RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 GPALPP1Q8IXQ4 340 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 OR8H3Q8N146 312 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 TMEM199Q8N511 208 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 OR6P1Q8NGX9 317 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 TMCO6Q96DC7 493 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 NODALQ96S42 347 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 SPATA9Q9BWV2 254 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 FAM49AQ9H0Q0 323 aaPredicted RBP7.39□□□□□ -1.23
CDKL5-201ENST00000379989 NIPAL2Q9H841 368 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 SPAG4Q9NPE6 437 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 SRRDQ9UH36 339 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 PFDN2Q9UHV9 154 aa7.39□□□□□ -1.23
CDKL5-201ENST00000379989 PCDHGA9Q9Y5G4 932 aaKnown RBP7.39□□□□□ -1.23
CDKL5-201ENST00000379989 A0A0B4J293 547 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 MANSC4A6NHS7 340 aaPredicted RBP7.38□□□□□ -1.23
CDKL5-201ENST00000379989 GLRA3O75311 464 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 SNAPINO95295 136 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 NPPAP01160 153 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 CALCAP01258 141 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 FTH1P02794 183 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 ACO1P21399 889 aaKnown RBP7.38□□□□□ -1.23
CDKL5-201ENST00000379989 SLC15A1P46059 708 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 CNTN2Q02246 1040 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 PIGHQ14442 188 aaPredicted RBP7.38□□□□□ -1.23
CDKL5-201ENST00000379989 CTU2Q2VPK5 515 aaKnown RBP7.38□□□□□ -1.23
CDKL5-201ENST00000379989 DUSP28Q4G0W2 176 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 PITRM1Q5JRX3 1037 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 ALG1LQ6GMV1 187 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 ARHGAP36Q6ZRI8 547 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 HTR3DQ70Z44 454 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 JAZF1Q86VZ6 243 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 ADGRG3Q86Y34 549 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 RNF31Q96EP0 1072 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 SGTBQ96EQ0 304 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 DCSTAMPQ9H295 470 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 SLC6A15Q9H2J7 730 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 SPNS1Q9H2V7 528 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 ZCCHC4Q9H5U6 513 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 RC3H2Q9HBD1 1191 aaKnown RBP7.38□□□□□ -1.23
CDKL5-201ENST00000379989 CACNA2D2Q9NY47 1150 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 ELF5Q9UKW6 265 aaPredicted RBP7.38□□□□□ -1.23
CDKL5-201ENST00000379989 hCG_1818297A0A087WSY0 165 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 CCDC182A6NF36 153 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 ADM5C9JUS6 153 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 BTN3A3O00478 584 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 LRCH4O75427 683 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 ECDO95905 644 aaPredicted RBP7.38□□□□□ -1.23
CDKL5-201ENST00000379989 C1QBP02746 253 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 ALDOAP04075 364 aaKnown RBP7.38□□□□□ -1.23
CDKL5-201ENST00000379989 KRT1P04264 644 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 CCNYL3P0C7X3 344 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 SRCP12931 536 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 CPB1P15086 417 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 ITGB6P18564 788 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 IL1R2P27930 398 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 GMPRP36959 345 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 ARHGAP1Q07960 439 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 EPS8Q12929 822 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 IKZF1Q13422 519 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 KCNC3Q14003 757 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 AAK1Q2M2I8 961 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 CES5AQ6NT32 575 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 RANBP10Q6VN20 620 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 SPOCD1Q6ZMY3 1216 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 TIFABQ6ZNK6 161 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 RNF180Q86T96 592 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 METTL23Q86XA0 190 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 RCOR2Q8IZ40 523 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 UTP15Q8TED0 518 aaKnown RBP7.38□□□□□ -1.23
CDKL5-201ENST00000379989 FUBP1Q96AE4 644 aaKnown RBP7.38□□□□□ -1.23
CDKL5-201ENST00000379989 ADPGKQ9BRR6 497 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 CCDC90BQ9GZT6 254 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 MMP28Q9H239 520 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 RPF1Q9H9Y2 349 aaKnown RBP7.38□□□□□ -1.23
CDKL5-201ENST00000379989 POPDC2Q9HBU9 364 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 LTB4R2Q9NPC1 389 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 HPF1Q9NWY4 346 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 BFARQ9NZS9 450 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 TRPM7Q96QT4 1865 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 SRCAPQ6ZRS2 3230 aa7.38□□□□□ -1.23
CDKL5-201ENST00000379989 CCDC78A2IDD5 438 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 PTGES3LE9PB15 166 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 EEF2KO00418 725 aaKnown RBP7.37□□□□□ -1.23
CDKL5-201ENST00000379989 C22orf31O95567 290 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 HDCP19113 662 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 MPSTP25325 297 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 FLI1Q01543 452 aaPredicted RBP7.37□□□□□ -1.23
CDKL5-201ENST00000379989 TRAF3Q13114 568 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 POU4F3Q15319 338 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 DENND5AQ6IQ26 1287 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 TRMT10BQ6PF06 316 aaKnown RBP7.37□□□□□ -1.23
CDKL5-201ENST00000379989 TFAP2EQ6VUC0 442 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 ARMCX2Q7L311 632 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 ZDHHC17Q8IUH5 632 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 SPPL2CQ8IUH8 684 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 GOT1L1Q8NHS2 421 aaPredicted RBP7.37□□□□□ -1.23
CDKL5-201ENST00000379989 MCOLN3Q8TDD5 553 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 DNAJA4Q8WW22 397 aaPredicted RBP7.37□□□□□ -1.23
CDKL5-201ENST00000379989 SOCS4Q8WXH5 440 aa7.37□□□□□ -1.23
CDKL5-201ENST00000379989 BCO2Q9BYV7 579 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms