RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 CCDC81Q6ZN84 652 aa10.39□□□□□ -0.75
CALD1-203ENST00000393118 USP45Q70EL2 814 aa10.39□□□□□ -0.75
CALD1-203ENST00000393118 ANKRD46Q86W74 232 aa10.39□□□□□ -0.75
CALD1-203ENST00000393118 ZDHHC13Q8IUH4 622 aa10.39□□□□□ -0.75
CALD1-203ENST00000393118 FIBCD1Q8N539 461 aa10.39□□□□□ -0.75
CALD1-203ENST00000393118 GANCQ8TET4 914 aa10.39□□□□□ -0.75
CALD1-203ENST00000393118 SH3KBP1Q96B97 665 aa10.39□□□□□ -0.75
CALD1-203ENST00000393118 C3orf30Q96M34 536 aa10.39□□□□□ -0.75
CALD1-203ENST00000393118 ZNF599Q96NL3 588 aa10.39□□□□□ -0.75
CALD1-203ENST00000393118 NSUN3Q9H649 340 aaKnown RBP10.39□□□□□ -0.75
CALD1-203ENST00000393118 ZNF490Q9ULM2 529 aaPredicted RBP10.39□□□□□ -0.75
CALD1-203ENST00000393118 PCNTO95613 3336 aa10.39□□□□□ -0.75
CALD1-203ENST00000393118 KNL1Q8NG31 2342 aa10.39□□□□□ -0.75
CALD1-203ENST00000393118 GNG14A0A1W2PPG7 69 aa10.39□□□□□ -0.75
CALD1-203ENST00000393118 FUOMA2VDF0 154 aa10.39□□□□□ -0.75
CALD1-203ENST00000393118 LCHNA4D1U4 455 aa10.39□□□□□ -0.75
CALD1-203ENST00000393118 HS6ST1O60243 411 aa10.39□□□□□ -0.75
CALD1-203ENST00000393118 CLDN7O95471 211 aa10.39□□□□□ -0.75
CALD1-203ENST00000393118 EPOP01588 193 aa10.39□□□□□ -0.75
CALD1-203ENST00000393118 SLC6A4P31645 630 aa10.39□□□□□ -0.75
CALD1-203ENST00000393118 SNRPD1P62314 119 aaKnown RBP10.39□□□□□ -0.75
CALD1-203ENST00000393118 ZNF621Q6ZSS3 439 aa10.39□□□□□ -0.75
CALD1-203ENST00000393118 GLMNQ92990 594 aa10.39□□□□□ -0.75
CALD1-203ENST00000393118 PYCR2Q96C36 320 aa10.39□□□□□ -0.75
CALD1-203ENST00000393118 ATG10Q9H0Y0 220 aa10.39□□□□□ -0.75
CALD1-203ENST00000393118 GSTO2Q9H4Y5 243 aa10.39□□□□□ -0.75
CALD1-203ENST00000393118 SPASTQ9UBP0 616 aa10.39□□□□□ -0.75
CALD1-203ENST00000393118 KPNA3O00505 521 aaPredicted RBP10.38□□□□□ -0.75
CALD1-203ENST00000393118 CLIC3O95833 236 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 NTRK1P04629 796 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 SERPINB10P48595 397 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 LSM3P62310 102 aaKnown RBP10.38□□□□□ -0.75
CALD1-203ENST00000393118 DSC3Q14574 896 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 STARD3Q14849 445 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 NDUFA5Q16718 116 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 ZNF284Q2VY69 593 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 FAAH2Q6GMR7 532 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 PGM2L1Q6PCE3 622 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 SPATA19Q7Z5L4 167 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 CNTN4Q8IWV2 1026 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 ROPN1LQ96C74 230 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 SLC39A13Q96H72 371 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 PPP3R2Q96LZ3 170 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 DEPDC7Q96QD5 511 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 OR52E6Q96RD3 313 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 DGCR6LQ9BY27 220 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 ZNF840PA6NDX5 716 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 ZNF195O14628 629 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 KDELR3O43731 214 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 MTX2O75431 263 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 MSH3P20585 1137 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 DNAJB1P25685 340 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 PRDX3P30048 256 aaKnown RBP10.38□□□□□ -0.75
CALD1-203ENST00000393118 SLC7A1P30825 629 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 IRF8Q02556 426 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 ILF2Q12905 390 aaKnown RBP10.38□□□□□ -0.75
CALD1-203ENST00000393118 PIANPQ8IYJ0 282 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 PARP8Q8N3A8 854 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 MCOLN3Q8TDD5 553 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 ELMO1Q92556 727 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 PLD4Q96BZ4 506 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 CEP19Q96LK0 163 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 KLHL32Q96NJ5 620 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 MEAF6Q9HAF1 191 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 ABCB10Q9NRK6 738 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 PNPLA3Q9NST1 481 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 WDR70Q9NW82 654 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 SH3BP4Q9P0V3 963 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 GMPR2Q9P2T1 348 aaKnown RBP10.38□□□□□ -0.75
CALD1-203ENST00000393118 SUCOQ9UBS9 1254 aaKnown RBP10.38□□□□□ -0.75
CALD1-203ENST00000393118 OAZ3Q9UMX2 235 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 A0A1W2PPW3 197 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 NEDD8-MDP1E9PL57 170 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 FFAR2O15552 330 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 ARHGEF9O43307 516 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 NBNO60934 754 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 STC2O76061 302 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 WDR47O94967 919 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 SERPIND1P05546 499 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 RING1Q06587 406 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 ABRQ12979 859 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 TGFBIQ15582 683 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 BHLHA9Q7RTU4 235 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 TMEM173Q86WV6 379 aaPredicted RBP10.38□□□□□ -0.75
CALD1-203ENST00000393118 HORMAD1Q86X24 394 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 OR52B6Q8NGF0 335 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 BBS2Q9BXC9 721 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 SACM1LQ9NTJ5 587 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 NLE1Q9NVX2 485 aaPredicted RBP10.38□□□□□ -0.75
CALD1-203ENST00000393118 GON4LQ3T8J9 2241 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 TNS1Q9HBL0 1735 aaKnown RBP10.38□□□□□ -0.75
CALD1-203ENST00000393118 A0A1W2PQ67 120 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 CCRL2O00421 344 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 FDXRP22570 491 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 TCEA1P23193 301 aaKnown RBP10.38□□□□□ -0.75
CALD1-203ENST00000393118 MAGEA12P43365 314 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 CCT8P50990 548 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 MGAT3Q09327 533 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 LRRC74AQ0VAA2 488 aa10.38□□□□□ -0.75
CALD1-203ENST00000393118 FAM174BQ3ZCQ3 159 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms