RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 DRGXA6NNA5 263 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 TNFRSF10BO14763 440 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 CA3P07451 260 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 GNAZP19086 355 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 NFATC2Q13469 925 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 TMEM26Q6ZUK4 368 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 LPGAT1Q92604 370 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 ZFYVE19Q96K21 471 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 AIF1LQ9BQI0 150 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 ERAL1O75616 437 aaKnown RBP14.29□□□□□ -0.12
TCOF1-202ENST00000377797 GABBR2O75899 941 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 SF1Q15637 639 aaKnown RBP14.29□□□□□ -0.12
TCOF1-202ENST00000377797 REP15Q6BDI9 236 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 PSAPL1Q6NUJ1 521 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 ZCCHC8Q6NZY4 707 aaKnown RBP14.29□□□□□ -0.12
TCOF1-202ENST00000377797 CCDC81Q6ZN84 652 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 AMZ2Q86W34 360 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 AADATQ8N5Z0 425 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 FAM156AQ8NDB6 213 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 OR2T12Q8NG77 320 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 THAP11Q96EK4 314 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 MOCOSQ96EN8 888 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 NSUN3Q9H649 340 aaKnown RBP14.29□□□□□ -0.12
TCOF1-202ENST00000377797 TMEM30AQ9NV96 361 aa14.29□□□□□ -0.12
TCOF1-202ENST00000377797 MATN2O00339 956 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 HS6ST1O60243 411 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 MMP20O60882 483 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 EPCAMP16422 314 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 VIPR2P41587 438 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 GDF5P43026 501 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 CSTF3Q12996 717 aaKnown RBP14.28□□□□□ -0.12
TCOF1-202ENST00000377797 ATAD3BQ5T9A4 648 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 CYP4Z1Q86W10 505 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 RALGPS2Q86X27 583 aaPredicted RBP14.28□□□□□ -0.12
TCOF1-202ENST00000377797 PQLC1Q8N2U9 271 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 AKTIPQ9H8T0 292 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 A0A088AWK7 358 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 GSAPA4D1B5 854 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 ZNF10P21506 573 aaPredicted RBP14.28□□□□□ -0.12
TCOF1-202ENST00000377797 KDELC1Q6UW63 502 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 PATL1Q86TB9 770 aaKnown RBP14.28□□□□□ -0.12
TCOF1-202ENST00000377797 PHTF2Q8N3S3 785 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 MAGEE2Q8TD90 523 aaPredicted RBP14.28□□□□□ -0.12
TCOF1-202ENST00000377797 TUBGCP5Q96RT8 1024 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 MGME1Q9BQP7 344 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 FAIM2Q9BWQ8 316 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 RAD21L1Q9H4I0 556 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 C6orf203Q9P0P8 240 aaPredicted RBP14.28□□□□□ -0.12
TCOF1-202ENST00000377797 NTSP30990 170 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 TGFBIQ15582 683 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 CPTPQ5TA50 214 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 CHSY3Q70JA7 882 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 R3HCC1LQ7Z5L2 792 aaKnown RBP14.28□□□□□ -0.12
TCOF1-202ENST00000377797 FIBINQ8TAL6 211 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 CEP19Q96LK0 163 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 KLF16Q9BXK1 252 aaPredicted RBP14.28□□□□□ -0.12
TCOF1-202ENST00000377797 RB1P06400 928 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 GRSF1Q12849 480 aaKnown RBP eCLIP14.28□□□□□ -0.12
TCOF1-202ENST00000377797 SPIDRQ14159 915 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 INTS11Q5TA45 600 aaKnown RBP14.28□□□□□ -0.12
TCOF1-202ENST00000377797 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.28□□□□□ -0.122e-7■■■■■ 102.3
TCOF1-202ENST00000377797 PPCDCQ96CD2 204 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 SAMD11Q96NU1 681 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 MTERF1Q99551 399 aaKnown RBP14.28□□□□□ -0.12
TCOF1-202ENST00000377797 OLFM1Q99784 485 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 S100A14Q9HCY8 104 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 C1orf109Q9NX04 203 aa14.28□□□□□ -0.12
TCOF1-202ENST00000377797 COPG1Q9Y678 874 aaKnown RBP14.28□□□□□ -0.12
TCOF1-202ENST00000377797 MGRN1O60291 552 aa14.27□□□□□ -0.12
TCOF1-202ENST00000377797 HMGCLP35914 325 aa14.27□□□□□ -0.12
TCOF1-202ENST00000377797 SSR2P43308 183 aa14.27□□□□□ -0.12
TCOF1-202ENST00000377797 CCR3P51677 355 aa14.27□□□□□ -0.12
TCOF1-202ENST00000377797 HMGCS1Q01581 520 aa14.27□□□□□ -0.12
TCOF1-202ENST00000377797 IRGCQ6NXR0 463 aa14.27□□□□□ -0.12
TCOF1-202ENST00000377797 MED27Q6P2C8 311 aa14.27□□□□□ -0.12
TCOF1-202ENST00000377797 EPGNQ6UW88 154 aa14.27□□□□□ -0.12
TCOF1-202ENST00000377797 KLHL28Q9NXS3 571 aa14.27□□□□□ -0.12
TCOF1-202ENST00000377797 ANXA4P09525 319 aaPredicted RBP14.27□□□□□ -0.13
TCOF1-202ENST00000377797 NCEH1Q6PIU2 408 aa14.27□□□□□ -0.13
TCOF1-202ENST00000377797 ZNF438Q7Z4V0 828 aa14.27□□□□□ -0.13
TCOF1-202ENST00000377797 ADHFE1Q8IWW8 467 aa14.27□□□□□ -0.13
TCOF1-202ENST00000377797 LINC00597Q9H2U6 94 aa14.27□□□□□ -0.13
TCOF1-202ENST00000377797 OGDHLQ9ULD0 1010 aa14.27□□□□□ -0.13
TCOF1-202ENST00000377797 PCDHGA11Q9Y5H2 935 aa14.27□□□□□ -0.13
TCOF1-202ENST00000377797 AURKAO14965 403 aa14.27□□□□□ -0.13
TCOF1-202ENST00000377797 INPP1P49441 399 aa14.27□□□□□ -0.13
TCOF1-202ENST00000377797 IL5RAQ01344 420 aa14.27□□□□□ -0.13
TCOF1-202ENST00000377797 ALDH6A1Q02252 535 aaKnown RBP14.27□□□□□ -0.13
TCOF1-202ENST00000377797 TECRLQ5HYJ1 363 aa14.27□□□□□ -0.13
TCOF1-202ENST00000377797 POMPQ9Y244 141 aa14.27□□□□□ -0.13
TCOF1-202ENST00000377797 DHCR24Q15392 516 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 ARMC3Q5W041 872 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 PDE12Q6L8Q7 609 aaKnown RBP14.26□□□□□ -0.13
TCOF1-202ENST00000377797 ZNF513Q8N8E2 541 aaPredicted RBP14.26□□□□□ -0.13
TCOF1-202ENST00000377797 DACH2Q96NX9 599 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 SLC7A8Q9UHI5 535 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 DHRS7Q9Y394 339 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 SPO11Q9Y5K1 396 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 ZW10O43264 779 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 PEX1O43933 1283 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms