RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 TMEM25Q86YD3 366 aa12.42□□□□□ -0.42
VPS16-202ENST00000380445 PLPP6Q8IY26 295 aa12.42□□□□□ -0.42
VPS16-202ENST00000380445 MRPL43Q8N983 215 aaKnown RBP12.42□□□□□ -0.42
VPS16-202ENST00000380445 FNDC5Q8NAU1 212 aa12.42□□□□□ -0.42
VPS16-202ENST00000380445 LEMD2Q8NC56 503 aa12.42□□□□□ -0.42
VPS16-202ENST00000380445 GPR26Q8NDV2 337 aa12.42□□□□□ -0.42
VPS16-202ENST00000380445 ZUFSPQ96AP4 578 aa12.42□□□□□ -0.42
VPS16-202ENST00000380445 TRIM54Q9BYV2 358 aa12.42□□□□□ -0.42
VPS16-202ENST00000380445 FAM192AQ9GZU8 254 aa12.42□□□□□ -0.42
VPS16-202ENST00000380445 IPPKQ9H8X2 491 aa12.42□□□□□ -0.42
VPS16-202ENST00000380445 ASB1Q9Y576 335 aa12.42□□□□□ -0.42
VPS16-202ENST00000380445 ANKRD12Q6UB98 2062 aa12.42□□□□□ -0.42
VPS16-202ENST00000380445 NEDD8-MDP1E9PL57 170 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 NPPAP01160 153 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 CAPN1P07384 714 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 NFKBIAP25963 317 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 HMOX2P30519 316 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 SLC7A1P30825 629 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 CCR2P41597 374 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 LETMD1Q6P1Q0 360 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 TTC23LQ6PF05 361 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 IL27RAQ6UWB1 636 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 MILR1Q7Z6M3 343 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 IRF7Q92985 503 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 LRRC58Q96CX6 371 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 DCUN1D1Q96GG9 259 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 ACOX2Q99424 681 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 OPTCQ9UBM4 332 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 ZMYM5Q9UJ78 669 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 LEF1Q9UJU2 399 aaPredicted RBP12.41□□□□□ -0.42
VPS16-202ENST00000380445 CNOT11Q9UKZ1 510 aaKnown RBP12.41□□□□□ -0.42
VPS16-202ENST00000380445 RAB26Q9ULW5 256 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 CCL26Q9Y258 94 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 SCN8AQ9UQD0 1980 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 HELZP42694 1942 aaKnown RBP12.41□□□□□ -0.42
VPS16-202ENST00000380445 TCRBV3S1A0A5B6 114 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 CCDC154A6NI56 674 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 PFDN1O60925 122 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 GUCA1CO95843 209 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 CAPNS1P04632 268 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 OR56A5P0C7T3 313 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 HSD17B1P14061 328 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 PIK3CGP48736 1102 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 ERVFC1P60507 584 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 PTSQ03393 145 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 CDKL4Q5MAI5 379 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 DPY19L3Q6ZPD9 716 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 OR4F6Q8NGB9 312 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 LKAAEAR1Q8TD35 194 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 APOL5Q9BWW9 433 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 CD244Q9BZW8 370 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 MUC13Q9H3R2 512 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 NSUN3Q9H649 340 aaKnown RBP12.41□□□□□ -0.42
VPS16-202ENST00000380445 SPHK2Q9NRA0 654 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 HCFC1R1Q9NWW0 138 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 WWOXQ9NZC7 414 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 TSR3Q9UJK0 312 aaKnown RBP12.41□□□□□ -0.42
VPS16-202ENST00000380445 FAM234BA2RU67 622 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 GRXCR2A6NFK2 248 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 OR7A17O14581 309 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 RNASEH1O60930 286 aaKnown RBP12.41□□□□□ -0.42
VPS16-202ENST00000380445 UGT2B4P06133 528 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 ZCCHC18P0CG32 403 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 POLR2JP52435 117 aaKnown RBP12.41□□□□□ -0.42
VPS16-202ENST00000380445 LBX1P52954 281 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 FOLH1Q04609 750 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 EMX2Q04743 252 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 PRKG2Q13237 762 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 PPIGQ13427 754 aaKnown RBP eCLIP12.41□□□□□ -0.421e-6■■■□□ 18.6
VPS16-202ENST00000380445 TEAD2Q15562 447 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 IL23RQ5VWK5 629 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 PLPP4Q5VZY2 271 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 ARL10Q8N8L6 244 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 GOLM1Q8NBJ4 401 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 OR2T11Q8NH01 316 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 UBTD2Q8WUN7 234 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 OTUB2Q96DC9 234 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 CDK15Q96Q40 435 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 PKP2Q99959 881 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 SLC39A3Q9BRY0 314 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 BRD9Q9H8M2 597 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 IL1RL2Q9HB29 575 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 PKD2L2Q9NZM6 624 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 ST14Q9Y5Y6 855 aa12.41□□□□□ -0.42
VPS16-202ENST00000380445 IFRD1O00458 451 aaPredicted RBP12.4□□□□□ -0.42
VPS16-202ENST00000380445 NRG2O14511 850 aaPredicted RBP12.4□□□□□ -0.42
VPS16-202ENST00000380445 TXNDC9O14530 226 aa12.4□□□□□ -0.42
VPS16-202ENST00000380445 EEDO75530 441 aaKnown RBP12.4□□□□□ -0.42
VPS16-202ENST00000380445 ZNF30P17039 623 aa12.4□□□□□ -0.42
VPS16-202ENST00000380445 CA5AP35218 305 aa12.4□□□□□ -0.42
VPS16-202ENST00000380445 NNMTP40261 264 aa12.4□□□□□ -0.42
VPS16-202ENST00000380445 HSPA7P48741 367 aa12.4□□□□□ -0.42
VPS16-202ENST00000380445 NFYCQ13952 458 aa12.4□□□□□ -0.42
VPS16-202ENST00000380445 ARHGEF7Q14155 803 aa12.4□□□□□ -0.42
VPS16-202ENST00000380445 C6orf10Q5SRN2 563 aa12.4□□□□□ -0.42
VPS16-202ENST00000380445 FBXO46Q6PJ61 603 aaPredicted RBP12.4□□□□□ -0.42
VPS16-202ENST00000380445 BRAT1Q6PJG6 821 aa12.4□□□□□ -0.42
VPS16-202ENST00000380445 SCIMPQ6UWF3 145 aa12.4□□□□□ -0.42
VPS16-202ENST00000380445 GDPD4Q6W3E5 623 aa12.4□□□□□ -0.42
VPS16-202ENST00000380445 RNF165Q6ZSG1 346 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms