RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 SLC4A9Q96Q91 983 aa12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 DCLRE1CQ96SD1 692 aaKnown RBP12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 SLC30A2Q9BRI3 323 aa12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 DPCDQ9BVM2 203 aaPredicted RBP12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 TTYH1Q9H313 450 aaPredicted RBP12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 SIRT5Q9NXA8 310 aa12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 KCTD5Q9NXV2 234 aa12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 RUVBL2Q9Y230 463 aaKnown RBP12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 RNF6Q9Y252 685 aa12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 MEIS2O14770 477 aa12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 SCAMP3O14828 347 aaKnown RBP12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 ANGPT2O15123 496 aa12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 RPL9P32969 192 aaKnown RBP12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 TNFSF8P32971 234 aa12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 TRIM23P36406 574 aa12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 RARRES1P49788 294 aa12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 ABATP80404 500 aa12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 HYAL2Q12891 473 aa12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 IL18R1Q13478 541 aa12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 TATDN3Q17R31 274 aa12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 QRICH1Q2TAL8 776 aa12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 ZC3H12BQ5HYM0 836 aaKnown RBP12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 METTL11BQ5VVY1 283 aa12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 ZFPM2Q8WW38 1151 aa12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 LPPQ93052 612 aa12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 UBXN10Q96LJ8 280 aa12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 FAM213AQ9BRX8 229 aa12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 GTPBP2Q9BX10 602 aaKnown RBP12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 C11orf54Q9H0W9 315 aaPredicted RBP12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 OSBPL2Q9H1P3 480 aa12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 APOBEC3GQ9HC16 384 aaKnown RBP12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 USE1Q9NZ43 259 aa12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 SLAMF8Q9P0V8 285 aa12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 XPR1Q9UBH6 696 aa12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 PCDHB14Q9Y5E9 798 aa12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 CLCA3PQ9Y6N3 262 aa12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 KIAA1551Q9HCM1 1747 aa12.36□□□□□ -0.43
SLC28A1-203ENST00000394573 GNGT2O14610 69 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 SIGLEC5O15389 551 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 TRAPPC2P0DI81 140 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 TRAPPC2BP0DI82 140 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 SLURP2P0DP57 97 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 TNNI1P19237 187 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 ACO1P21399 889 aaKnown RBP12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 SSTR2P30874 369 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 HSD17B2P37059 387 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 MAGEA3P43357 314 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 DGKQP52824 942 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 GBX2P52951 348 aaPredicted RBP12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 CDH13P55290 713 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 WNT7BP56706 349 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 CYP4F2P78329 520 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 CYP4F3Q08477 520 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 SIGLEC14Q08ET2 396 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 SEMA3BQ13214 749 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 ARMCX4Q5H9R4 360 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 ZYG11AQ6WRX3 759 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 OTOP2Q7RTS6 562 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 C9orf62Q8N4C0 152 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 DNAJA4Q8WW22 397 aaPredicted RBP12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 RBPMSQ93062 196 aaKnown RBP12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 PTP4A1Q93096 173 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.35□□□□□ -0.431e-7■■■■■ 35.3
SLC28A1-203ENST00000394573 AURKBQ96GD4 344 aaPredicted RBP12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 PEBP4Q96S96 227 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 CNPY3Q9BT09 278 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 ANKHQ9HCJ1 492 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 AMBNQ9NP70 447 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 VPS9D1Q9Y2B5 631 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 PCDHGB2Q9Y5G2 931 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 PEX16Q9Y5Y5 336 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 ALG5Q9Y673 324 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 SPDYE2BA6NHP3 402 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 ASB14A6NK59 587 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 FAM20BO75063 409 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 SLC10A3P09131 477 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 SPDYE6P0CI01 402 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 SPDYE2Q495Y8 402 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 TOR1AIP1Q5JTV8 583 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 SYVN1Q86TM6 617 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 GPR151Q8TDV0 419 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 MYOCQ99972 504 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 RACGAP1Q9H0H5 632 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 RNF121Q9H920 327 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 IL1RAPQ9NPH3 570 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 KCNH7Q9NS40 1196 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 PNMA8CA0A1B0GUJ8 204 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 SLCO1B7G3V0H7 640 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 LGALS8O00214 317 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 BCKDKO14874 412 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 PRSS23O95084 383 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 HMGN1P05114 100 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 ALDOCP09972 364 aaKnown RBP12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 HSD17B1P14061 328 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 MAOBP27338 520 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 SSTR4P31391 388 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 RPS5P46782 204 aaKnown RBP12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 TGM4P49221 684 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 SLC35A2P78381 396 aa12.35□□□□□ -0.43
SLC28A1-203ENST00000394573 RPA4Q13156 261 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms