RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 PAGE2BQ5JRK9 111 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 MANEALQ5VSG8 457 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 RBM23Q86U06 439 aaKnown RBP10.94□□□□□ -0.66
CCDC40-203ENST00000374877 ABI1Q8IZP0 508 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 PROKR1Q8TCW9 393 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 GLMNQ92990 594 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 AURKBQ96GD4 344 aaPredicted RBP10.94□□□□□ -0.66
CCDC40-203ENST00000374877 ZNF599Q96NL3 588 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 CDK15Q96Q40 435 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 NODALQ96S42 347 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 AMBRA1Q9C0C7 1298 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 GALPQ9UBC7 116 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 ATP11BQ9Y2G3 1177 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 HS3ST4Q9Y661 456 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 HTTP42858 3142 aa10.94□□□□□ -0.66
CCDC40-203ENST00000374877 SYCE1LA8MT33 242 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 BTN3A1O00481 513 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 AXIN1O15169 862 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 NDUFS2O75306 463 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 E2F6O75461 281 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 POMCP01189 267 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 PRR35P0CG20 571 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 PRKACGP22612 351 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 HOXC13P31276 330 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 GALNT3Q14435 633 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 ENPP6Q6UWR7 440 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 PSMG2Q969U7 264 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 MUL1Q969V5 352 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 KIAA1191Q96A73 305 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 CYP2S1Q96SQ9 504 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 PAAF1Q9BRP4 392 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 NOL6Q9H6R4 1146 aaKnown RBP10.93□□□□□ -0.66
CCDC40-203ENST00000374877 CATSPERZQ9NTU4 200 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 TMEM39AQ9NV64 488 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 ITGB1BP2Q9UKP3 347 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 PCDHB7Q9Y5E2 793 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 OR4F21O95013 312 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 NADKO95544 446 aaPredicted RBP10.93□□□□□ -0.66
CCDC40-203ENST00000374877 PEX11BO96011 259 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 IGLV3-25P01717 112 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 CYP11A1P05108 521 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 MMP2P08253 660 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 UROSP10746 265 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 INAQ16352 499 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 C6orf136Q5SQH8 315 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 CNKSR3Q6P9H4 555 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 NPAS4Q8IUM7 802 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 CRIPAKQ8N1N5 446 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 ZCCHC7Q8N3Z6 543 aaKnown RBP10.93□□□□□ -0.66
CCDC40-203ENST00000374877 TTC30BQ8N4P2 665 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 PAWRQ96IZ0 340 aaKnown RBP10.93□□□□□ -0.66
CCDC40-203ENST00000374877 MBOAT4Q96T53 435 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 AARSD1Q9BTE6 412 aaKnown RBP10.93□□□□□ -0.66
CCDC40-203ENST00000374877 BRINP2Q9C0B6 783 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 CARS2Q9HA77 564 aaKnown RBP10.93□□□□□ -0.66
CCDC40-203ENST00000374877 POLE4Q9NR33 117 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 ZNF225Q9UK10 706 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 UTS2RQ9UKP6 389 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 NYNRINQ9P2P1 1898 aaKnown RBP10.93□□□□□ -0.66
CCDC40-203ENST00000374877 KIAA0355O15063 1070 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 XPNPEP2O43895 674 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 JRKO75564 520 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 SOAT2O75908 522 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 GP2P55259 537 aaKnown RBP10.93□□□□□ -0.66
CCDC40-203ENST00000374877 IFITM3Q01628 133 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 GRIK2Q13002 908 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 CTF1Q16619 201 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 AAK1Q2M2I8 961 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 DNAJC14Q6Y2X3 702 aaPredicted RBP10.93□□□□□ -0.66
CCDC40-203ENST00000374877 ADCK1Q86TW2 530 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 ZFAND4Q86XD8 727 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 SCAIQ8N9R8 606 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 HASPINQ8TF76 798 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 CGREF1Q99674 301 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 TBCDQ9BTW9 1192 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 SYTL2Q9HCH5 934 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 CSNK1G1Q9HCP0 422 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 TMLHEQ9NVH6 421 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 ZIM2Q9NZV7 527 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 U3KQV3 271 aa10.93□□□□□ -0.66
CCDC40-203ENST00000374877 M0QZQ0 153 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 SLC1A7O00341 560 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 UGT2B11O75310 529 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 RPS17P08708 135 aaKnown RBP10.92□□□□□ -0.66
CCDC40-203ENST00000374877 ODC1P11926 461 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 RAD51Q06609 339 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 DGCR6Q14129 220 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 LRRC26Q2I0M4 334 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 OR4L1Q8NH43 312 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 NDNFQ8TB73 568 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 SCLYQ96I15 445 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 THUMPD3Q9BV44 507 aaKnown RBP10.92□□□□□ -0.66
CCDC40-203ENST00000374877 MRPL9Q9BYD2 267 aaKnown RBP10.92□□□□□ -0.66
CCDC40-203ENST00000374877 ATP13A3Q9H7F0 1226 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 AKIP1Q9NQ31 210 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 ABCC13Q9NSE7 274 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 TAS2R13Q9NYV9 303 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 EIF2B4Q9UI10 523 aaKnown RBP10.92□□□□□ -0.66
CCDC40-203ENST00000374877 TSR3Q9UJK0 312 aaKnown RBP10.92□□□□□ -0.66
CCDC40-203ENST00000374877 LRFN2Q9ULH4 789 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms