RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 PHTF2Q8N3S3 785 aa16.26■□□□□ 0.19
SNX9-201ENST00000392185 OR9I1Q8NGQ6 314 aa16.26■□□□□ 0.19
SNX9-201ENST00000392185 STARD8Q92502 1023 aa16.26■□□□□ 0.19
SNX9-201ENST00000392185 PTCD3Q96EY7 689 aaKnown RBP16.26■□□□□ 0.19
SNX9-201ENST00000392185 CCDC177Q9NQR7 707 aaPredicted RBP16.26■□□□□ 0.19
SNX9-201ENST00000392185 H2AFY2Q9P0M6 372 aaPredicted RBP16.26■□□□□ 0.19
SNX9-201ENST00000392185 SLC22A14Q9Y267 594 aa16.26■□□□□ 0.19
SNX9-201ENST00000392185 PFDN1O60925 122 aa16.26■□□□□ 0.19
SNX9-201ENST00000392185 CLPTM1O96005 669 aa16.26■□□□□ 0.19
SNX9-201ENST00000392185 ANXA4P09525 319 aaPredicted RBP16.26■□□□□ 0.19
SNX9-201ENST00000392185 DAB2P98082 770 aa16.26■□□□□ 0.19
SNX9-201ENST00000392185 TMED1Q13445 227 aa16.26■□□□□ 0.19
SNX9-201ENST00000392185 KHDC1Q4VXA5 237 aaKnown RBP16.26■□□□□ 0.19
SNX9-201ENST00000392185 ZNF789Q5FWF6 425 aa16.26■□□□□ 0.19
SNX9-201ENST00000392185 SNAP47Q5SQN1 464 aa16.26■□□□□ 0.19
SNX9-201ENST00000392185 TMEM26Q6ZUK4 368 aa16.26■□□□□ 0.19
SNX9-201ENST00000392185 PAGE2Q7Z2X7 111 aa16.26■□□□□ 0.19
SNX9-201ENST00000392185 TCAIMQ8N3R3 496 aa16.26■□□□□ 0.19
SNX9-201ENST00000392185 C12orf66Q96MD2 445 aa16.26■□□□□ 0.19
SNX9-201ENST00000392185 FBRSL1Q9HCM7 1045 aaKnown RBP16.26■□□□□ 0.19
SNX9-201ENST00000392185 MARCH5Q9NX47 278 aa16.26■□□□□ 0.19
SNX9-201ENST00000392185 HEPACAM2A8MVW5 462 aa16.26■□□□□ 0.19
SNX9-201ENST00000392185 PTGES3LE9PB15 166 aa16.26■□□□□ 0.19
SNX9-201ENST00000392185 KERAO60938 352 aa16.26■□□□□ 0.19
SNX9-201ENST00000392185 TIPRLO75663 272 aa16.26■□□□□ 0.19
SNX9-201ENST00000392185 RECQL5O94762 991 aaPredicted RBP16.26■□□□□ 0.19
SNX9-201ENST00000392185 PREPP48147 710 aa16.26■□□□□ 0.19
SNX9-201ENST00000392185 LRRC26Q2I0M4 334 aa16.26■□□□□ 0.19
SNX9-201ENST00000392185 LPCAT4Q643R3 524 aa16.26■□□□□ 0.19
SNX9-201ENST00000392185 DHRSXQ8N5I4 330 aa16.26■□□□□ 0.19
SNX9-201ENST00000392185 OR2T12Q8NG77 320 aa16.26■□□□□ 0.19
SNX9-201ENST00000392185 SLC22A12Q96S37 553 aa16.26■□□□□ 0.19
SNX9-201ENST00000392185 OSBPL6Q9BZF3 934 aa16.26■□□□□ 0.19
SNX9-201ENST00000392185 RIBC2Q9H4K1 309 aa16.26■□□□□ 0.19
SNX9-201ENST00000392185 U3KQV3 271 aa16.26■□□□□ 0.19
SNX9-201ENST00000392185 TUBGCP6Q96RT7 1819 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 POP7O75817 140 aaKnown RBP16.25■□□□□ 0.19
SNX9-201ENST00000392185 PAK4O96013 591 aaPredicted RBP16.25■□□□□ 0.19
SNX9-201ENST00000392185 NTSP30990 170 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 VIPR1P32241 457 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 AGTR2P50052 363 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 RAB30Q15771 203 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 LDLRAP1Q5SW96 308 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 ZNF438Q7Z4V0 828 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 SPATA19Q7Z5L4 167 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 PPCDCQ96CD2 204 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 AIF1LQ9BQI0 150 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 ZCWPW2A0A1B0GU75 182 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 TTC34A8MYJ7 566 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 SERPINI2O75830 405 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 VIPP01282 170 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 GNAZP19086 355 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 ETV3P41162 512 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 CPTPQ5TA50 214 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 SPPL2CQ8IUH8 684 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 NXPE1Q8N323 547 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 SPACA7Q96KW9 195 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 NLE1Q9NVX2 485 aaPredicted RBP16.25■□□□□ 0.19
SNX9-201ENST00000392185 KLHL28Q9NXS3 571 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 TMEM98Q9Y2Y6 226 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 LCHNA4D1U4 455 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 SAP18O00422 153 aaKnown RBP16.25■□□□□ 0.19
SNX9-201ENST00000392185 SLC35E2BP0CK96 405 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 ACTR1BP42025 376 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 CLK1P49759 484 aaKnown RBP16.25■□□□□ 0.19
SNX9-201ENST00000392185 NEK2P51955 445 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 ACTR1AP61163 376 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 SMAD5Q99717 465 aaKnown RBP16.25■□□□□ 0.19
SNX9-201ENST00000392185 PPM1HQ9ULR3 514 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 NME7Q9Y5B8 376 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 SPO11Q9Y5K1 396 aa16.25■□□□□ 0.19
SNX9-201ENST00000392185 LRRC14BA6NHZ5 514 aa16.24■□□□□ 0.19
SNX9-201ENST00000392185 ATP1B2P14415 290 aaPredicted RBP16.24■□□□□ 0.19
SNX9-201ENST00000392185 ZNF37AP17032 561 aaPredicted RBP16.24■□□□□ 0.19
SNX9-201ENST00000392185 NELFEP18615 380 aaKnown RBP16.24■□□□□ 0.19
SNX9-201ENST00000392185 C2orf80Q0P641 193 aa16.24■□□□□ 0.19
SNX9-201ENST00000392185 ILF3Q12906 894 aaKnown RBP eCLIP16.24■□□□□ 0.19
SNX9-201ENST00000392185 DHCR24Q15392 516 aa16.24■□□□□ 0.19
SNX9-201ENST00000392185 FAM174BQ3ZCQ3 159 aa16.24■□□□□ 0.19
SNX9-201ENST00000392185 ZNF648Q5T619 568 aaPredicted RBP16.24■□□□□ 0.19
SNX9-201ENST00000392185 TAF8Q7Z7C8 310 aa16.24■□□□□ 0.19
SNX9-201ENST00000392185 TSPAN33Q86UF1 283 aa16.24■□□□□ 0.19
SNX9-201ENST00000392185 B4GALNT2Q8NHY0 566 aa16.24■□□□□ 0.19
SNX9-201ENST00000392185 NELL1Q92832 810 aa16.24■□□□□ 0.19
SNX9-201ENST00000392185 SLC39A3Q9BRY0 314 aa16.24■□□□□ 0.19
SNX9-201ENST00000392185 SLC46A2Q9BY10 475 aa16.24■□□□□ 0.19
SNX9-201ENST00000392185 AKTIPQ9H8T0 292 aa16.24■□□□□ 0.19
SNX9-201ENST00000392185 SIRPGQ9P1W8 387 aa16.24■□□□□ 0.19
SNX9-201ENST00000392185 GUCY1B2O75343 617 aa16.24■□□□□ 0.19
SNX9-201ENST00000392185 S1PR4O95977 384 aa16.24■□□□□ 0.19
SNX9-201ENST00000392185 C8GP07360 202 aa16.24■□□□□ 0.19
SNX9-201ENST00000392185 FGF3P11487 239 aaPredicted RBP16.24■□□□□ 0.19
SNX9-201ENST00000392185 CSTF3Q12996 717 aaKnown RBP16.24■□□□□ 0.19
SNX9-201ENST00000392185 ZC3H12BQ5HYM0 836 aaKnown RBP16.24■□□□□ 0.19
SNX9-201ENST00000392185 FAM26DQ5JW98 314 aa16.24■□□□□ 0.19
SNX9-201ENST00000392185 CHSY3Q70JA7 882 aa16.24■□□□□ 0.19
SNX9-201ENST00000392185 LIX1Q8N485 282 aa16.24■□□□□ 0.19
SNX9-201ENST00000392185 CHST14Q8NCH0 376 aa16.24■□□□□ 0.19
SNX9-201ENST00000392185 EME2A4GXA9 379 aaPredicted RBP16.24■□□□□ 0.19
SNX9-201ENST00000392185 LRRC72A6NJI9 287 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms