RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 SH3BP2P78314 561 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 ZXDBP98169 803 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 CLCQ05315 142 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 LMAN2Q12907 356 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 GPR33Q49SQ1 333 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 ATXN7L2Q5T6C5 722 aaPredicted RBP13.88□□□□□ -0.19
LDB3-204ENST00000372066 TAS2R42Q7RTR8 314 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 LYSMD3Q7Z3D4 306 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 SNX20Q7Z614 316 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 DHDDSQ86SQ9 333 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 HPS6Q86YV9 775 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 TMEM126BQ8IUX1 230 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 APCDD1Q8J025 514 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 RBFAQ8N0V3 343 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 PNPLA1Q8N8W4 532 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 RPLP0P6Q8NHW5 317 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 ZNF483Q8TF39 744 aaPredicted RBP13.88□□□□□ -0.19
LDB3-204ENST00000372066 TWIST2Q8WVJ9 160 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 FUBP1Q96AE4 644 aaKnown RBP13.88□□□□□ -0.19
LDB3-204ENST00000372066 LYSMD1Q96S90 227 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 ZNF184Q99676 751 aaPredicted RBP13.88□□□□□ -0.19
LDB3-204ENST00000372066 ZFYVE1Q9HBF4 777 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 TNFRSF12AQ9NP84 129 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 RXFP3Q9NSD7 469 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 GNPTGQ9UJJ9 305 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 WASF2Q9Y6W5 498 aa13.88□□□□□ -0.19
LDB3-204ENST00000372066 TRBV5-4A0A0C4DH59 114 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 LEFTY2O00292 366 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 BTN3A1O00481 513 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 GIPC1O14908 333 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 NIPSNAP2O75323 286 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 TSPAN12O95859 305 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 SNRPB2P08579 225 aaKnown RBP13.87□□□□□ -0.19
LDB3-204ENST00000372066 ENO3P13929 434 aaPredicted RBP13.87□□□□□ -0.19
LDB3-204ENST00000372066 ME2P23368 584 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 RGS4P49798 205 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 LIMK1P53667 647 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 PKNOX1P55347 436 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 GRIK2Q13002 908 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 TSNQ15631 228 aaKnown RBP13.87□□□□□ -0.19
LDB3-204ENST00000372066 ZNF77Q15935 545 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 GSTA3Q16772 222 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 GEN1Q17RS7 908 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 GRAMD4Q6IC98 578 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 OGFOD2Q6N063 350 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 IRGCQ6NXR0 463 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 ADAMTSL2Q86TH1 951 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 GPSM1Q86YR5 675 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 BBS7Q8IWZ6 715 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 OR2AP1Q8NGE2 309 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 OR56A4Q8NGH8 313 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 SLC26A7Q8TE54 656 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 CCDC124Q96CT7 223 aaKnown RBP13.87□□□□□ -0.19
LDB3-204ENST00000372066 LINGO1Q96FE5 620 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 ZC3H10Q96K80 434 aaKnown RBP13.87□□□□□ -0.19
LDB3-204ENST00000372066 TM6SF2Q9BZW4 377 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 CEP44Q9C0F1 390 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 CLPBQ9H078 707 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 LINC00597Q9H2U6 94 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 SMOC1Q9H4F8 434 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 TMEM45AQ9NWC5 275 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 SUCOQ9UBS9 1254 aaKnown RBP13.87□□□□□ -0.19
LDB3-204ENST00000372066 PCDHGA5Q9Y5G8 931 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 TNPO3Q9Y5L0 923 aaKnown RBP13.87□□□□□ -0.19
LDB3-204ENST00000372066 DNAJC15Q9Y5T4 150 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 SDK1Q7Z5N4 2213 aa13.87□□□□□ -0.19
LDB3-204ENST00000372066 PLXNB3Q9ULL4 1909 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 NPEPPSL1A6NEC2 478 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 TRIM38O00635 465 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 SNX2O60749 519 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 APBB3O95704 486 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 CHRM3P20309 590 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 MPLP40238 635 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 CDKN1CP49918 316 aaPredicted RBP13.86□□□□□ -0.19
LDB3-204ENST00000372066 CLCN7P51798 805 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 DMC1Q14565 340 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 ST3GAL2Q16842 350 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 ZNF423Q2M1K9 1284 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 EML3Q32P44 896 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 MMEL1Q495T6 779 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 PLK5Q496M5 336 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 AGKQ53H12 422 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 STPG1Q5TH74 334 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 ZDHHC20Q5W0Z9 365 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 CLEC6AQ6EIG7 209 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 SYT13Q7L8C5 426 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 SPATA19Q7Z5L4 167 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 TSPEARQ8WU66 669 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 ROPN1LQ96C74 230 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 MARK4Q96L34 752 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 CDRT15Q96T59 188 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 BPIFA1Q9NP55 256 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 C6orf203Q9P0P8 240 aaPredicted RBP13.86□□□□□ -0.19
LDB3-204ENST00000372066 EVLQ9UI08 416 aaPredicted RBP13.86□□□□□ -0.19
LDB3-204ENST00000372066 PCTPQ9UKL6 214 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 PPM1HQ9ULR3 514 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 HS3ST2Q9Y278 367 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 PPIL1Q9Y3C6 166 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 ACACBO00763 2458 aa13.86□□□□□ -0.19
LDB3-204ENST00000372066 CACNA1BQ00975 2339 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms