RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 MDM4O15151 490 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 DLX3O60479 287 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 AP2S1P53680 142 aaPredicted RBP11.99□□□□□ -0.49
C9orf3-203ENST00000375315 NCS1P62166 190 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 DEFB103AP81534 67 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 GALNT3Q14435 633 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 ANO4Q32M45 955 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 YIF1BQ5BJH7 314 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 VARS2Q5ST30 1063 aaKnown RBP11.99□□□□□ -0.49
C9orf3-203ENST00000375315 LYPD8Q6UX82 237 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 UBQLNLQ8IYU4 475 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 MINDY1Q8N5J2 469 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 PSD4Q8NDX1 1056 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 FAM83FQ8NEG4 500 aaPredicted RBP11.99□□□□□ -0.49
C9orf3-203ENST00000375315 OR9I1Q8NGQ6 314 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 FAR1Q8WVX9 515 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 ZNF669Q96BR6 464 aaPredicted RBP11.99□□□□□ -0.49
C9orf3-203ENST00000375315 ZHX1-C8orf76Q96EF9 292 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 ZNF300Q96RE9 604 aaPredicted RBP11.99□□□□□ -0.49
C9orf3-203ENST00000375315 REXO4Q9GZR2 422 aaKnown RBP11.99□□□□□ -0.49
C9orf3-203ENST00000375315 TMEM161AQ9NX61 479 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 OGDHLQ9ULD0 1010 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 TEX51A0A1B0GUA7 166 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 ANGPT2O15123 496 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 SHOXO15266 292 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 IL4RP24394 825 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 ABCG1P45844 678 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 ZNF45Q02386 682 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 TRAF3Q13114 568 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 ZNF404Q494X3 552 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 INTS6LQ5JSJ4 861 aaKnown RBP11.99□□□□□ -0.49
C9orf3-203ENST00000375315 ZNF438Q7Z4V0 828 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 UBE2Q1Q7Z7E8 422 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 GLRX5Q86SX6 157 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 SYTL1Q8IYJ3 562 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 DPF3Q92784 378 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 MIR1-1HGQ9H1L0 117 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 EPS8L2Q9H6S3 715 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 MEAF6Q9HAF1 191 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 EIF2B3Q9NR50 452 aaKnown RBP11.99□□□□□ -0.49
C9orf3-203ENST00000375315 PLSCR3Q9NRY6 295 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 CDH9Q9ULB4 789 aa11.99□□□□□ -0.49
C9orf3-203ENST00000375315 AXIN1O15169 862 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 MTHFD1P11586 935 aaKnown RBP11.98□□□□□ -0.49
C9orf3-203ENST00000375315 GTF2E2P29084 291 aaKnown RBP11.98□□□□□ -0.49
C9orf3-203ENST00000375315 CD68P34810 354 aaPredicted RBP11.98□□□□□ -0.49
C9orf3-203ENST00000375315 ST13P50502 369 aaKnown RBP11.98□□□□□ -0.49
C9orf3-203ENST00000375315 ATP4BP51164 291 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 EMX1Q04741 257 aaPredicted RBP11.98□□□□□ -0.49
C9orf3-203ENST00000375315 RAD51Q06609 339 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 RTP2Q5QGT7 225 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 SPATC1Q76KD6 591 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 STK32CQ86UX6 486 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 GALNT6Q8NCL4 622 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 YIPF6Q96EC8 236 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 SLC39A13Q96H72 371 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 VPS39Q96JC1 886 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 SEPHS2Q99611 448 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 SLC30A3Q99726 388 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 TTYH2Q9BSA4 534 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 GON7Q9BXV9 100 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 TOR3AQ9H497 397 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 SEPT10Q9P0V9 454 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 A0A0A0MRY4 1105 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 CCDC154A6NI56 674 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 SLC1A7O00341 560 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 NR5A2O00482 541 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 TBX18O95935 607 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 EOMESO95936 686 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 MT-ND1P03886 318 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 SBK3P0C264 359 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 GOT1P17174 413 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 SAT1P21673 171 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 C1QTNF8P60827 252 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 FPGSQ05932 587 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 TARDBPQ13148 414 aaKnown RBP eCLIP11.98□□□□□ -0.49
C9orf3-203ENST00000375315 PPP1R3AQ16821 1122 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 RETREG3Q86VR2 466 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 TP53INP2Q8IXH6 220 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 TMEM86AQ8N2M4 240 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 FSTL5Q8N475 847 aaPredicted RBP11.98□□□□□ -0.49
C9orf3-203ENST00000375315 TMEM151AQ8N4L1 468 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 SMARCD1Q96GM5 515 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 ST6GAL2Q96JF0 529 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 SPATA13Q96N96 652 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 QKIQ96PU8 341 aaKnown RBP eCLIP11.98□□□□□ -0.498e-7■■■■□ 23.3
C9orf3-203ENST00000375315 DTLQ9NZJ0 730 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 OSGIN1Q9UJX0 560 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 GRIP1Q9Y3R0 1128 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 PCDHGB1Q9Y5G3 927 aa11.98□□□□□ -0.49
C9orf3-203ENST00000375315 HPRP00739 348 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 ALPLP05186 524 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 ARNTP27540 789 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 MNX1P50219 401 aaPredicted RBP11.97□□□□□ -0.49
C9orf3-203ENST00000375315 DUSP4Q13115 394 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 KIF19Q2TAC6 998 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 SYCE2Q6PIF2 218 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 RSPO2Q6UXX9 243 aaPredicted RBP11.97□□□□□ -0.49
C9orf3-203ENST00000375315 IFNEQ86WN2 208 aa11.97□□□□□ -0.49
C9orf3-203ENST00000375315 MIB1Q86YT6 1006 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms