RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 A0A0D9SEW6 157 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 DRGXA6NNA5 263 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 PTGES3LE9PB15 166 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 INMTO95050 263 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 CDH1P12830 882 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 OGNP20774 298 aaKnown RBP16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 HTR1EP28566 365 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 OR4D2P58180 307 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 UFM1P61960 85 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 CRY1Q16526 586 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 DPY19L1Q2PZI1 675 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 PARP15Q460N3 678 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 ZCCHC7Q8N3Z6 543 aaKnown RBP16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 CHDHQ8NE62 594 aaPredicted RBP16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 TSPEARQ8WU66 669 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 SMIM14Q96QK8 99 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 ACOX2Q99424 681 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 HGH1Q9BTY7 390 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 FAM118AQ9NWS6 357 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 TAS2R13Q9NYV9 303 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 POU2F3Q9UKI9 436 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 PRG3Q9Y2Y8 225 aaPredicted RBP16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 PCDHB3Q9Y5E6 796 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 TYW5A2RUC4 315 aaKnown RBP16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 CCDC154A6NI56 674 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 M0R3G1 203 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 TBC1D4O60343 1298 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 PRAMEF11O60813 436 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 SERPINF2P08697 491 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 CDKN1CP49918 316 aaPredicted RBP16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 CAMK2BQ13554 666 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 TRIP4Q15650 581 aaPredicted RBP16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 UGT3A1Q6NUS8 523 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 ZDHHC13Q8IUH4 622 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 DCBLD1Q8N8Z6 715 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 OR7A2PQ8NGA2 310 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 PEX13Q92968 403 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 FBXO32Q969P5 355 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 GPR21Q99679 349 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 DERL2Q9GZP9 239 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 CCDC90BQ9GZT6 254 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 ZNF225Q9UK10 706 aa16.37■□□□□ 0.21
PCDHA1-201ENST00000378133 EPOP01588 193 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 TPTEP56180 551 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 SELENBP1Q13228 472 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 RCAN2Q14206 197 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 TYSND1Q2T9J0 566 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 PLEKHG7Q6ZR37 379 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 SYVN1Q86TM6 617 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 ZNF555Q8NEP9 628 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 OR4K2Q8NGD2 314 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 FUBP1Q96AE4 644 aaKnown RBP16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 C8orf48Q96LL4 319 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 ZNF599Q96NL3 588 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 CYP2S1Q96SQ9 504 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 CGREF1Q99674 301 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 EHD1Q9H4M9 534 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 INTS7Q9NVH2 962 aaKnown RBP16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 ERVK-11Q9UQG0 969 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 ATP11BQ9Y2G3 1177 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 LCHNA4D1U4 455 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 NPEPPSL1A6NEC2 478 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 G3V2T6 193 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 NDUFS2O75306 463 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 EEDO75530 441 aaKnown RBP16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 OAZ2O95190 189 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 EIF2S1P05198 315 aaKnown RBP16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 AGXTP21549 392 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 RCVRNP35243 200 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 MTHFRP42898 656 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 OR1G1P47890 313 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 RAD51Q06609 339 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 RALGPS2Q86X27 583 aaPredicted RBP16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 SDCCAG3Q96C92 435 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 NSMCE3Q96MG7 304 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 CTRCQ99895 268 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 SMURF2Q9HAU4 748 aa16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 LEF1Q9UJU2 399 aaPredicted RBP16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 ABT1Q9ULW3 272 aaKnown RBP16.36■□□□□ 0.21
PCDHA1-201ENST00000378133 BTN3A1O00481 513 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 VPS4BO75351 444 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 NDUFS3O75489 264 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 NADKO95544 446 aaPredicted RBP16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 C1RP00736 705 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 ZFP36L2P47974 494 aaKnown RBP16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 GP2P55259 537 aaKnown RBP16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 ARPP19P56211 112 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 GABARAPL2P60520 117 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 TAF10Q12962 218 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 NFE2Q16621 373 aaPredicted RBP16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 NADSYN1Q6IA69 706 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 TMEM199Q8N511 208 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 RMDN1Q96DB5 314 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 EXOC2Q96KP1 924 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 B3GALT6Q96L58 329 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 NODALQ96S42 347 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 RMND5AQ9H871 391 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 SIAEQ9HAT2 523 aa16.35■□□□□ 0.21
PCDHA1-201ENST00000378133 KLQ9UEF7 1012 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms