RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	PNPT1	Q8TCS8	783 aa	Known RBP	13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	MIEF1	Q9NQG6	463 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	THEG	Q9P2T0	379 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	PLEKHM1	Q9Y4G2	1056 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	PRSS21	Q9Y6M0	314 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	TRPM6	Q9BX84	2022 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	TGFB1	P01137	390 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	IGLV3-25	P01717	112 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	ESR1	P03372	595 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	BPGM	P07738	259 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	MYF5	P13349	255 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	POLR2C	P19387	275 aa	Predicted RBP	13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	PGM1	P36871	562 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	SLC9A5	Q14940	896 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	ZNF572	Q7Z3I7	529 aa	Predicted RBP	13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	CUZD1	Q86UP6	607 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	CPXM2	Q8N436	756 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	EBF4	Q9BQW3	602 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	CAAP1	Q9H8G2	361 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	IL17C	Q9P0M4	197 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	SERGEF	Q9UGK8	458 aa		13.32	□□□□□ -0.28
DDR1-225	ENST00000376568	FAM159B	A6NKW6	160 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	ECI2	O75521	394 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	KRT6A	P02538	564 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	KRT6B	P04259	564 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	CAPN1	P07384	714 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	LHCGR	P22888	699 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	PDHA2	P29803	388 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	P2RY2	P41231	377 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	KRT6C	P48668	564 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	ANKRD46	Q86W74	232 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	ARHGAP24	Q8N264	748 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	PIWIL2	Q8TC59	973 aa	Known RBP	13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	CKAP2	Q8WWK9	683 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	INPP5D	Q92835	1189 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	ZNF419	Q96HQ0	510 aa	Predicted RBP	13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	RSRC1	Q96IZ7	334 aa	Known RBP	13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	FAR2	Q96K12	515 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	TAC3	Q9UHF0	121 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568		A0A087X1B8	175 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	ZNF860	A6NHJ4	632 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	RHPN2P1	A8MT19	583 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	OR1F1	O43749	312 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	MAGEC1	O60732	1142 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	MOSPD3	O75425	235 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	IPO13	O94829	963 aa	Known RBP	13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	S1PR4	O95977	384 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	THEGL	P0DJG4	465 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	DDX5	P17844	614 aa	Known RBP	13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	TNNI3	P19429	210 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	ATP6AP1L	Q52LC2	224 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	TCHHL1	Q5QJ38	904 aa	Predicted RBP	13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	RBCK1	Q9BYM8	510 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	TRPC4	Q9UBN4	977 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	GMFG	O60234	142 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	CACNG3	O60359	315 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	JUND	P17535	347 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	KEL	P23276	732 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	RPL14	P50914	215 aa	Known RBP	13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	SEMA3A	Q14563	771 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	DEFB133	Q30KQ1	61 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	ISLR2	Q6UXK2	745 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	KYAT3	Q6YP21	454 aa	Known RBP	13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	GPRIN3	Q6ZVF9	776 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	SNX32	Q86XE0	403 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	PLA2G15	Q8NCC3	412 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	ZFR	Q96KR1	1074 aa	Known RBP	13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	OSBPL1A	Q9BXW6	950 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	RIC8B	Q9NVN3	520 aa		13.31	□□□□□ -0.28
DDR1-225	ENST00000376568	CAPN8	A6NHC0	703 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568		H3BMM5	538 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	PPP6C	O00743	305 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	LILRB3	O75022	631 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	KCNK10	P57789	538 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	PTCHD3	Q3KNS1	767 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	ZNF534	Q76KX8	674 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	LRRTM4	Q86VH4	590 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	OR2T3	Q8NH03	318 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	ZNF641	Q96N77	438 aa	Predicted RBP	13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	SLC2A11	Q9BYW1	496 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	SRMS	Q9H3Y6	488 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	SMOC1	Q9H4F8	434 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	PRDM8	Q9NQV8	689 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	TDRD6	O60522	2096 aa	Known RBP	13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	POM121B	A6NF01	834 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	DLX3	O60479	287 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	KLHL2	O95198	593 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	GRK2	P25098	689 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	GRAMD1B	Q3KR37	738 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	MINDY4	Q4G0A6	757 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	TMEM135	Q86UB9	458 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	SLC22A9	Q8IVM8	553 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	OR13J1	Q8NGT2	312 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	CDH19	Q9H159	772 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	CLEC1B	Q9P126	229 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	PADI4	Q9UM07	663 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	CCDC22	O60826	627 aa		13.3	□□□□□ -0.28
DDR1-225	ENST00000376568	TMEM196	Q5HYL7	178 aa		13.3	□□□□□ -0.28

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