RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 SIRPGQ9P1W8 387 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 CORO1CQ9ULV4 474 aaPredicted RBP12.42□□□□□ -0.42
SMN1-202ENST00000380707 PSMD13Q9UNM6 376 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 CDYLQ9Y232 598 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 WDR37Q9Y2I8 494 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 MTO1Q9Y2Z2 717 aaKnown RBP12.42□□□□□ -0.42
SMN1-202ENST00000380707 VWA7Q9Y334 891 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 ZFC3H1O60293 1989 aaKnown RBP12.41□□□□□ -0.42
SMN1-202ENST00000380707 TRBV23OR9-2A0A075B6M9 112 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 EXOC1LA0A1B0GW35 172 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 FAM95CA0A1B0GW59 222 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 SLC5A10A0PJK1 596 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 B4DGG1 531 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 POC1B-GALNT4F8VUJ3 575 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 LIN7AO14910 233 aaPredicted RBP12.41□□□□□ -0.42
SMN1-202ENST00000380707 SIGLEC6O43699 453 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 SH3BP5O60239 455 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 GPC4O75487 556 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 SHBGP04278 402 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 GCAP28676 217 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 SPRP35270 261 aaPredicted RBP12.41□□□□□ -0.42
SMN1-202ENST00000380707 HSPA14Q0VDF9 509 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 CLCA4Q14CN2 919 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 MAP9Q49MG5 647 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 C6orf132Q5T0Z8 1188 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 PIM3Q86V86 326 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 VRK3Q8IV63 474 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 NAGSQ8N159 534 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 MREGQ8N565 214 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 SIDT2Q8NBJ9 832 aaKnown RBP12.41□□□□□ -0.42
SMN1-202ENST00000380707 SPDYE1Q8NFV5 336 aaPredicted RBP12.41□□□□□ -0.42
SMN1-202ENST00000380707 GIMAP7Q8NHV1 300 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 SETD7Q8WTS6 366 aaKnown RBP12.41□□□□□ -0.42
SMN1-202ENST00000380707 ZDHHC1Q8WTX9 485 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 ASZ1Q8WWH4 475 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 SLC44A1Q8WWI5 657 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 PATE1Q8WXA2 126 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 ELMO2Q96JJ3 720 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 CAMK1GQ96NX5 476 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 PAFAH2Q99487 392 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 GPR21Q99679 349 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 OLFM1Q99784 485 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 DUSP23Q9BVJ7 150 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 OR52A5Q9H2C5 316 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 PCOLCE2Q9UKZ9 415 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 ACSL5Q9ULC5 683 aa12.41□□□□□ -0.42
SMN1-202ENST00000380707 ARHGEF17Q96PE2 2063 aaPredicted RBP12.41□□□□□ -0.42
SMN1-202ENST00000380707 WDFY3Q8IZQ1 3526 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 HMX2A2RU54 273 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 CCDC151A5D8V7 595 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 PDZK1P1A8MUH7 402 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 KPNA5O15131 536 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 FLRT2O43155 660 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 NOBOXO60393 691 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 VPS26AO75436 327 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 ITGA2BP08514 1039 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 ALPPL2P10696 532 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 MYF5P13349 255 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 F3P13726 295 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 SAT1P21673 171 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 FDXRP22570 491 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 MSH2P43246 934 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 GRK6P43250 576 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 LIMK1P53667 647 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 LIMK2P53671 638 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 SYTL3Q4VX76 610 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 AGAP9Q5VTM2 703 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 ZCCHC8Q6NZY4 707 aaKnown RBP12.4□□□□□ -0.42
SMN1-202ENST00000380707 IYDQ6PHW0 289 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 OGFOD3Q6PK18 319 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 ABRAXAS1Q6UWZ7 409 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 WASH2PQ6VEQ5 465 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 NAXDQ8IW45 347 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 ZBTB2Q8N680 514 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 CD200R1Q8TD46 325 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 RHBDD1Q8TEB9 315 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 DCAKDQ8WVC6 231 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 TMEM159Q96B96 161 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 FAM122AQ96E09 287 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 GPR22Q99680 433 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 DHRS4Q9BTZ2 278 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 WWP1Q9H0M0 922 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 CAB39LQ9H9S4 337 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 WASH6PQ9NQA3 447 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 TAS2R13Q9NYV9 303 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 SLC39A10Q9ULF5 831 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 DHRS7Q9Y394 339 aa12.4□□□□□ -0.42
SMN1-202ENST00000380707 LY6G6EA0A0G2JKS1 128 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 OR52A4PA6NMU1 304 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 CBFA2T3O75081 653 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 SLCO2B1O94956 709 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 APOA4P06727 396 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 INHBAP08476 426 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 CD9P21926 228 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 PLA2G5P39877 138 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 SKIV2L2P42285 1042 aaKnown RBP12.39□□□□□ -0.43
SMN1-202ENST00000380707 TAS2R39P59534 338 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 RPA4Q13156 261 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 BMPR2Q13873 1038 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 GBX1Q14549 363 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms