RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 BLOC1S5Q8TDH9 187 aa20.59■□□□□ 0.89
TRAF4-203ENST00000394925 RNF25Q96BH1 459 aaPredicted RBP20.59■□□□□ 0.89
TRAF4-203ENST00000394925 LRFN5Q96NI6 719 aa20.59■□□□□ 0.89
TRAF4-203ENST00000394925 NUDT9Q9BW91 350 aa20.59■□□□□ 0.89
TRAF4-203ENST00000394925 TLR10Q9BXR5 811 aa20.59■□□□□ 0.89
TRAF4-203ENST00000394925 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.59■□□□□ 0.89
TRAF4-203ENST00000394925 FAM8A1Q9UBU6 413 aa20.59■□□□□ 0.89
TRAF4-203ENST00000394925 SLC24A2Q9UI40 661 aa20.59■□□□□ 0.89
TRAF4-203ENST00000394925 G3BP2Q9UN86 482 aaKnown RBP20.59■□□□□ 0.89
TRAF4-203ENST00000394925 DOPEY1Q5JWR5 2465 aa20.59■□□□□ 0.89
TRAF4-203ENST00000394925 F5H423 210 aaPredicted RBP20.58■□□□□ 0.89
TRAF4-203ENST00000394925 KRT1P04264 644 aa20.58■□□□□ 0.89
TRAF4-203ENST00000394925 GYPCP04921 128 aa20.58■□□□□ 0.89
TRAF4-203ENST00000394925 RAB40ALP0C0E4 278 aa20.58■□□□□ 0.89
TRAF4-203ENST00000394925 AKT1P31749 480 aa20.58■□□□□ 0.89
TRAF4-203ENST00000394925 CD68P34810 354 aaPredicted RBP20.58■□□□□ 0.89
TRAF4-203ENST00000394925 TNNT3P45378 269 aaPredicted RBP20.58■□□□□ 0.89
TRAF4-203ENST00000394925 UBASH3AP57075 661 aa20.58■□□□□ 0.89
TRAF4-203ENST00000394925 ABRQ12979 859 aa20.58■□□□□ 0.89
TRAF4-203ENST00000394925 KDELC1Q6UW63 502 aa20.58■□□□□ 0.89
TRAF4-203ENST00000394925 GLT6D1Q7Z4J2 308 aa20.58■□□□□ 0.89
TRAF4-203ENST00000394925 VSIG1Q86XK7 387 aa20.58■□□□□ 0.89
TRAF4-203ENST00000394925 DSELQ8IZU8 1212 aa20.58■□□□□ 0.89
TRAF4-203ENST00000394925 SPDYE1Q8NFV5 336 aaPredicted RBP20.58■□□□□ 0.89
TRAF4-203ENST00000394925 NAT14Q8WUY8 206 aa20.58■□□□□ 0.89
TRAF4-203ENST00000394925 CPT1BQ92523 772 aa20.58■□□□□ 0.89
TRAF4-203ENST00000394925 CLIP3Q96DZ5 547 aa20.58■□□□□ 0.89
TRAF4-203ENST00000394925 SLC29A3Q9BZD2 475 aa20.58■□□□□ 0.89
TRAF4-203ENST00000394925 LATS2Q9NRM7 1088 aa20.58■□□□□ 0.89
TRAF4-203ENST00000394925 TCFL5Q9UL49 500 aa20.58■□□□□ 0.89
TRAF4-203ENST00000394925 BTRCQ9Y297 605 aa20.58■□□□□ 0.89
TRAF4-203ENST00000394925 SSU72P8A0A1W2PR75 194 aa20.57■□□□□ 0.88
TRAF4-203ENST00000394925 GAPDHSO14556 408 aaPredicted RBP20.57■□□□□ 0.88
TRAF4-203ENST00000394925 LCA5LO95447 670 aa20.57■□□□□ 0.88
TRAF4-203ENST00000394925 DDAH2O95865 285 aa20.57■□□□□ 0.88
TRAF4-203ENST00000394925 POLR2CP19387 275 aaPredicted RBP20.57■□□□□ 0.88
TRAF4-203ENST00000394925 NFKB1P19838 968 aa20.57■□□□□ 0.88
TRAF4-203ENST00000394925 MSH3P20585 1137 aa20.57■□□□□ 0.88
TRAF4-203ENST00000394925 ITGA1P56199 1179 aa20.57■□□□□ 0.88
TRAF4-203ENST00000394925 ITGA9Q13797 1035 aa20.57■□□□□ 0.88
TRAF4-203ENST00000394925 LONRF2Q1L5Z9 754 aa20.57■□□□□ 0.88
TRAF4-203ENST00000394925 ODF2Q5BJF6 829 aa20.57■□□□□ 0.88
TRAF4-203ENST00000394925 SLC6A19Q695T7 634 aa20.57■□□□□ 0.88
TRAF4-203ENST00000394925 RHOT1Q8IXI2 618 aa20.57■□□□□ 0.88
TRAF4-203ENST00000394925 CARFQ8N187 725 aa20.57■□□□□ 0.88
TRAF4-203ENST00000394925 RBMXL3Q8N7X1 1067 aaKnown RBP20.57■□□□□ 0.88
TRAF4-203ENST00000394925 ZFPM2Q8WW38 1151 aa20.57■□□□□ 0.88
TRAF4-203ENST00000394925 IQCDQ96DY2 449 aa20.57■□□□□ 0.88
TRAF4-203ENST00000394925 NLNQ9BYT8 704 aa20.57■□□□□ 0.88
TRAF4-203ENST00000394925 KIR3DX1Q9H7L2 352 aa20.57■□□□□ 0.88
TRAF4-203ENST00000394925 FANCEQ9HB96 536 aa20.57■□□□□ 0.88
TRAF4-203ENST00000394925 HACD3Q9P035 362 aa20.57■□□□□ 0.88
TRAF4-203ENST00000394925 SAE1Q9UBE0 346 aaPredicted RBP20.57■□□□□ 0.88
TRAF4-203ENST00000394925 PKP3Q9Y446 797 aa20.57■□□□□ 0.88
TRAF4-203ENST00000394925 MGAT4DA6NG13 374 aa20.56■□□□□ 0.88
TRAF4-203ENST00000394925 SLC9B1P1A6NJY1 282 aa20.56■□□□□ 0.88
TRAF4-203ENST00000394925 CDH3P22223 829 aa20.56■□□□□ 0.88
TRAF4-203ENST00000394925 COL8A1P27658 744 aa20.56■□□□□ 0.88
TRAF4-203ENST00000394925 VAV2P52735 878 aa20.56■□□□□ 0.88
TRAF4-203ENST00000394925 PRKD1Q15139 912 aaPredicted RBP20.56■□□□□ 0.88
TRAF4-203ENST00000394925 SLC18A3Q16572 532 aa20.56■□□□□ 0.88
TRAF4-203ENST00000394925 OR4E2Q8NGC2 313 aa20.56■□□□□ 0.88
TRAF4-203ENST00000394925 SLC35G2Q8TBE7 412 aa20.56■□□□□ 0.88
TRAF4-203ENST00000394925 PNPLA2Q96AD5 504 aa20.56■□□□□ 0.88
TRAF4-203ENST00000394925 MRGPRX2Q96LB1 330 aa20.56■□□□□ 0.88
TRAF4-203ENST00000394925 GPR83Q9NYM4 423 aa20.56■□□□□ 0.88
TRAF4-203ENST00000394925 ACSL5Q9ULC5 683 aa20.56■□□□□ 0.88
TRAF4-203ENST00000394925 PIKFYVEQ9Y2I7 2098 aa20.56■□□□□ 0.88
TRAF4-203ENST00000394925 EPOP01588 193 aa20.55■□□□□ 0.88
TRAF4-203ENST00000394925 CAPN1P07384 714 aa20.55■□□□□ 0.88
TRAF4-203ENST00000394925 SLC35G4P0C7Q5 338 aa20.55■□□□□ 0.88
TRAF4-203ENST00000394925 TMEM253P0C7T8 217 aa20.55■□□□□ 0.88
TRAF4-203ENST00000394925 TNNT1P13805 278 aa20.55■□□□□ 0.88
TRAF4-203ENST00000394925 HLA-DPA1P20036 260 aa20.55■□□□□ 0.88
TRAF4-203ENST00000394925 RORAP35398 523 aa20.55■□□□□ 0.88
TRAF4-203ENST00000394925 TPM4P67936 248 aa20.55■□□□□ 0.88
TRAF4-203ENST00000394925 WASHC5Q12768 1159 aa20.55■□□□□ 0.88
TRAF4-203ENST00000394925 PRKAA1Q13131 559 aa20.55■□□□□ 0.88
TRAF4-203ENST00000394925 RAPSNQ13702 412 aa20.55■□□□□ 0.88
TRAF4-203ENST00000394925 KRT33BQ14525 404 aa20.55■□□□□ 0.88
TRAF4-203ENST00000394925 GSE1Q14687 1217 aa20.55■□□□□ 0.88
TRAF4-203ENST00000394925 PTPRCAPQ14761 206 aa20.55■□□□□ 0.88
TRAF4-203ENST00000394925 SLC1A5Q15758 541 aa20.55■□□□□ 0.88
TRAF4-203ENST00000394925 ZNF787Q6DD87 383 aa20.55■□□□□ 0.88
TRAF4-203ENST00000394925 MED25Q71SY5 747 aa20.55■□□□□ 0.88
TRAF4-203ENST00000394925 LUZP1Q86V48 1076 aa20.55■□□□□ 0.88
TRAF4-203ENST00000394925 HPS6Q86YV9 775 aa20.55■□□□□ 0.88
TRAF4-203ENST00000394925 ZBTB2Q8N680 514 aa20.55■□□□□ 0.88
TRAF4-203ENST00000394925 TMEM102Q8N9M5 508 aaPredicted RBP20.55■□□□□ 0.88
TRAF4-203ENST00000394925 IPMKQ8NFU5 416 aa20.55■□□□□ 0.88
TRAF4-203ENST00000394925 OR2L2Q8NH16 312 aa20.55■□□□□ 0.88
TRAF4-203ENST00000394925 OR1L3Q8NH93 324 aa20.55■□□□□ 0.88
TRAF4-203ENST00000394925 ZNF398Q8TD17 642 aa20.55■□□□□ 0.88
TRAF4-203ENST00000394925 TFB1MQ8WVM0 346 aaKnown RBP20.55■□□□□ 0.88
TRAF4-203ENST00000394925 C19orf60Q96EN9 201 aa20.55■□□□□ 0.88
TRAF4-203ENST00000394925 ACTR5Q9H9F9 607 aaPredicted RBP20.55■□□□□ 0.88
TRAF4-203ENST00000394925 PCMTD2Q9NV79 361 aa20.55■□□□□ 0.88
TRAF4-203ENST00000394925 SMOXQ9NWM0 555 aa20.55■□□□□ 0.88
TRAF4-203ENST00000394925 COLEC10Q9Y6Z7 277 aa20.55■□□□□ 0.88
TRAF4-203ENST00000394925 LRBAP50851 2863 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms