RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 CCDC177Q9NQR7 707 aaPredicted RBP10.66□□□□□ -0.7
NEDD9-201ENST00000379433 TDP1Q9NUW8 608 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 GMPR2Q9P2T1 348 aaKnown RBP10.66□□□□□ -0.7
NEDD9-201ENST00000379433 MALT1Q9UDY8 824 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 PPM1HQ9ULR3 514 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 ARHGAP26Q9UNA1 814 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 PIP5K1BO14986 540 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 PAPSS2O95340 614 aaPredicted RBP10.66□□□□□ -0.7
NEDD9-201ENST00000379433 ITGAXP20702 1163 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 RECQLP46063 649 aaPredicted RBP10.66□□□□□ -0.7
NEDD9-201ENST00000379433 PRKAA2P54646 552 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 IL2P60568 153 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 TNK2Q07912 1038 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 ANKRD39Q53RE8 183 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 LRRC66Q68CR7 880 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 TUBA3EQ6PEY2 450 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 CCDC149Q6ZUS6 474 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.66□□□□□ -0.7
NEDD9-201ENST00000379433 LKAAEAR1Q8TD35 194 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 PPP2R3CQ969Q6 453 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 TRMT2BQ96GJ1 504 aaKnown RBP10.66□□□□□ -0.7
NEDD9-201ENST00000379433 CLK4Q9HAZ1 481 aaKnown RBP10.66□□□□□ -0.7
NEDD9-201ENST00000379433 IL23AQ9NPF7 189 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 ZNHIT2Q9UHR6 403 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 V9GYQ6 96 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 OR2AG2A6NM03 316 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 WASH3PC4AMC7 463 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 NR5A2O00482 541 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 PSMG1O95456 288 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 EPOP01588 193 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 GSTT2P0CG29 244 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 GSTT2BP0CG30 244 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 COL6A2P12110 1019 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 FUT11Q495W5 492 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 MPPE1Q53F39 396 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 UNC50Q53HI1 259 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 CHST9Q7L1S5 443 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 TBC1D21Q8IYX1 336 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 OR52B6Q8NGF0 335 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 OR8H1Q8NGG4 311 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 ITFG1Q8TB96 612 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 LZICQ8WZA0 190 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 PYCR2Q96C36 320 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 BIRC8Q96P09 236 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 EML4Q9HC35 981 aaKnown RBP10.66□□□□□ -0.7
NEDD9-201ENST00000379433 IL26Q9NPH9 171 aa10.66□□□□□ -0.7
NEDD9-201ENST00000379433 FARSBQ9NSD9 589 aaKnown RBP10.66□□□□□ -0.7
NEDD9-201ENST00000379433 A0A088AWK7 358 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 PRR23AA6NEV1 266 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 RFXAPO00287 272 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 KPNA3O00505 521 aaPredicted RBP10.65□□□□□ -0.7
NEDD9-201ENST00000379433 SDHDO14521 159 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 INPP4BO15327 924 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 GREM1O60565 184 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 CCNT2O60583 730 aaKnown RBP10.65□□□□□ -0.7
NEDD9-201ENST00000379433 SMNDC1O75940 238 aaKnown RBP eCLIP10.65□□□□□ -0.7
NEDD9-201ENST00000379433 PGLSO95336 258 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 IGSF6O95976 241 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 TMEM11P17152 192 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 FDXRP22570 491 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 XPAP23025 273 aaPredicted RBP10.65□□□□□ -0.7
NEDD9-201ENST00000379433 PPARGP37231 505 aaPredicted RBP10.65□□□□□ -0.7
NEDD9-201ENST00000379433 C21orf58P58505 322 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 PLOD1Q02809 727 aaPredicted RBP10.65□□□□□ -0.7
NEDD9-201ENST00000379433 ARHGEF7Q14155 803 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 GRB7Q14451 532 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 CTSL3PQ5NE16 218 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 ZNF678Q5SXM1 525 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 CRTC1Q6UUV9 634 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 PRR23CQ6ZRP0 262 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 GPSM1Q86YR5 675 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 TMC8Q8IU68 726 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 DCAF4L2Q8NA75 395 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 STAG3L4Q8TBR4 150 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 OVCA2Q8WZ82 227 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 HGH1Q9BTY7 390 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 EBF3Q9H4W6 596 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 TMEM5Q9Y2B1 443 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 MED16Q9Y2X0 877 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 NOTCH4Q99466 2003 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 CHD5Q8TDI0 1954 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 TXNDC9O14530 226 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 TM7SF2O76062 418 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 CDK14O94921 469 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 SRCP12931 536 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 AOC1P19801 751 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 SERPINA4P29622 427 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 WASP42768 502 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 HSPA7P48741 367 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 TTPAP49638 278 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 MRPS22P82650 360 aaKnown RBP10.65□□□□□ -0.7
NEDD9-201ENST00000379433 FASTKQ14296 549 aaKnown RBP10.65□□□□□ -0.7
NEDD9-201ENST00000379433 SFTPA1Q8IWL2 248 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 DSELQ8IZU8 1212 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 LMNTD1Q8N9Z9 388 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 OR2AP1Q8NGE2 309 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 RANBP9Q96S59 729 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 WRAP53Q9BUR4 548 aaKnown RBP10.65□□□□□ -0.7
NEDD9-201ENST00000379433 PCDHAC1Q9H158 963 aa10.65□□□□□ -0.7
NEDD9-201ENST00000379433 GSTO2Q9H4Y5 243 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms