RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 MAGP20916 626 aa14.04□□□□□ -0.16
LMX1B-202ENST00000373474 CORO1AP31146 461 aaKnown RBP14.04□□□□□ -0.16
LMX1B-202ENST00000373474 OR2B6P58173 313 aa14.04□□□□□ -0.16
LMX1B-202ENST00000373474 FAM171BQ6P995 826 aa14.04□□□□□ -0.16
LMX1B-202ENST00000373474 OR6K2Q8NGY2 324 aa14.04□□□□□ -0.16
LMX1B-202ENST00000373474 ZNF304Q9HCX3 659 aa14.04□□□□□ -0.16
LMX1B-202ENST00000373474 FBXO10Q9UK96 956 aa14.04□□□□□ -0.16
LMX1B-202ENST00000373474 TLL2Q9Y6L7 1015 aa14.04□□□□□ -0.16
LMX1B-202ENST00000373474 TRIM64CA6NLI5 447 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 MAGEB3O15480 346 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 TRIM3O75382 744 aaPredicted RBP14.03□□□□□ -0.16
LMX1B-202ENST00000373474 ERN1O75460 977 aaKnown RBP14.03□□□□□ -0.16
LMX1B-202ENST00000373474 MT-CYBP00156 380 aaPredicted RBP14.03□□□□□ -0.16
LMX1B-202ENST00000373474 MANFP55145 182 aaKnown RBP14.03□□□□□ -0.16
LMX1B-202ENST00000373474 KCNJ11Q14654 390 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 PYHIN1Q6K0P9 492 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 LIX1Q8N485 282 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 FZD8Q9H461 694 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 ELL3Q9HB65 397 aaPredicted RBP14.03□□□□□ -0.16
LMX1B-202ENST00000373474 ABCC6O95255 1503 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 PBX3P40426 434 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 TCEA2Q15560 299 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 MOB2Q70IA6 237 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 CCSER2Q9H7U1 834 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 ABCB9Q9NP78 766 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 INTS10Q9NVR2 710 aaKnown RBP14.03□□□□□ -0.16
LMX1B-202ENST00000373474 NDOR1Q9UHB4 597 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 CNOT6Q9ULM6 557 aaKnown RBP14.03□□□□□ -0.16
LMX1B-202ENST00000373474 ZNF780BQ9Y6R6 833 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 SOWAHBA6NEL2 793 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 FAM86C2PA6NEL3 165 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 WRBO00258 174 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 PLOD2O00469 737 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 KMOO15229 486 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 STK16O75716 305 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 ELFN1P0C7U0 828 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 NR4A1P22736 598 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 IL1R2P27930 398 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 IL10RBQ08334 325 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 SLC10A6Q3KNW5 377 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 KIAA0930Q6ICG6 404 aaPredicted RBP14.03□□□□□ -0.16
LMX1B-202ENST00000373474 SNIP1Q8TAD8 396 aaKnown RBP14.03□□□□□ -0.16
LMX1B-202ENST00000373474 MND1Q9BWT6 205 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 KAT8Q9H7Z6 458 aaKnown RBP14.03□□□□□ -0.16
LMX1B-202ENST00000373474 ATPIF1Q9UII2 106 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 ZFP37Q9Y6Q3 630 aaPredicted RBP14.03□□□□□ -0.16
LMX1B-202ENST00000373474 ANGPTL1O95841 491 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 LMO2P25791 158 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 RPL26P61254 145 aaKnown RBP14.03□□□□□ -0.16
LMX1B-202ENST00000373474 GRSF1Q12849 480 aaKnown RBP eCLIP14.03□□□□□ -0.16
LMX1B-202ENST00000373474 DUSP4Q13115 394 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 ANKRD26P1Q6NSI1 321 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 PRR23CQ6ZRP0 262 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 KCTD8Q6ZWB6 473 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 CHSY3Q70JA7 882 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 PEX5LQ8IYB4 626 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 ZZZ3Q8IYH5 903 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 ZNF285Q96NJ3 590 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 SLC22A4Q9H015 551 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 DNAAF2Q9NVR5 837 aaKnown RBP14.03□□□□□ -0.16
LMX1B-202ENST00000373474 OXSMQ9NWU1 459 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 MEMO1Q9Y316 297 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 RBM7Q9Y580 266 aaKnown RBP14.03□□□□□ -0.16
LMX1B-202ENST00000373474 OAS3Q9Y6K5 1087 aaKnown RBP14.03□□□□□ -0.16
LMX1B-202ENST00000373474 ZNF536O15090 1300 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 FAM159BA6NKW6 160 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 TNFRSF11BO00300 401 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 INSIG1O15503 277 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 SLC7A4O43246 635 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 GPD2P43304 727 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 ATXN1P54253 815 aaKnown RBP14.03□□□□□ -0.16
LMX1B-202ENST00000373474 SIM2Q14190 667 aaPredicted RBP14.03□□□□□ -0.16
LMX1B-202ENST00000373474 ANKRD23Q86SG2 305 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 SIDT2Q8NBJ9 832 aaKnown RBP14.03□□□□□ -0.16
LMX1B-202ENST00000373474 CLEC4CQ8WTT0 213 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 NODALQ96S42 347 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 XKR8Q9H6D3 395 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 CNTN3Q9P232 1028 aa14.03□□□□□ -0.16
LMX1B-202ENST00000373474 TP73O15350 636 aa14.02□□□□□ -0.16
LMX1B-202ENST00000373474 ITM2AO43736 263 aa14.02□□□□□ -0.16
LMX1B-202ENST00000373474 NCK1P16333 377 aa14.02□□□□□ -0.16
LMX1B-202ENST00000373474 ZBTB6Q15916 424 aa14.02□□□□□ -0.16
LMX1B-202ENST00000373474 OCLNQ16625 522 aa14.02□□□□□ -0.16
LMX1B-202ENST00000373474 MPPE1Q53F39 396 aa14.02□□□□□ -0.16
LMX1B-202ENST00000373474 KCNN2Q9H2S1 579 aa14.02□□□□□ -0.16
LMX1B-202ENST00000373474 MIOSQ9NXC5 875 aa14.02□□□□□ -0.16
LMX1B-202ENST00000373474 MID1O15344 667 aa14.02□□□□□ -0.16
LMX1B-202ENST00000373474 ZW10O43264 779 aa14.02□□□□□ -0.16
LMX1B-202ENST00000373474 TREHO43280 583 aa14.02□□□□□ -0.16
LMX1B-202ENST00000373474 GATBO75879 557 aaKnown RBP14.02□□□□□ -0.16
LMX1B-202ENST00000373474 CCNDBP1O95273 360 aa14.02□□□□□ -0.16
LMX1B-202ENST00000373474 LILRA4P59901 499 aa14.02□□□□□ -0.16
LMX1B-202ENST00000373474 CBX2Q14781 532 aaPredicted RBP14.02□□□□□ -0.16
LMX1B-202ENST00000373474 TAF1AQ15573 450 aaPredicted RBP14.02□□□□□ -0.16
LMX1B-202ENST00000373474 COLGALT2Q8IYK4 626 aa14.02□□□□□ -0.16
LMX1B-202ENST00000373474 ZNF615Q8N8J6 731 aa14.02□□□□□ -0.16
LMX1B-202ENST00000373474 MAGEH1Q9H213 219 aa14.02□□□□□ -0.16
LMX1B-202ENST00000373474 SMURF2Q9HAU4 748 aa14.02□□□□□ -0.16
LMX1B-202ENST00000373474 EIF3KQ9UBQ5 218 aaKnown RBP14.02□□□□□ -0.16
LMX1B-202ENST00000373474 GABRDO14764 452 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms