RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 CENPIQ92674 756 aaPredicted RBP13.01□□□□□ -0.33
NPHP4-203ENST00000378169 C1orf74Q96LT6 269 aa13.01□□□□□ -0.33
NPHP4-203ENST00000378169 PSKH2Q96QS6 385 aa13.01□□□□□ -0.33
NPHP4-203ENST00000378169 OR2AG1Q9H205 316 aa13.01□□□□□ -0.33
NPHP4-203ENST00000378169 RASSF1Q9NS23 344 aa13.01□□□□□ -0.33
NPHP4-203ENST00000378169 ASB3Q9Y575 518 aa13.01□□□□□ -0.33
NPHP4-203ENST00000378169 SNTNA6NMZ2 147 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 G3V2T6 193 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 SUV39H1O43463 412 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 AGTR2P50052 363 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 NEK2P51955 445 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 C2orf80Q0P641 193 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 C1DQ13901 141 aaKnown RBP13□□□□□ -0.33
NPHP4-203ENST00000378169 NCF4Q15080 339 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 ZCCHC7Q8N3Z6 543 aaKnown RBP13□□□□□ -0.33
NPHP4-203ENST00000378169 ZNF540Q8NDQ6 660 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 VPS35Q96QK1 796 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 MCMBPQ9BTE3 642 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 EPS8L2Q9H6S3 715 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 C1orf109Q9NX04 203 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 MTMR10Q9NXD2 777 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 VPS4AQ9UN37 437 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 ACTL7AQ9Y615 435 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 AURKAO14965 403 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 DLGAP3O95886 979 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 SOD2P04179 222 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 HTR1BP28222 390 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 CD68P34810 354 aaPredicted RBP13□□□□□ -0.33
NPHP4-203ENST00000378169 ST13P50502 369 aaKnown RBP13□□□□□ -0.33
NPHP4-203ENST00000378169 ELP6Q0PNE2 266 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 EPS8Q12929 822 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 LY6G5CQ5SRR4 150 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 TRIM40Q6P9F5 258 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 B3GNT6Q6ZMB0 384 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 OR4A15Q8NGL6 344 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 SLC13A3Q8WWT9 602 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 SKA1Q96BD8 255 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 RIOK2Q9BVS4 552 aaKnown RBP13□□□□□ -0.33
NPHP4-203ENST00000378169 COQ10BQ9H8M1 238 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 CLK4Q9HAZ1 481 aaKnown RBP13□□□□□ -0.33
NPHP4-203ENST00000378169 TDP1Q9NUW8 608 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 SRCAPQ6ZRS2 3230 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 ABHD14A-ACY1A0A1B0GW23 586 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 YAP1P46937 504 aaKnown RBP13□□□□□ -0.33
NPHP4-203ENST00000378169 STK19P49842 368 aaPredicted RBP13□□□□□ -0.33
NPHP4-203ENST00000378169 SCD5Q86SK9 330 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 PROSER1Q86XN7 944 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 XAGE5Q8WWM1 108 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 NSUN5Q96P11 429 aaKnown RBP13□□□□□ -0.33
NPHP4-203ENST00000378169 AASDHPPTQ9NRN7 309 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 RAPGEFL1Q9UHV5 662 aa13□□□□□ -0.33
NPHP4-203ENST00000378169 LRRC14BA6NHZ5 514 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 K7ERQ8 282 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 SAP18O00422 153 aaKnown RBP12.99□□□□□ -0.33
NPHP4-203ENST00000378169 FPGTO14772 594 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 KDELR3O43731 214 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 DEFA1P59665 94 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 DEFA3P59666 94 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 RPS14P62263 151 aaKnown RBP12.99□□□□□ -0.33
NPHP4-203ENST00000378169 ERVK-8P63133 956 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 GPAT3Q53EU6 434 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 LRRC66Q68CR7 880 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 GRASPQ7Z6J2 395 aaPredicted RBP12.99□□□□□ -0.33
NPHP4-203ENST00000378169 TCAIMQ8N3R3 496 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 TMEM174Q8WUU8 243 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 USP7Q93009 1102 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 MIR1-1HGQ9H1L0 117 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 PHPT1Q9NRX4 125 aaPredicted RBP12.99□□□□□ -0.33
NPHP4-203ENST00000378169 SLC22A14Q9Y267 594 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 ITM2BQ9Y287 266 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 ZNF840PA6NDX5 716 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 CACNB4O00305 520 aaPredicted RBP12.99□□□□□ -0.33
NPHP4-203ENST00000378169 GUCY1B2O75343 617 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 EPOP01588 193 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 AMD1P17707 334 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 KRT20P35900 424 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 CCR4P51679 360 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 SPIBQ01892 262 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 BLMHQ13867 455 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 GPR33Q49SQ1 333 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 C2orf27AQ580R0 203 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 CLLU1OSQ5K130 101 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 CCNYL2Q5T2Q4 361 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 GDPD4Q6W3E5 623 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 OR52J3Q8NH60 311 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 IL12RB2Q99665 862 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 FAIM2Q9BWQ8 316 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 TMEM245Q9H330 911 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 HCSTQ9UBK5 93 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 INSL6Q9Y581 213 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 A0A0U1RQS6 177 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 OAZ2O95190 189 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 ATAT1Q5SQI0 421 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 BROXQ5VW32 411 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.99□□□□□ -0.33
NPHP4-203ENST00000378169 Q6ZVL8 140 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 VN1R5Q7Z5H4 357 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 GATAD2AQ86YP4 633 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 SVOPQ8N4V2 548 aa12.99□□□□□ -0.33
NPHP4-203ENST00000378169 RTP4Q96DX8 246 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms