RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 A0A096LPI6 279 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 LOC100506127A0A0U1RQW1 187 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 KRT87PA6NCN2 255 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 NPEPPSL1A6NEC2 478 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 CCRL2O00421 344 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 FFAR3O14843 346 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 TFECO14948 347 aaPredicted RBP5.34□□□□□ -1.55
ATG4A-204ENST00000372246 GPR42O15529 346 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 HOXC11O43248 304 aaPredicted RBP5.34□□□□□ -1.55
ATG4A-204ENST00000372246 CRCPO75575 148 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 ZIC2O95409 532 aaPredicted RBP5.34□□□□□ -1.55
ATG4A-204ENST00000372246 APBA3O96018 575 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 CYBBP04839 570 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 G6PDP11413 515 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 GSTM2P28161 218 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 C21orf33P30042 268 aaPredicted RBP5.34□□□□□ -1.55
ATG4A-204ENST00000372246 ALDH3A2P51648 485 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 NUDT6P53370 316 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 CASP9P55211 416 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 WNT3AP56704 352 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 KCNK10P57789 538 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 SLC10A7Q0GE19 358 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 PPIL2Q13356 520 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 IRF5Q13568 498 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 GALNT3Q14435 633 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 IRF3Q14653 427 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 NPTX1Q15818 432 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 Q5BKY6 102 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 FBXO47Q5MNV8 452 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 AGAP9Q5VTM2 703 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 RSBN1Q5VWQ0 802 aaPredicted RBP5.34□□□□□ -1.55
ATG4A-204ENST00000372246 XRRA1Q6P2D8 792 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 AHSA2Q719I0 299 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 CEP68Q76N32 757 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 B3GNT8Q7Z7M8 397 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 AKAP14Q86UN6 197 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 TAC4Q86UU9 113 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 ZDHHC13Q8IUH4 622 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 CCDC103Q8IW40 242 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 ARHGAP12Q8IWW6 846 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 FAM217AQ8IXS0 508 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 CLYBLQ8N0X4 340 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 KRTCAP2Q8N6L1 136 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 FNDC5Q8NAU1 212 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 PPHLN1Q8NEY8 458 aaKnown RBP5.34□□□□□ -1.55
ATG4A-204ENST00000372246 ZMIZ2Q8NF64 920 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 OR6Q1Q8NGQ2 317 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 PROKR1Q8TCW9 393 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 BLOC1S5Q8TDH9 187 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 BPIFB1Q8TDL5 484 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 TP53INP1Q96A56 240 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 ROPN1LQ96C74 230 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 MTFMTQ96DP5 389 aaKnown RBP5.34□□□□□ -1.55
ATG4A-204ENST00000372246 CDCA5Q96FF9 252 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 ZNF486Q96H40 463 aaPredicted RBP5.34□□□□□ -1.55
ATG4A-204ENST00000372246 UBXN10Q96LJ8 280 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 NSMCE2Q96MF7 247 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 ZNF641Q96N77 438 aaPredicted RBP5.34□□□□□ -1.55
ATG4A-204ENST00000372246 DACH2Q96NX9 599 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 TMEM209Q96SK2 561 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 SMOQ99835 787 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 C17orf80Q9BSJ5 609 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 CCDC68Q9H2F9 335 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 ASB7Q9H672 318 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 EML4Q9HC35 981 aaKnown RBP5.34□□□□□ -1.55
ATG4A-204ENST00000372246 MAGEE1Q9HCI5 957 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 NT5MQ9NPB1 228 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 CRTAC1Q9NQ79 661 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 SDR39U1Q9NRG7 319 aaPredicted RBP5.34□□□□□ -1.55
ATG4A-204ENST00000372246 RGS18Q9NS28 235 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 FARSBQ9NSD9 589 aaKnown RBP5.34□□□□□ -1.55
ATG4A-204ENST00000372246 ERVK13-1Q9NX77 482 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 MAP3K20Q9NYL2 800 aaKnown RBP5.34□□□□□ -1.55
ATG4A-204ENST00000372246 GTF2IRD1Q9UHL9 959 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 EIF2B4Q9UI10 523 aaKnown RBP5.34□□□□□ -1.55
ATG4A-204ENST00000372246 ZMYM5Q9UJ78 669 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 MID2Q9UJV3 735 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 SLC6A14Q9UN76 642 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 SNX8Q9Y5X2 465 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 LCTP09848 1927 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 SIP14410 1827 aa5.34□□□□□ -1.55
ATG4A-204ENST00000372246 LOC100130705A0A1B0GUX0 176 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 ZNF99A8MXY4 864 aaPredicted RBP5.34□□□□□ -1.56
ATG4A-204ENST00000372246 MYO1GB0I1T2 1018 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 hCG_2039718K7EN88 272 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 TAF4O00268 1085 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 OR1I1O60431 355 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 TLR5O60602 858 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 GPR37L1O60883 481 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 CHRM5P08912 532 aaPredicted RBP5.34□□□□□ -1.56
ATG4A-204ENST00000372246 LBPP18428 481 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 AZGP1P25311 298 aaKnown RBP5.34□□□□□ -1.56
ATG4A-204ENST00000372246 SERPINB1P30740 379 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 CCR1P32246 355 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 ICAM3P32942 547 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 LIPAP38571 399 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 HADHAP40939 763 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 CASP3P42574 277 aa5.34□□□□□ -1.56
ATG4A-204ENST00000372246 POLR2JP52435 117 aaKnown RBP5.34□□□□□ -1.56
ATG4A-204ENST00000372246 ISL1P61371 349 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms