RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 CLCNKBP51801 687 aa16.27■□□□□ 0.2
TRIM39-201ENST00000376656 NPTX1Q15818 432 aa16.27■□□□□ 0.2
TRIM39-201ENST00000376656 GPRIN3Q6ZVF9 776 aa16.27■□□□□ 0.2
TRIM39-201ENST00000376656 EFL1Q7Z2Z2 1120 aaKnown RBP16.27■□□□□ 0.2
TRIM39-201ENST00000376656 DCP2Q8IU60 420 aaKnown RBP16.27■□□□□ 0.2
TRIM39-201ENST00000376656 PGBD5Q8N414 524 aa16.27■□□□□ 0.2
TRIM39-201ENST00000376656 OR52B6Q8NGF0 335 aa16.27■□□□□ 0.2
TRIM39-201ENST00000376656 TBCDQ9BTW9 1192 aa16.27■□□□□ 0.2
TRIM39-201ENST00000376656 MROH8Q9H579 483 aa16.27■□□□□ 0.2
TRIM39-201ENST00000376656 ABCB10Q9NRK6 738 aa16.27■□□□□ 0.2
TRIM39-201ENST00000376656 CDH9Q9ULB4 789 aa16.27■□□□□ 0.2
TRIM39-201ENST00000376656 PNMA8BQ9ULN7 279 aaPredicted RBP16.27■□□□□ 0.2
TRIM39-201ENST00000376656 TMEM98Q9Y2Y6 226 aa16.27■□□□□ 0.2
TRIM39-201ENST00000376656 BTN3A1O00481 513 aa16.27■□□□□ 0.2
TRIM39-201ENST00000376656 LSM1O15116 133 aaKnown RBP16.27■□□□□ 0.2
TRIM39-201ENST00000376656 NDST3O95803 873 aa16.27■□□□□ 0.2
TRIM39-201ENST00000376656 MASP1P48740 699 aa16.27■□□□□ 0.2
TRIM39-201ENST00000376656 DALRD3Q5D0E6 543 aaKnown RBP16.27■□□□□ 0.2
TRIM39-201ENST00000376656 THOC7Q6I9Y2 204 aaKnown RBP16.27■□□□□ 0.2
TRIM39-201ENST00000376656 CYP20A1Q6UW02 462 aa16.27■□□□□ 0.2
TRIM39-201ENST00000376656 CYP2U1Q7Z449 544 aa16.27■□□□□ 0.2
TRIM39-201ENST00000376656 NANOGNBQ7Z5D8 188 aa16.27■□□□□ 0.2
TRIM39-201ENST00000376656 ZNF548Q8NEK5 533 aaPredicted RBP16.27■□□□□ 0.2
TRIM39-201ENST00000376656 RHBDF1Q96CC6 855 aa16.27■□□□□ 0.2
TRIM39-201ENST00000376656 BCL7BQ9BQE9 202 aa16.27■□□□□ 0.2
TRIM39-201ENST00000376656 SLIRPQ9GZT3 109 aaKnown RBP16.27■□□□□ 0.2
TRIM39-201ENST00000376656 ADM5C9JUS6 153 aa16.27■□□□□ 0.19
TRIM39-201ENST00000376656 ARNTLO00327 626 aa16.27■□□□□ 0.19
TRIM39-201ENST00000376656 RYKP34925 604 aa16.27■□□□□ 0.19
TRIM39-201ENST00000376656 ACVR1Q04771 509 aa16.27■□□□□ 0.19
TRIM39-201ENST00000376656 VARS2Q5ST30 1063 aaKnown RBP16.27■□□□□ 0.19
TRIM39-201ENST00000376656 B3GNT8Q7Z7M8 397 aa16.27■□□□□ 0.19
TRIM39-201ENST00000376656 GALNT5Q7Z7M9 940 aa16.27■□□□□ 0.19
TRIM39-201ENST00000376656 GPR150Q8NGU9 434 aa16.27■□□□□ 0.19
TRIM39-201ENST00000376656 OR4L1Q8NH43 312 aa16.27■□□□□ 0.19
TRIM39-201ENST00000376656 ARRDC2Q8TBH0 407 aa16.27■□□□□ 0.19
TRIM39-201ENST00000376656 PSMG2Q969U7 264 aa16.27■□□□□ 0.19
TRIM39-201ENST00000376656 CCDC115Q96NT0 180 aa16.27■□□□□ 0.19
TRIM39-201ENST00000376656 DACH2Q96NX9 599 aa16.27■□□□□ 0.19
TRIM39-201ENST00000376656 THUMPD3Q9BV44 507 aaKnown RBP16.27■□□□□ 0.19
TRIM39-201ENST00000376656 TRIT1Q9H3H1 467 aaKnown RBP16.27■□□□□ 0.19
TRIM39-201ENST00000376656 VTA1Q9NP79 307 aa16.27■□□□□ 0.19
TRIM39-201ENST00000376656 TMLHEQ9NVH6 421 aa16.27■□□□□ 0.19
TRIM39-201ENST00000376656 COL4A4P53420 1690 aaPredicted RBP16.26■□□□□ 0.19
TRIM39-201ENST00000376656 FAM47E-STBD1D6RA91 191 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 SMPD1P17405 629 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 HK3P52790 923 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 STC1P52823 247 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 GALNT3Q14435 633 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 FAM162AQ96A26 154 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 DSN1Q9H410 356 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 SYTL2Q9HCH5 934 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 POLR3HQ9Y535 204 aaPredicted RBP16.26■□□□□ 0.19
TRIM39-201ENST00000376656 NOX1Q9Y5S8 564 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 GRXCR2A6NFK2 248 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 FZD9O00144 591 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 RPP40O75818 363 aaKnown RBP16.26■□□□□ 0.19
TRIM39-201ENST00000376656 MLYCDO95822 493 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 HOXB8P17481 243 aaPredicted RBP16.26■□□□□ 0.19
TRIM39-201ENST00000376656 ARL1P40616 181 aaPredicted RBP16.26■□□□□ 0.19
TRIM39-201ENST00000376656 EIF2DP41214 584 aaKnown RBP16.26■□□□□ 0.19
TRIM39-201ENST00000376656 NR4A2P43354 598 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 ALDH7A1P49419 539 aaKnown RBP16.26■□□□□ 0.19
TRIM39-201ENST00000376656 PPP5CP53041 499 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 ERVPABLB-1P60509 514 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 IFITM2Q01629 132 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 RAD51Q06609 339 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 PRR23BQ6ZRT6 265 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 EID3Q8N140 333 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 TMEM86AQ8N2M4 240 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 OR56A4Q8NGH8 313 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 OR5K1Q8NHB7 308 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 RHOXF1Q8NHV9 184 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 FBLIM1Q8WUP2 373 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 ZNF566Q969W8 418 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 TSPAN18Q96SJ8 248 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 GPR21Q99679 349 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 RTP3Q9BQQ7 232 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 ASPSCR1Q9BZE9 553 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 HEBP1Q9NRV9 189 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 TTC3P53804 2025 aa16.26■□□□□ 0.19
TRIM39-201ENST00000376656 LOC285095A0A1B0GVY8 99 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 LCHNA4D1U4 455 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 RRN3P2A6NIE6 340 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 SLC16A6O15403 523 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 KATNA1O75449 491 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 CYP11A1P05108 521 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 SMIM10L2AP0DMW4 78 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 SMIM10L2BP0DMW5 78 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 CYP4B1P13584 511 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 HTR7P34969 479 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 CLCA4Q14CN2 919 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 TRIP4Q15650 581 aaPredicted RBP16.25■□□□□ 0.19
TRIM39-201ENST00000376656 TWF2Q6IBS0 349 aaKnown RBP16.25■□□□□ 0.19
TRIM39-201ENST00000376656 DNAJC14Q6Y2X3 702 aaPredicted RBP16.25■□□□□ 0.19
TRIM39-201ENST00000376656 ARL10Q8N8L6 244 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 ATP6V0D2Q8N8Y2 350 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 OR8J3Q8NGG0 315 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 OR10Q1Q8NGQ4 319 aa16.25■□□□□ 0.19
TRIM39-201ENST00000376656 C17orf50Q8WW18 174 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms