RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 SKIDA1Q1XH10 827 aa14.41□□□□□ -0.1
HDAC6-204ENST00000376643 D2HGDHQ8N465 521 aa14.41□□□□□ -0.1
HDAC6-204ENST00000376643 HM13Q8TCT9 377 aa14.41□□□□□ -0.1
HDAC6-204ENST00000376643 FICDQ9BVA6 458 aa14.41□□□□□ -0.1
HDAC6-204ENST00000376643 UGT1A7Q9HAW7 530 aa14.41□□□□□ -0.1
HDAC6-204ENST00000376643 UGT1A10Q9HAW8 530 aa14.41□□□□□ -0.1
HDAC6-204ENST00000376643 UGT1A8Q9HAW9 530 aa14.41□□□□□ -0.1
HDAC6-204ENST00000376643 PSMD13Q9UNM6 376 aa14.41□□□□□ -0.1
HDAC6-204ENST00000376643 IGHV5-51A0A0C4DH38 117 aa14.4□□□□□ -0.1
HDAC6-204ENST00000376643 C17orf113A0A1B0GUU1 675 aa14.4□□□□□ -0.1
HDAC6-204ENST00000376643 MACROD2A1Z1Q3 448 aa14.4□□□□□ -0.1
HDAC6-204ENST00000376643 CCDC66A2RUB6 948 aa14.4□□□□□ -0.1
HDAC6-204ENST00000376643 IFRD1O00458 451 aaPredicted RBP14.4□□□□□ -0.1
HDAC6-204ENST00000376643 TJP3O95049 919 aa14.4□□□□□ -0.1
HDAC6-204ENST00000376643 PTPN7P35236 360 aa14.4□□□□□ -0.1
HDAC6-204ENST00000376643 TBX2Q13207 712 aaPredicted RBP14.4□□□□□ -0.1
HDAC6-204ENST00000376643 UGT8Q16880 541 aa14.4□□□□□ -0.1
HDAC6-204ENST00000376643 GPR33Q49SQ1 333 aa14.4□□□□□ -0.1
HDAC6-204ENST00000376643 TMEM126BQ8IUX1 230 aa14.4□□□□□ -0.1
HDAC6-204ENST00000376643 TXLNBQ8N3L3 684 aa14.4□□□□□ -0.1
HDAC6-204ENST00000376643 ACVR1CQ8NER5 493 aa14.4□□□□□ -0.1
HDAC6-204ENST00000376643 OR4K2Q8NGD2 314 aa14.4□□□□□ -0.1
HDAC6-204ENST00000376643 GPR150Q8NGU9 434 aa14.4□□□□□ -0.1
HDAC6-204ENST00000376643 CT55Q8WUE5 264 aa14.4□□□□□ -0.1
HDAC6-204ENST00000376643 CPT1BQ92523 772 aa14.4□□□□□ -0.1
HDAC6-204ENST00000376643 LRFN5Q96NI6 719 aa14.4□□□□□ -0.1
HDAC6-204ENST00000376643 COPS8Q99627 209 aa14.4□□□□□ -0.1
HDAC6-204ENST00000376643 MAP3K3Q99759 626 aa14.4□□□□□ -0.1
HDAC6-204ENST00000376643 TRIM5Q9C035 493 aa14.4□□□□□ -0.1
HDAC6-204ENST00000376643 WWP1Q9H0M0 922 aa14.4□□□□□ -0.1
HDAC6-204ENST00000376643 ACTL8Q9H568 366 aa14.4□□□□□ -0.1
HDAC6-204ENST00000376643 KCND1Q9NSA2 647 aa14.4□□□□□ -0.1
HDAC6-204ENST00000376643 SOHLH2Q9NX45 425 aa14.4□□□□□ -0.1
HDAC6-204ENST00000376643 SLC24A2Q9UI40 661 aa14.4□□□□□ -0.1
HDAC6-204ENST00000376643 PCDHA13Q9Y5I0 950 aa14.4□□□□□ -0.1
HDAC6-204ENST00000376643 MRPS18BQ9Y676 258 aaKnown RBP14.4□□□□□ -0.1
HDAC6-204ENST00000376643 ARL5AQ9Y689 179 aa14.4□□□□□ -0.1
HDAC6-204ENST00000376643 GOLGA6L9A6NEM1 432 aa14.39□□□□□ -0.11
HDAC6-204ENST00000376643 F8W8V4 182 aa14.39□□□□□ -0.11
HDAC6-204ENST00000376643 GAPDHSO14556 408 aaPredicted RBP14.39□□□□□ -0.11
HDAC6-204ENST00000376643 SCRG1O75711 98 aa14.39□□□□□ -0.11
HDAC6-204ENST00000376643 PTMAP06454 111 aaKnown RBP14.39□□□□□ -0.11
HDAC6-204ENST00000376643 FOLR1P15328 257 aa14.39□□□□□ -0.11
HDAC6-204ENST00000376643 F8A1P23610 371 aa14.39□□□□□ -0.11
HDAC6-204ENST00000376643 RBL1P28749 1068 aa14.39□□□□□ -0.11
HDAC6-204ENST00000376643 PTPN4P29074 926 aa14.39□□□□□ -0.11
HDAC6-204ENST00000376643 CTNNA1P35221 906 aaKnown RBP14.39□□□□□ -0.11
HDAC6-204ENST00000376643 PRLHRP49683 370 aa14.39□□□□□ -0.11
HDAC6-204ENST00000376643 NAP1L1P55209 391 aaKnown RBP14.39□□□□□ -0.11
HDAC6-204ENST00000376643 ADCY2Q08462 1091 aa14.39□□□□□ -0.11
HDAC6-204ENST00000376643 LLGL1Q15334 1064 aa14.39□□□□□ -0.11
HDAC6-204ENST00000376643 PWWP2BQ6NUJ5 590 aa14.39□□□□□ -0.11
HDAC6-204ENST00000376643 SARM1Q6SZW1 724 aa14.39□□□□□ -0.11
HDAC6-204ENST00000376643 RANBP10Q6VN20 620 aa14.39□□□□□ -0.11
HDAC6-204ENST00000376643 ASB18Q6ZVZ8 466 aa14.39□□□□□ -0.11
HDAC6-204ENST00000376643 DET1Q7L5Y6 550 aa14.39□□□□□ -0.11
HDAC6-204ENST00000376643 SNX20Q7Z614 316 aa14.39□□□□□ -0.11
HDAC6-204ENST00000376643 HPS6Q86YV9 775 aa14.39□□□□□ -0.11
HDAC6-204ENST00000376643 TTC13Q8NBP0 860 aa14.39□□□□□ -0.11
HDAC6-204ENST00000376643 C1GALT1Q9NS00 363 aa14.39□□□□□ -0.11
HDAC6-204ENST00000376643 BTRCQ9Y297 605 aa14.39□□□□□ -0.11
HDAC6-204ENST00000376643 TP53TG5Q9Y2B4 290 aa14.39□□□□□ -0.11
HDAC6-204ENST00000376643 ZNF106Q9H2Y7 1883 aaKnown RBP14.38□□□□□ -0.11
HDAC6-204ENST00000376643 AGAP14A8MT82 685 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 F5H423 210 aaPredicted RBP14.38□□□□□ -0.11
HDAC6-204ENST00000376643 QSOX1O00391 747 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 PJA2O43164 708 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 BUD23O43709 281 aaKnown RBP14.38□□□□□ -0.11
HDAC6-204ENST00000376643 KDM1AO60341 852 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 AGTP01019 485 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 NTRK1P04629 796 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 MSL3P1P0C860 447 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 EBLN1P0CF75 366 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 RBP3P10745 1247 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 ATP1B2P14415 290 aaPredicted RBP14.38□□□□□ -0.11
HDAC6-204ENST00000376643 CDH3P22223 829 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 CD151P48509 253 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 RWDD2BP57060 319 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 EIF3EP60228 445 aaKnown RBP14.38□□□□□ -0.11
HDAC6-204ENST00000376643 RPA4Q13156 261 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 SEMA5AQ13591 1074 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 UBAP2LQ14157 1087 aaKnown RBP14.38□□□□□ -0.11
HDAC6-204ENST00000376643 COLEC12Q5KU26 742 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 ANKRD20A2Q5SQ80 823 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 ATP1A1-AS1Q5TC04 95 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 ANKRD20A1Q5TYW2 823 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 ANKRD20A3Q5VUR7 823 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 IZUMO3Q5VZ72 239 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 DARS2Q6PI48 645 aaKnown RBP14.38□□□□□ -0.11
HDAC6-204ENST00000376643 FAM83HQ6ZRV2 1179 aaPredicted RBP14.38□□□□□ -0.11
HDAC6-204ENST00000376643 NXPE1Q8N323 547 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 RNF214Q8ND24 703 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 ACTL9Q8TC94 416 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 SPATA13Q96N96 652 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 ALS2CR12Q96Q35 445 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 INSM2Q96T92 566 aaPredicted RBP14.38□□□□□ -0.11
HDAC6-204ENST00000376643 C17orf62Q9BQA9 187 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 HEMGNQ9BXL5 484 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 OSBPL8Q9BZF1 889 aa14.38□□□□□ -0.11
HDAC6-204ENST00000376643 SLC7A5P2Q9GIP4 190 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms