RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 PCYOX1LQ8NBM8 494 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 TOP1MTQ969P6 601 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 UBXN10Q96LJ8 280 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 NDEL1Q9GZM8 345 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 OPTCQ9UBM4 332 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 INTS6Q9UL03 887 aaKnown RBP10.64□□□□□ -0.71
CXCL12-203ENST00000374429 TDRKHQ9Y2W6 561 aaKnown RBP10.64□□□□□ -0.71
CXCL12-203ENST00000374429 AP4B1Q9Y6B7 739 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 SCN5AQ14524 2016 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 CROCCQ5TZA2 2017 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 TARM1B6A8C7 271 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 LOC730098B7Z3J9 87 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 RFXAPO00287 272 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 TBC1D4O60343 1298 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 WDR47O94967 919 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 PENKP01210 267 aaPredicted RBP10.64□□□□□ -0.71
CXCL12-203ENST00000374429 HIST1H2AGP0C0S8 130 aaPredicted RBP10.64□□□□□ -0.71
CXCL12-203ENST00000374429 HIST1H2ADP20671 130 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 ATP6V1B2P21281 511 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 HOXC13P31276 330 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 RGS4P49798 205 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 RAP1GDS1P52306 607 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 ERVPABLB-1P60509 514 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 WDR5P61964 334 aaKnown RBP10.64□□□□□ -0.71
CXCL12-203ENST00000374429 LCP2Q13094 533 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 SIX5Q8N196 739 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 LZICQ8WZA0 190 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 DPF3Q92784 378 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 RNF31Q96EP0 1072 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 HIST1H2AHQ96KK5 128 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 APOLD1Q96LR9 279 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 HIST1H2AJQ99878 128 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 MGME1Q9BQP7 344 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 H2AFJQ9BTM1 129 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 LIN28AQ9H9Z2 209 aaKnown RBP10.64□□□□□ -0.71
CXCL12-203ENST00000374429 B4GALT6Q9UBX8 382 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 SLC22A14Q9Y267 594 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 A0A0G2JN53 185 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 MAN1A2O60476 641 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 FKBP6O75344 327 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 COL6A2P12110 1019 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 RPIAP49247 311 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 EIF4EBP2Q13542 120 aaPredicted RBP10.64□□□□□ -0.71
CXCL12-203ENST00000374429 SYTL3Q4VX76 610 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 C6orf183Q5T699 404 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 C11orf74Q86VG3 221 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 OR56A4Q8NGH8 313 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 RDH11Q8TC12 318 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 CD200R1Q8TD46 325 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 BIRC8Q96P09 236 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 CENPKQ9BS16 269 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 KLF16Q9BXK1 252 aaPredicted RBP10.64□□□□□ -0.71
CXCL12-203ENST00000374429 PCDH12Q9NPG4 1184 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 NLE1Q9NVX2 485 aaPredicted RBP10.64□□□□□ -0.71
CXCL12-203ENST00000374429 STK39Q9UEW8 545 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 ZNF490Q9ULM2 529 aaPredicted RBP10.64□□□□□ -0.71
CXCL12-203ENST00000374429 LRRC42Q9Y546 428 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 GMEB1Q9Y692 573 aa10.64□□□□□ -0.71
CXCL12-203ENST00000374429 MYO1GB0I1T2 1018 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 SLCO1B7G3V0H7 640 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 H3BNC9 293 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 H2AFYO75367 372 aaKnown RBP10.63□□□□□ -0.71
CXCL12-203ENST00000374429 CD160O95971 181 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 FDXRP22570 491 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 ARPC4P59998 168 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 FAM174BQ3ZCQ3 159 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 CYP27C1Q4G0S4 372 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 IER5LQ5T953 404 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 CHST9Q7L1S5 443 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 TRMT11Q7Z4G4 463 aaKnown RBP10.63□□□□□ -0.71
CXCL12-203ENST00000374429 TMEM150AQ86TG1 271 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 OR2T11Q8NH01 316 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 SELENOMQ8WWX9 145 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 EGLN2Q96KS0 407 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 COPS8Q99627 209 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 KCTD14Q9BQ13 255 aaPredicted RBP10.63□□□□□ -0.71
CXCL12-203ENST00000374429 SLC25A23Q9BV35 468 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 OSGEPL1Q9H4B0 414 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 PLAGL1Q9UM63 463 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 IGLV3-10A0A075B6K4 115 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 SYCE1LA8MT33 242 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 BOLA2-SMG1P6H3BVE0 249 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 ADARP55265 1226 aaKnown RBP10.63□□□□□ -0.71
CXCL12-203ENST00000374429 RING1Q06587 406 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 GTF2H2Q13888 395 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 GTF2H3Q13889 308 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 GTF2H2CQ6P1K8 395 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 RD3Q7Z3Z2 195 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 ADCK2Q7Z695 626 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 FUNDC1Q8IVP5 155 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 SYTL1Q8IYJ3 562 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 ENDOVQ8N8Q3 282 aaKnown RBP10.63□□□□□ -0.71
CXCL12-203ENST00000374429 PTCD2Q8WV60 388 aaKnown RBP10.63□□□□□ -0.71
CXCL12-203ENST00000374429 SLC29A1Q99808 456 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 TSEN34Q9BSV6 310 aaKnown RBP10.63□□□□□ -0.71
CXCL12-203ENST00000374429 CCDC90BQ9GZT6 254 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 ELOVL6Q9H5J4 265 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 BRD9Q9H8M2 597 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 LTB4R2Q9NPC1 389 aa10.63□□□□□ -0.71
CXCL12-203ENST00000374429 SYNDIG1LA6NDD5 238 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms