RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 NUDT22Q9BRQ3 303 aa20.53■□□□□ 0.88
MAP1LC3A-202ENST00000374837 CARD6Q9BX69 1037 aa20.53■□□□□ 0.88
MAP1LC3A-202ENST00000374837 FOXP3Q9BZS1 431 aa20.53■□□□□ 0.88
MAP1LC3A-202ENST00000374837 P2RY12Q9H244 342 aa20.53■□□□□ 0.88
MAP1LC3A-202ENST00000374837 OR52A5Q9H2C5 316 aa20.53■□□□□ 0.88
MAP1LC3A-202ENST00000374837 C20orf96Q9NUD7 363 aaPredicted RBP20.53■□□□□ 0.88
MAP1LC3A-202ENST00000374837 WHRNQ9P202 907 aa20.53■□□□□ 0.88
MAP1LC3A-202ENST00000374837 MRFAP1Q9Y605 127 aa20.53■□□□□ 0.88
MAP1LC3A-202ENST00000374837 CFAP20Q9Y6A4 193 aaKnown RBP20.53■□□□□ 0.88
MAP1LC3A-202ENST00000374837 SPEGQ15772 3267 aa20.53■□□□□ 0.88
MAP1LC3A-202ENST00000374837 RP1P56715 2156 aa20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 LILRA5A6NI73 299 aa20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 IQCF5A8MTL0 148 aa20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 F8W8V4 182 aa20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 NDC80O14777 642 aa20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 SLC35G4P0C7Q5 338 aa20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 MTHFD1P11586 935 aaKnown RBP20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 ITGB6P18564 788 aa20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 OGNP20774 298 aaKnown RBP20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 RPS3P23396 243 aaKnown RBP eCLIP20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 ELK3P41970 407 aa20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 PREPP48147 710 aa20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 GPLD1P80108 840 aa20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 ZFP36L1Q07352 338 aaKnown RBP20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 RPA4Q13156 261 aa20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 TUBB2AQ13885 445 aa20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 HIF1AQ16665 826 aa20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 CLPPQ16740 277 aaPredicted RBP20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 LONRF1Q17RB8 773 aa20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 HP1BP3Q5SSJ5 553 aaPredicted RBP20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 NAPRTQ6XQN6 538 aa20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 ZNF574Q6ZN55 896 aaPredicted RBP20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 CENPUQ71F23 418 aa20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 PIM3Q86V86 326 aa20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 RBM12BQ8IXT5 1001 aaKnown RBP20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 UNC5BQ8IZJ1 945 aa20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 KDF1Q8NAX2 398 aaPredicted RBP20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 OR10G6Q8NH81 332 aa20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 KIF18AQ8NI77 898 aa20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 LKAAEAR1Q8TD35 194 aa20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 GRAMD1AQ96CP6 724 aa20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 AHCYL2Q96HN2 611 aaKnown RBP20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 C12orf66Q96MD2 445 aa20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 NAT9Q9BTE0 207 aa20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 TUBB2BQ9BVA1 445 aa20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 IMP3Q9NV31 184 aaKnown RBP20.52■□□□□ 0.88
MAP1LC3A-202ENST00000374837 IGF2RP11717 2491 aa20.51■□□□□ 0.87
MAP1LC3A-202ENST00000374837 UBA6A0AVT1 1052 aaPredicted RBP20.51■□□□□ 0.87
MAP1LC3A-202ENST00000374837 SLC5A10A0PJK1 596 aa20.51■□□□□ 0.87
MAP1LC3A-202ENST00000374837 LIN7AO14910 233 aaPredicted RBP20.51■□□□□ 0.87
MAP1LC3A-202ENST00000374837 TTC4O95801 387 aa20.51■□□□□ 0.87
MAP1LC3A-202ENST00000374837 S1PR4O95977 384 aa20.51■□□□□ 0.87
MAP1LC3A-202ENST00000374837 EPHA4P54764 986 aa20.51■□□□□ 0.87
MAP1LC3A-202ENST00000374837 INHBCP55103 352 aa20.51■□□□□ 0.87
MAP1LC3A-202ENST00000374837 CRYMQ14894 314 aa20.51■□□□□ 0.87
MAP1LC3A-202ENST00000374837 BRD3Q15059 726 aa20.51■□□□□ 0.87
MAP1LC3A-202ENST00000374837 MAP9Q49MG5 647 aa20.51■□□□□ 0.87
MAP1LC3A-202ENST00000374837 PTRHD1Q6GMV3 140 aaKnown RBP20.51■□□□□ 0.87
MAP1LC3A-202ENST00000374837 DUS1LQ6P1R4 473 aaKnown RBP20.51■□□□□ 0.87
MAP1LC3A-202ENST00000374837 ZNF449Q6P9G9 518 aa20.51■□□□□ 0.87
MAP1LC3A-202ENST00000374837 LRRC6Q86X45 466 aa20.51■□□□□ 0.87
MAP1LC3A-202ENST00000374837 CILP2Q8IUL8 1156 aa20.51■□□□□ 0.87
MAP1LC3A-202ENST00000374837 SLITRK4Q8IW52 837 aa20.51■□□□□ 0.87
MAP1LC3A-202ENST00000374837 KRT222Q8N1A0 295 aa20.51■□□□□ 0.87
MAP1LC3A-202ENST00000374837 LPGAT1Q92604 370 aa20.51■□□□□ 0.87
MAP1LC3A-202ENST00000374837 TMEM74Q96NL1 305 aa20.51■□□□□ 0.87
MAP1LC3A-202ENST00000374837 WDR83Q9BRX9 315 aaKnown RBP20.51■□□□□ 0.87
MAP1LC3A-202ENST00000374837 NRSN2Q9GZP1 204 aa20.51■□□□□ 0.87
MAP1LC3A-202ENST00000374837 SEMA6CQ9H3T2 930 aa20.51■□□□□ 0.87
MAP1LC3A-202ENST00000374837 EPB41L5Q9HCM4 733 aa20.51■□□□□ 0.87
MAP1LC3A-202ENST00000374837 GRHL1Q9NZI5 618 aa20.51■□□□□ 0.87
MAP1LC3A-202ENST00000374837 UTP11Q9Y3A2 253 aaKnown RBP20.51■□□□□ 0.87
MAP1LC3A-202ENST00000374837 TEX264Q9Y6I9 313 aa20.51■□□□□ 0.87
MAP1LC3A-202ENST00000374837 PTPRBP23467 1997 aa20.51■□□□□ 0.87
MAP1LC3A-202ENST00000374837 TMX2-CTNND1H3BSU7 103 aa20.5■□□□□ 0.87
MAP1LC3A-202ENST00000374837 PFDN6O15212 129 aa20.5■□□□□ 0.87
MAP1LC3A-202ENST00000374837 F7P08709 466 aaPredicted RBP20.5■□□□□ 0.87
MAP1LC3A-202ENST00000374837 FMO4P31512 558 aa20.5■□□□□ 0.87
MAP1LC3A-202ENST00000374837 CCR7P32248 378 aa20.5■□□□□ 0.87
MAP1LC3A-202ENST00000374837 CSF2RBP32927 897 aa20.5■□□□□ 0.87
MAP1LC3A-202ENST00000374837 MAPK9P45984 424 aa20.5■□□□□ 0.87
MAP1LC3A-202ENST00000374837 PPM1FP49593 454 aaPredicted RBP20.5■□□□□ 0.87
MAP1LC3A-202ENST00000374837 EIF3BP55884 814 aaKnown RBP20.5■□□□□ 0.87
MAP1LC3A-202ENST00000374837 CALCOCO2Q13137 446 aa20.5■□□□□ 0.87
MAP1LC3A-202ENST00000374837 GPR18Q14330 331 aa20.5■□□□□ 0.87
MAP1LC3A-202ENST00000374837 ZNF789Q5FWF6 425 aa20.5■□□□□ 0.87
MAP1LC3A-202ENST00000374837 SPANXN3Q5MJ09 141 aa20.5■□□□□ 0.87
MAP1LC3A-202ENST00000374837 RNF187Q5TA31 235 aaPredicted RBP20.5■□□□□ 0.87
MAP1LC3A-202ENST00000374837 ZNF470Q6ECI4 717 aa20.5■□□□□ 0.87
MAP1LC3A-202ENST00000374837 DENND6AQ8IWF6 608 aa20.5■□□□□ 0.87
MAP1LC3A-202ENST00000374837 LRRC39Q96DD0 335 aa20.5■□□□□ 0.87
MAP1LC3A-202ENST00000374837 BIRC8Q96P09 236 aa20.5■□□□□ 0.87
MAP1LC3A-202ENST00000374837 LRRC1Q9BTT6 524 aa20.5■□□□□ 0.87
MAP1LC3A-202ENST00000374837 PLAC1Q9HBJ0 212 aa20.5■□□□□ 0.87
MAP1LC3A-202ENST00000374837 GNPTGQ9UJJ9 305 aa20.5■□□□□ 0.87
MAP1LC3A-202ENST00000374837 CHMP2BQ9UQN3 213 aa20.5■□□□□ 0.87
MAP1LC3A-202ENST00000374837 ASPMQ8IZT6 3477 aa20.5■□□□□ 0.87
MAP1LC3A-202ENST00000374837 A0A1W2PNU3 283 aaPredicted RBP20.49■□□□□ 0.87
MAP1LC3A-202ENST00000374837 E7ESA3 106 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms