000395794 OOSP2Q86WS3 158 aa13.43□□□□□ -0.26
CXCL12-205ENST00000395794 ZNF843Q8N446 348 aa13.43□□□□□ -0.26
CXCL12-205ENST00000395794 ESX1Q8N693 406 aa13.43□□□□□ -0.26
CXCL12-205ENST00000395794 OR52K1Q8NGK4 314 aa13.43□□□□□ -0.26
CXCL12-205ENST00000395794 NAT14Q8WUY8 206 aa13.43□□□□□ -0.26
CXCL12-205ENST00000395794 MAIP1Q8WWC4 291 aa13.43□□□□□ -0.26
CXCL12-205ENST00000395794 MED8Q96G25 268 aa13.43□□□□□ -0.26
CXCL12-205ENST00000395794 CDKN2AIPNLQ96HQ2 116 aa13.43□□□□□ -0.26
CXCL12-205ENST00000395794 OR6C1Q96RD1 312 aa13.43□□□□□ -0.26
CXCL12-205ENST00000395794 CD180Q99467 661 aa13.43□□□□□ -0.26
CXCL12-205ENST00000395794 ULBP3Q9BZM4 244 aa13.43□□□□□ -0.26
CXCL12-205ENST00000395794 ETNK1Q9HBU6 452 aa13.43□□□□□ -0.26
CXCL12-205ENST00000395794 APMAPQ9HDC9 416 aa13.43□□□□□ -0.26
CXCL12-205ENST00000395794 PDE7BQ9NP56 450 aa13.43□□□□□ -0.26
CXCL12-205ENST00000395794 RAB6BQ9NRW1 208 aa13.43□□□□□ -0.26
CXCL12-205ENST00000395794 PIH1D1Q9NWS0 290 aaKnown RBP13.43□□□□□ -0.26
CXCL12-205ENST00000395794 HRASLS2Q9NWW9 162 aa13.43□□□□□ -0.26
CXCL12-205ENST00000395794 SIDT1Q9NXL6 827 aaKnown RBP13.43□□□□□ -0.26
CXCL12-205ENST00000395794 PAK5Q9P286 719 aa13.43□□□□□ -0.26
CXCL12-205ENST00000395794 UBA6A0AVT1 1052 aaPredicted RBP13.42□□□□□ -0.26
CXCL12-205ENST00000395794 HEATR9A2RTY3 570 aa13.42□□□□□ -0.26
CXCL12-205ENST00000395794 OR5K3A6NET4 321 aa13.42□□□□□ -0.26
CXCL12-205ENST00000395794 MROH6A6NGR9 719 aa13.42□□□□□ -0.26
CXCL12-205ENST00000395794 ZNF891A8MT65 544 aaPredicted RBP13.42□□□□□ -0.26
CXCL12-205ENST00000395794 QSOX1O00391 747 aa13.42□□□□□ -0.26
CXCL12-205ENST00000395794 KIF1CO43896 1103 aaKnown RBP13.42□□□□□ -0.26
CXCL12-205ENST00000395794 AP2A2O94973 939 aa13.42□□□□□ -0.26
CXCL12-205ENST00000395794 SFTPCP11686 197 aa13.42□□□□□ -0.26
CXCL12-205ENST00000395794 NELFEP18615 380 aaKnown RBP13.42□□□□□ -0.26
CXCL12-205ENST00000395794 MSNP26038 577 aaKnown RBP13.42□□□□□ -0.26
CXCL12-205ENST00000395794 NSG1P42857 185 aa13.42□□□□□ -0.26
CXCL12-205ENST00000395794 ABHD18Q0P651 414 aa13.42□□□□□ -0.26
CXCL12-205ENST00000395794 PRKAA1Q13131 559 aa13.42□□□□□ -0.26
CXCL12-205ENST00000395794 LYPLAL1Q5VWZ2 237 aa13.42□□□□□ -0.26
CXCL12-205ENST00000395794 DUS1LQ6P1R4 473 aaKnown RBP13.42□□□□□ -0.26
CXCL12-205ENST00000395794 ZNF662Q6ZS27 426 aa13.42□□□□□ -0.26
CXCL12-205ENST00000395794 NLRP9Q7RTR0 991 aa13.42□□□□□ -0.26
CXCL12-205ENST00000395794 GSTA5Q7RTV2 222 aa13.42□□□□□ -0.26
CXCL12-205ENST00000395794 SIDT2Q8NBJ9 832 aaKnown RBP13.42□□□□□ -0.26
CXCL12-205ENST00000395794 TRIM58Q8NG06 486 aa13.42□□□□□ -0.26
CXCL12-205ENST00000395794 KLHL6Q8WZ60 621 aa13.42□□□□□ -0.26
CXCL12-205ENST00000395794 EXTL1Q92935 676 aa13.42□□□□□ -0.26
CXCL12-205ENST00000395794 ELMO2Q96JJ3 720 aa13.42□□□□□ -0.26
CXCL12-205ENST00000395794 FERD3LQ96RJ6 166 aa13.42□□□□□ -0.26
CXCL12-205ENST00000395794 KIR3DX1Q9H7L2 352 aa13.42□□□□□ -0.26
CXCL12-205ENST00000395794 SMARCAL1Q9NZC9 954 aa13.42□□□□□ -0.26
CXCL12-205ENST00000395794 SLC24A2Q9UI40 661 aa13.42□□□□□ -0.26
CXCL12-205ENST00000395794 TMEM184BQ9Y519 407 aaPredicted RBP13.42□□□□□ -0.26
CXCL12-205ENST00000395794 IGLV3-16A0A075B6K0 115 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 TRBV5-4A0A0C4DH59 114 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 CCDC78A2IDD5 438 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 OR6C74A6NCV1 312 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 MAP3K7O43318 606 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 SGTAO43765 313 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 C1QL1O75973 258 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 SUN1O94901 812 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 APRTP07741 180 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 CCNYL3P0C7X3 344 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 ADRA1DP25100 572 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 PPARGP37231 505 aaPredicted RBP13.41□□□□□ -0.26
CXCL12-205ENST00000395794 CDKN1CP49918 316 aaPredicted RBP13.41□□□□□ -0.26
CXCL12-205ENST00000395794 SH3BP2P78314 561 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 CYP4F2P78329 520 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 MC1RQ01726 317 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 ACY1Q03154 408 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 RPA4Q13156 261 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 MAP7Q14244 749 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 CCNG2Q16589 344 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 CCDC38Q502W7 563 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 CAPRIN2Q6IMN6 1127 aaKnown RBP13.41□□□□□ -0.26
CXCL12-205ENST00000395794 C6orf15Q6UXA7 325 aaPredicted RBP13.41□□□□□ -0.26
CXCL12-205ENST00000395794 C4orf22Q6V702 233 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 BPHLQ86WA6 291 aaPredicted RBP13.41□□□□□ -0.26
CXCL12-205ENST00000395794 PPP1R3BQ86XI6 285 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 KMT5CQ86Y97 462 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 LRRC8AQ8IWT6 810 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 CLDN19Q8N6F1 224 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 ACVR1CQ8NER5 493 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 STAMBPL1Q96FJ0 436 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 RMDN2Q96LZ7 410 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms