RNA–Protein interactions for RNA: ENST00000393196.7

NME1-203, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-203ENST00000393196 C12orf66Q96MD2 445 aa18.33■□□□□ 0.52
NME1-203ENST00000393196 FAM167BQ9BTA0 163 aa18.33■□□□□ 0.52
NME1-203ENST00000393196 WWP1Q9H0M0 922 aa18.33■□□□□ 0.52
NME1-203ENST00000393196 CCDC86Q9H6F5 360 aaKnown RBP18.33■□□□□ 0.52
NME1-203ENST00000393196 POLR1BQ9H9Y6 1135 aa18.33■□□□□ 0.52
NME1-203ENST00000393196 IMP3Q9NV31 184 aaKnown RBP18.33■□□□□ 0.52
NME1-203ENST00000393196 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.33■□□□□ 0.52
NME1-203ENST00000393196 MARCH4Q9P2E8 410 aaPredicted RBP18.33■□□□□ 0.52
NME1-203ENST00000393196 FAM8A1Q9UBU6 413 aa18.33■□□□□ 0.52
NME1-203ENST00000393196 ENTPD2Q9Y5L3 495 aa18.33■□□□□ 0.52
NME1-203ENST00000393196 FAM169AQ9Y6X4 670 aa18.33■□□□□ 0.52
NME1-203ENST00000393196 ASXL3Q9C0F0 2248 aa18.33■□□□□ 0.52
NME1-203ENST00000393196 OR52A4PA6NMU1 304 aa18.32■□□□□ 0.52
NME1-203ENST00000393196 HGSO14964 777 aaPredicted RBP18.32■□□□□ 0.52
NME1-203ENST00000393196 KDM1AO60341 852 aa18.32■□□□□ 0.52
NME1-203ENST00000393196 OR1I1O60431 355 aa18.32■□□□□ 0.52
NME1-203ENST00000393196 ESR1P03372 595 aa18.32■□□□□ 0.52
NME1-203ENST00000393196 APOA4P06727 396 aa18.32■□□□□ 0.52
NME1-203ENST00000393196 LSSP48449 732 aa18.32■□□□□ 0.52
NME1-203ENST00000393196 ZFP36L1Q07352 338 aaKnown RBP18.32■□□□□ 0.52
NME1-203ENST00000393196 C2orf54Q08AI8 447 aa18.32■□□□□ 0.52
NME1-203ENST00000393196 CLCA4Q14CN2 919 aa18.32■□□□□ 0.52
NME1-203ENST00000393196 BBS9Q3SYG4 887 aa18.32■□□□□ 0.52
NME1-203ENST00000393196 CAPRIN2Q6IMN6 1127 aaKnown RBP18.32■□□□□ 0.52
NME1-203ENST00000393196 TMEM71Q6P5X7 295 aa18.32■□□□□ 0.52
NME1-203ENST00000393196 IGF2-ASQ6U949 168 aa18.32■□□□□ 0.52
NME1-203ENST00000393196 CES3Q6UWW8 571 aa18.32■□□□□ 0.52
NME1-203ENST00000393196 SLITRK4Q8IW52 837 aa18.32■□□□□ 0.52
NME1-203ENST00000393196 GSDMBQ8TAX9 411 aa18.32■□□□□ 0.52
NME1-203ENST00000393196 TMEM121BQ9BXQ6 578 aaPredicted RBP18.32■□□□□ 0.52
NME1-203ENST00000393196 TRIM31Q9BZY9 425 aa18.32■□□□□ 0.52
NME1-203ENST00000393196 MVB12BQ9H7P6 319 aa18.32■□□□□ 0.52
NME1-203ENST00000393196 C20orf96Q9NUD7 363 aaPredicted RBP18.32■□□□□ 0.52
NME1-203ENST00000393196 PSMD13Q9UNM6 376 aa18.32■□□□□ 0.52
NME1-203ENST00000393196 WDR37Q9Y2I8 494 aa18.32■□□□□ 0.52
NME1-203ENST00000393196 PCDHGA8Q9Y5G5 932 aa18.32■□□□□ 0.52
NME1-203ENST00000393196 ARHGEF17Q96PE2 2063 aaPredicted RBP18.32■□□□□ 0.52
NME1-203ENST00000393196 ZCWPW2A0A1B0GU75 182 aa18.31■□□□□ 0.52
NME1-203ENST00000393196 UBA6A0AVT1 1052 aaPredicted RBP18.31■□□□□ 0.52
NME1-203ENST00000393196 RAD51CO43502 376 aa18.31■□□□□ 0.52
NME1-203ENST00000393196 UBXN7O94888 489 aa18.31■□□□□ 0.52
NME1-203ENST00000393196 AMD1P17707 334 aa18.31■□□□□ 0.52
NME1-203ENST00000393196 RPL21P46778 160 aaKnown RBP18.31■□□□□ 0.52
NME1-203ENST00000393196 CBLBQ13191 982 aa18.31■□□□□ 0.52
NME1-203ENST00000393196 SEMA3AQ14563 771 aa18.31■□□□□ 0.52
NME1-203ENST00000393196 CRYMQ14894 314 aa18.31■□□□□ 0.52
NME1-203ENST00000393196 KCTD19Q17RG1 926 aaPredicted RBP18.31■□□□□ 0.52
NME1-203ENST00000393196 ZNF658BQ4V348 819 aaPredicted RBP18.31■□□□□ 0.52
NME1-203ENST00000393196 PHF19Q5T6S3 580 aa18.31■□□□□ 0.52
NME1-203ENST00000393196 ZNF470Q6ECI4 717 aa18.31■□□□□ 0.52
NME1-203ENST00000393196 USP53Q70EK8 1073 aa18.31■□□□□ 0.52
NME1-203ENST00000393196 PDZD3Q86UT5 571 aa18.31■□□□□ 0.52
NME1-203ENST00000393196 CILP2Q8IUL8 1156 aa18.31■□□□□ 0.52
NME1-203ENST00000393196 CCDC97Q96F63 343 aaPredicted RBP18.31■□□□□ 0.52
NME1-203ENST00000393196 ATXN7L3BQ96GX2 97 aa18.31■□□□□ 0.52
NME1-203ENST00000393196 RMDN2Q96LZ7 410 aa18.31■□□□□ 0.52
NME1-203ENST00000393196 CMKLR1Q99788 373 aa18.31■□□□□ 0.52
NME1-203ENST00000393196 OR52A5Q9H2C5 316 aa18.31■□□□□ 0.52
NME1-203ENST00000393196 MRFAP1Q9Y605 127 aa18.31■□□□□ 0.52
NME1-203ENST00000393196 COMMD10Q9Y6G5 202 aa18.31■□□□□ 0.52
NME1-203ENST00000393196 AK5Q9Y6K8 562 aa18.31■□□□□ 0.52
NME1-203ENST00000393196 PRSS21Q9Y6M0 314 aa18.31■□□□□ 0.52
NME1-203ENST00000393196 DXOO77932 396 aaKnown RBP18.3■□□□□ 0.52
NME1-203ENST00000393196 RPN2P04844 631 aa18.3■□□□□ 0.52
NME1-203ENST00000393196 RBMS1P29558 406 aaKnown RBP18.3■□□□□ 0.52
NME1-203ENST00000393196 PDX1P52945 283 aa18.3■□□□□ 0.52
NME1-203ENST00000393196 LIMK2P53671 638 aa18.3■□□□□ 0.52
NME1-203ENST00000393196 DHX9Q08211 1270 aaKnown RBP18.3■□□□□ 0.52
NME1-203ENST00000393196 BOP1Q14137 746 aaKnown RBP18.3■□□□□ 0.52
NME1-203ENST00000393196 GPR18Q14330 331 aa18.3■□□□□ 0.52
NME1-203ENST00000393196 PLCL1Q15111 1095 aa18.3■□□□□ 0.52
NME1-203ENST00000393196 DUPD1Q68J44 220 aa18.3■□□□□ 0.52
NME1-203ENST00000393196 C8orf74Q6P047 294 aa18.3■□□□□ 0.52
NME1-203ENST00000393196 KIAA0408Q6ZU52 694 aa18.3■□□□□ 0.52
NME1-203ENST00000393196 CENPUQ71F23 418 aa18.3■□□□□ 0.52
NME1-203ENST00000393196 KDF1Q8NAX2 398 aaPredicted RBP18.3■□□□□ 0.52
NME1-203ENST00000393196 LPGAT1Q92604 370 aa18.3■□□□□ 0.52
NME1-203ENST00000393196 ZDHHC12Q96GR4 267 aa18.3■□□□□ 0.52
NME1-203ENST00000393196 FCRL3Q96P31 734 aaPredicted RBP18.3■□□□□ 0.52
NME1-203ENST00000393196 INSM2Q96T92 566 aaPredicted RBP18.3■□□□□ 0.52
NME1-203ENST00000393196 PHACTR1Q9C0D0 580 aa18.3■□□□□ 0.52
NME1-203ENST00000393196 P2RY12Q9H244 342 aa18.3■□□□□ 0.52
NME1-203ENST00000393196 CCDC68Q9H2F9 335 aa18.3■□□□□ 0.52
NME1-203ENST00000393196 KIR3DX1Q9H7L2 352 aa18.3■□□□□ 0.52
NME1-203ENST00000393196 RDH14Q9HBH5 336 aa18.3■□□□□ 0.52
NME1-203ENST00000393196 PDP2Q9P2J9 529 aa18.3■□□□□ 0.52
NME1-203ENST00000393196 ZC3H7BQ9UGR2 993 aaKnown RBP18.3■□□□□ 0.52
NME1-203ENST00000393196 ATXN7L1Q9ULK2 861 aaPredicted RBP18.3■□□□□ 0.52
NME1-203ENST00000393196 SNX24Q9Y343 169 aa18.3■□□□□ 0.52
NME1-203ENST00000393196 SLC5A10A0PJK1 596 aa18.29■□□□□ 0.52
NME1-203ENST00000393196 PLD2O14939 933 aa18.29■□□□□ 0.52
NME1-203ENST00000393196 EIF3HO15372 352 aaKnown RBP eCLIP18.29■□□□□ 0.52
NME1-203ENST00000393196 TOX3O15405 576 aaPredicted RBP18.29■□□□□ 0.52
NME1-203ENST00000393196 MAPK9P45984 424 aa18.29■□□□□ 0.52
NME1-203ENST00000393196 EIF3BP55884 814 aaKnown RBP18.29■□□□□ 0.52
NME1-203ENST00000393196 GABREP78334 506 aa18.29■□□□□ 0.52
NME1-203ENST00000393196 ILF2Q12905 390 aaKnown RBP18.29■□□□□ 0.52
NME1-203ENST00000393196 FRG1Q14331 258 aaKnown RBP18.29■□□□□ 0.52
NME1-203ENST00000393196 RAB11FIP2Q7L804 512 aa18.29■□□□□ 0.52
NME1-203ENST00000393196 LDB1Q86U70 411 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms