RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 PAQR9Q6ZVX9 377 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 VN1R5Q7Z5H4 357 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 GATAD2AQ86YP4 633 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 LIX1Q8N485 282 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 GLMNQ92990 594 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 GTF2A1LQ9UNN4 478 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 COPG1Q9Y678 874 aaKnown RBP17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 IL4RP24394 825 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 C16orf62Q7Z3J2 963 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 TMEM25Q86YD3 366 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 CDK20Q8IZL9 346 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 HOPXQ9BPY8 73 aaPredicted RBP17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 FBXL12Q9NXK8 326 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 PRDM4Q9UKN5 801 aa17.7■□□□□ 0.42
PTPDC1-202ENST00000375360 LRRC72A6NJI9 287 aa17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 E7ESA3 106 aa17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 FAM20BO75063 409 aa17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 RGS1Q08116 209 aa17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 DGCR6Q14129 220 aa17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 APCDD1Q8J025 514 aa17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 PQLC1Q8N2U9 271 aa17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 NUS1Q96E22 293 aa17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 SPHK2Q9NRA0 654 aa17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 MARCH4Q9P2E8 410 aaPredicted RBP17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 MYRFQ9Y2G1 1151 aa17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 CAPN8A6NHC0 703 aa17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 CNOT3O75175 753 aaKnown RBP17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 LEFTY1O75610 366 aa17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 IGFBP6P24592 240 aaPredicted RBP17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 NEK2P51955 445 aa17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 MED27Q6P2C8 311 aa17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 R3HCC1LQ7Z5L2 792 aaKnown RBP17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 OR4A15Q8NGL6 344 aa17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 PPM1HQ9ULR3 514 aa17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 VPS4AQ9UN37 437 aa17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 COQ6Q9Y2Z9 468 aa17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 SAMHD1Q9Y3Z3 626 aaKnown RBP17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 CA3P07451 260 aa17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 SLC6A2P23975 617 aa17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 LDLRAP1Q5SW96 308 aa17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 TYW3Q6IPR3 259 aaKnown RBP17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 CMTR2Q8IYT2 770 aaKnown RBP17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 CENPIQ92674 756 aaPredicted RBP17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 PHF24Q9UPV7 400 aa17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 SH3GLB1Q9Y371 365 aa17.69■□□□□ 0.42
PTPDC1-202ENST00000375360 LINC00854A0A1B0GVQ3 168 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 UPK3BL1B0FP48 263 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 UPK3BL2E5RIL1 263 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 TYROBPO43914 113 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 POP7O75817 140 aaKnown RBP17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 CASP9P55211 416 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 LIPEQ05469 1076 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 GPRC6AQ5T6X5 926 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 OR9I1Q8NGQ6 314 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 ZFP28Q8NHY6 868 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 CARS2Q9HA77 564 aaKnown RBP17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 HCFC1R1Q9NWW0 138 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 OR10H1Q9Y4A9 318 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 NCK1P16333 377 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 BNIP2Q12982 314 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 DYNC1I2Q13409 638 aaKnown RBP17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 RAB33AQ14088 237 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 CASP12Q6UXS9 341 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 REXO5Q96IC2 774 aaKnown RBP17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 SLC39A3Q9BRY0 314 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 DGCR6LQ9BY27 220 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 RAD21L1Q9H4I0 556 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 ELOVL2Q9NXB9 296 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 KLHL20Q9Y2M5 609 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 TNFAIP8O95379 198 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 PAK4O96013 591 aaPredicted RBP17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 C8GP07360 202 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 UMPSP11172 480 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 IMPDH2P12268 514 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 BMPR1AP36894 532 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 CAPZA2P47755 286 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 TNK2Q07912 1038 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 TRIM40Q6P9F5 258 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 FAM129CQ86XR2 697 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 RELL1Q8IUW5 271 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 BPIFB6Q8NFQ5 453 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 KCNA7Q96RP8 456 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 KXD1Q9BQD3 176 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 TRIT1Q9H3H1 467 aaKnown RBP17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 TMEM98Q9Y2Y6 226 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 NDUFB5O43674 189 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 TRPC1P48995 793 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 SCN7AQ01118 1682 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 KIAA0319Q5VV43 1072 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 ENPP7Q6UWV6 458 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 OFCC1Q8IZS5 231 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 PGAM4Q8N0Y7 254 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 PHTF2Q8N3S3 785 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 TMCO5AQ8N6Q1 288 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 IL12RB2Q99665 862 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 OSBPL6Q9BZF3 934 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 LINC00597Q9H2U6 94 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 MTG2Q9H4K7 406 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 WDR26Q9H7D7 661 aa17.68■□□□□ 0.42
PTPDC1-202ENST00000375360 AKTIPQ9H8T0 292 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms