RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 NAPRTQ6XQN6 538 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 GK5Q6ZS86 529 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 CCDC117Q8IWD4 279 aaPredicted RBP11.63□□□□□ -0.55
NPHP4-202ENST00000378161 ZNF781Q8N8C0 355 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 KCT2Q8NC54 265 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 DOK1Q99704 481 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 HDHD5Q9BXW7 423 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 TMEM39BQ9GZU3 492 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 PRDM5Q9NQX1 630 aaPredicted RBP11.63□□□□□ -0.55
NPHP4-202ENST00000378161 COG5Q9UP83 839 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 DRG1Q9Y295 367 aaKnown RBP11.63□□□□□ -0.55
NPHP4-202ENST00000378161 ARHGAP33O14559 1287 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 MYL12BO14950 172 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 PTP4A3O75365 173 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 MYL12AP19105 171 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 KCNC1P48547 511 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 HCAR3P49019 387 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 ITGA1P56199 1179 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 MS4A2Q01362 244 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 GAD2Q05329 585 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 AANATQ16613 207 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 UAP1L1Q3KQV9 507 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 PIGGQ5H8A4 983 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 ATF7IP2Q5U623 682 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 ZNF782Q6ZMW2 699 aaPredicted RBP11.63□□□□□ -0.55
NPHP4-202ENST00000378161 CCDC116Q8IYX3 515 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 FAM162AQ96A26 154 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 TTLL2Q9BWV7 592 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 MGAT4AQ9UM21 535 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 NOD1Q9Y239 953 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 GMPPBQ9Y5P6 360 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 MYH2Q9UKX2 1941 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 CHURC1-FNTBB4DL54 471 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 DISC1C4P0D8 188 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 LIASO43766 372 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 PRMT3O60678 531 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 PPP1R11O60927 126 aaPredicted RBP11.63□□□□□ -0.55
NPHP4-202ENST00000378161 ADAM11O75078 769 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 FTH1P02794 183 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 BMP2P12643 396 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 PDK2Q15119 407 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 LRRC38Q5VT99 294 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 SSX6Q7RTT6 188 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 AKR7LQ8NHP1 331 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 TSNAXQ99598 290 aaKnown RBP11.63□□□□□ -0.55
NPHP4-202ENST00000378161 SOX17Q9H6I2 414 aaPredicted RBP11.63□□□□□ -0.55
NPHP4-202ENST00000378161 RNF121Q9H920 327 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 EXD2Q9NVH0 621 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 INTS10Q9NVR2 710 aaKnown RBP11.63□□□□□ -0.55
NPHP4-202ENST00000378161 SIRPGQ9P1W8 387 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 POFUT2Q9Y2G5 429 aa11.63□□□□□ -0.55
NPHP4-202ENST00000378161 KHDRBS3O75525 346 aaKnown RBP11.62□□□□□ -0.55
NPHP4-202ENST00000378161 FGF18O76093 207 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 TMEM132DQ14C87 1099 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 RTP2Q5QGT7 225 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 C6orf141Q5SZD1 244 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 TMEM81Q6P7N7 255 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 RNF111Q6ZNA4 994 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 GDPD3Q7L5L3 318 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 OXR1Q8N573 874 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 TP53I13Q8NBR0 393 aaPredicted RBP11.62□□□□□ -0.55
NPHP4-202ENST00000378161 ITFG1Q8TB96 612 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 ATG4CQ96DT6 458 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 EGLN2Q96KS0 407 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 WDR18Q9BV38 432 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 TMEM181Q9P2C4 612 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 NFKBIL1Q9UBC1 381 aaPredicted RBP11.62□□□□□ -0.55
NPHP4-202ENST00000378161 ABCD2Q9UBJ2 740 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 RAP2CQ9Y3L5 183 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 FABP12A6NFH5 140 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 IFNA4P05014 189 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 PRKAR2AP13861 404 aaKnown RBP11.62□□□□□ -0.55
NPHP4-202ENST00000378161 ADORA2BP29275 332 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 BRCC3P46736 316 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 CLCNKBP51801 687 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 GRIK2Q13002 908 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 DAG1Q14118 895 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 FRG1Q14331 258 aaKnown RBP11.62□□□□□ -0.55
NPHP4-202ENST00000378161 GRM7Q14831 915 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 IL31Q6EBC2 164 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 GPALPP1Q8IXQ4 340 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 TMEM102Q8N9M5 508 aaPredicted RBP11.62□□□□□ -0.55
NPHP4-202ENST00000378161 FAM83FQ8NEG4 500 aaPredicted RBP11.62□□□□□ -0.55
NPHP4-202ENST00000378161 OR6S1Q8NH40 331 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 FCGR1BQ92637 280 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 MARVELD3Q96A59 401 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 SPATA33Q96N06 139 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 DPYSL5Q9BPU6 564 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 TRIM62Q9BVG3 475 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 UGT2B28Q9BY64 529 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 MMP28Q9H239 520 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 SSR3Q9UNL2 185 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 CNTNAP2Q9UHC6 1331 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 C19orf81C9J6K1 198 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 OIP5O43482 229 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 TRIM3O75382 744 aaPredicted RBP11.62□□□□□ -0.55
NPHP4-202ENST00000378161 TADA2AO75478 443 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 STAU1O95793 577 aaKnown RBP11.62□□□□□ -0.55
NPHP4-202ENST00000378161 RAB4BP61018 213 aa11.62□□□□□ -0.55
NPHP4-202ENST00000378161 PIGFQ07326 219 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms