RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 MROH8Q9H579 483 aa0.6□□□□□ -2.31
SNORA40-201ENST00000388090 MED20Q9H944 212 aa0.6□□□□□ -2.31
SNORA40-201ENST00000388090 CHODLQ9H9P2 273 aa0.6□□□□□ -2.31
SNORA40-201ENST00000388090 IL1RAPL1Q9NZN1 696 aa0.6□□□□□ -2.31
SNORA40-201ENST00000388090 ZNF69Q9UC07 566 aa0.6□□□□□ -2.31
SNORA40-201ENST00000388090 GDAQ9Y2T3 454 aa0.6□□□□□ -2.31
SNORA40-201ENST00000388090 NAALAD2Q9Y3Q0 740 aa0.6□□□□□ -2.31
SNORA40-201ENST00000388090 GAKO14976 1311 aa0.6□□□□□ -2.31
SNORA40-201ENST00000388090 TRIM49BA6NDI0 452 aa0.59□□□□□ -2.31
SNORA40-201ENST00000388090 ERVV-1B6SEH8 477 aa0.59□□□□□ -2.31
SNORA40-201ENST00000388090 SLC33A1O00400 549 aaPredicted RBP0.59□□□□□ -2.31
SNORA40-201ENST00000388090 APAF1O14727 1248 aa0.59□□□□□ -2.31
SNORA40-201ENST00000388090 POP4O95707 220 aaKnown RBP0.59□□□□□ -2.31
SNORA40-201ENST00000388090 ELK1P19419 428 aa0.59□□□□□ -2.31
SNORA40-201ENST00000388090 EFNA1P20827 205 aaPredicted RBP0.59□□□□□ -2.31
SNORA40-201ENST00000388090 CST5P28325 142 aaPredicted RBP0.59□□□□□ -2.31
SNORA40-201ENST00000388090 OXTRP30559 389 aa0.59□□□□□ -2.31
SNORA40-201ENST00000388090 HOXC9P31274 260 aa0.59□□□□□ -2.31
SNORA40-201ENST00000388090 SOX3P41225 446 aa0.59□□□□□ -2.31
SNORA40-201ENST00000388090 LMAN1P49257 510 aa0.59□□□□□ -2.31
SNORA40-201ENST00000388090 LONRF1Q17RB8 773 aa0.59□□□□□ -2.31
SNORA40-201ENST00000388090 MTHFSDQ2M296 383 aaKnown RBP0.59□□□□□ -2.31
SNORA40-201ENST00000388090 USP41Q3LFD5 358 aa0.59□□□□□ -2.31
SNORA40-201ENST00000388090 COBLL1Q53SF7 1204 aa0.59□□□□□ -2.31
SNORA40-201ENST00000388090 UTF1Q5T230 341 aa0.59□□□□□ -2.31
SNORA40-201ENST00000388090 KRTAP5-10Q6L8G5 202 aa0.59□□□□□ -2.31
SNORA40-201ENST00000388090 REG3GQ6UW15 175 aa0.59□□□□□ -2.31
SNORA40-201ENST00000388090 TIFABQ6ZNK6 161 aa0.59□□□□□ -2.31
SNORA40-201ENST00000388090 ZNF561Q8N587 486 aa0.59□□□□□ -2.31
SNORA40-201ENST00000388090 SLC5A8Q8N695 610 aa0.59□□□□□ -2.31
SNORA40-201ENST00000388090 C11orf65Q8NCR3 313 aa0.59□□□□□ -2.31
SNORA40-201ENST00000388090 HERVK_113Q902F9 699 aa0.59□□□□□ -2.31
SNORA40-201ENST00000388090 PABPC5Q96DU9 382 aaKnown RBP0.59□□□□□ -2.31
SNORA40-201ENST00000388090 CALML4Q96GE6 196 aa0.59□□□□□ -2.31
SNORA40-201ENST00000388090 CCDC138Q96M89 665 aa0.59□□□□□ -2.31
SNORA40-201ENST00000388090 EYA3Q99504 573 aa0.59□□□□□ -2.31
SNORA40-201ENST00000388090 HEMGNQ9BXL5 484 aa0.59□□□□□ -2.31
SNORA40-201ENST00000388090 TDRD1Q9BXT4 1180 aaKnown RBP0.59□□□□□ -2.31
SNORA40-201ENST00000388090 GLIS2Q9BZE0 524 aaPredicted RBP0.59□□□□□ -2.31
SNORA40-201ENST00000388090 KRT84Q9NSB2 600 aa0.59□□□□□ -2.31
SNORA40-201ENST00000388090 ADAM22Q9P0K1 906 aa0.59□□□□□ -2.31
SNORA40-201ENST00000388090 ABCD2Q9UBJ2 740 aa0.59□□□□□ -2.31
SNORA40-201ENST00000388090 ITGB4P16144 1822 aa0.59□□□□□ -2.32
SNORA40-201ENST00000388090 RALGAPA1Q6GYQ0 2036 aa0.59□□□□□ -2.32
SNORA40-201ENST00000388090 LOC105371242A0A075B767 164 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 A0A1W2PR80 420 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 ACKR2O00590 384 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 ANP32CO43423 234 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 TACC1O75410 805 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 GALTP07902 379 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 PDIA3P30101 505 aaKnown RBP0.58□□□□□ -2.32
SNORA40-201ENST00000388090 TECP42680 631 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 KLHL26Q53HC5 615 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 C6orf141Q5SZD1 244 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 FAM83BQ5T0W9 1011 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 DENND5BQ6ZUT9 1274 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 BTN2A1Q7KYR7 527 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 CATSPERDQ86XM0 798 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 HSCBQ8IWL3 235 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 METTL4Q8N3J2 472 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 C1orf52Q8N6N3 182 aaKnown RBP0.58□□□□□ -2.32
SNORA40-201ENST00000388090 L3MBTL4Q8NA19 623 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 SLC38A9Q8NBW4 561 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 PPP4R1Q8TF05 950 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 ZNF486Q96H40 463 aaPredicted RBP0.58□□□□□ -2.32
SNORA40-201ENST00000388090 TNIP3Q96KP6 325 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 ZNF597Q96LX8 424 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 CD180Q99467 661 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 PCGF1Q9BSM1 259 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 ADNPQ9H2P0 1102 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 ARFGAP3Q9NP61 516 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 ACKR4Q9NPB9 350 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 OLFML3Q9NRN5 406 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 C20orf141Q9NUB4 165 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 ZNF581Q9P0T4 197 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 THAP10Q9P2Z0 257 aaPredicted RBP0.58□□□□□ -2.32
SNORA40-201ENST00000388090 HSPB7Q9UBY9 170 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 ZNF282Q9UDV7 671 aaPredicted RBP0.58□□□□□ -2.32
SNORA40-201ENST00000388090 SUFUQ9UMX1 484 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 DERAQ9Y315 318 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 RIPK3Q9Y572 518 aa0.58□□□□□ -2.32
SNORA40-201ENST00000388090 PIGNO95427 931 aa0.57□□□□□ -2.32
SNORA40-201ENST00000388090 PPIAP62937 165 aaKnown RBP0.57□□□□□ -2.32
SNORA40-201ENST00000388090 CUL4BQ13620 913 aa0.57□□□□□ -2.32
SNORA40-201ENST00000388090 RUNX3Q13761 415 aa0.57□□□□□ -2.32
SNORA40-201ENST00000388090 MTF1Q14872 753 aa0.57□□□□□ -2.32
SNORA40-201ENST00000388090 Q1RN00 199 aa0.57□□□□□ -2.32
SNORA40-201ENST00000388090 CTXN3Q4LDR2 81 aa0.57□□□□□ -2.32
SNORA40-201ENST00000388090 ZNF776Q68DI1 518 aaPredicted RBP0.57□□□□□ -2.32
SNORA40-201ENST00000388090 CORO6Q6QEF8 472 aa0.57□□□□□ -2.32
SNORA40-201ENST00000388090 FRRS1Q6ZNA5 592 aa0.57□□□□□ -2.32
SNORA40-201ENST00000388090 CDHR3Q6ZTQ4 885 aa0.57□□□□□ -2.32
SNORA40-201ENST00000388090 FAM131BQ86XD5 332 aa0.57□□□□□ -2.32
SNORA40-201ENST00000388090 ZFAND4Q86XD8 727 aa0.57□□□□□ -2.32
SNORA40-201ENST00000388090 TPRX1Q8N7U7 411 aa0.57□□□□□ -2.32
SNORA40-201ENST00000388090 NIPA2Q8N8Q9 360 aa0.57□□□□□ -2.32
SNORA40-201ENST00000388090 IGSF8Q969P0 613 aa0.57□□□□□ -2.32
SNORA40-201ENST00000388090 ATXN7L3BQ96GX2 97 aa0.57□□□□□ -2.32
SNORA40-201ENST00000388090 CEP295NLQ96MC4 621 aa0.57□□□□□ -2.32
SNORA40-201ENST00000388090 MYADMQ96S97 322 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms