RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 TBC1D3HP0C7X1 549 aa25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 PRKCQQ04759 706 aa25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 TBC1D3GQ6DHY5 549 aa25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 TBC1D3CQ6IPX1 549 aa25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 KIAA1324Q6UXG2 1013 aaKnown RBP25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 HEATR4Q86WZ0 1026 aa25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 TBC1D3Q8IZP1 549 aaPredicted RBP25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 SKA2Q8WVK7 121 aaPredicted RBP25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 TMEM159Q96B96 161 aa25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 SLC17A9Q9BYT1 436 aa25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 CDYLQ9Y232 598 aa25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 TCRBV21S2A2A0A5A6 115 aa25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 NDUFV2P19404 249 aa25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 SERPINB3P29508 390 aa25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 SP140Q13342 867 aa25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 EPGNQ6UW88 154 aa25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 RPS27LQ71UM5 84 aaKnown RBP25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 MAVSQ7Z434 540 aa25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 HORMAD1Q86X24 394 aa25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 TRAPPC5Q8IUR0 188 aa25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 SYNPOQ8N3V7 929 aa25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 SKA1Q96BD8 255 aa25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 ERP27Q96DN0 273 aa25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 TRIM54Q9BYV2 358 aa25.81■■□□□ 1.72
ATPAF1-202ENST00000371937 PRR23AA6NEV1 266 aa25.8■■□□□ 1.72
ATPAF1-202ENST00000371937 SLC16A5O15375 505 aa25.8■■□□□ 1.72
ATPAF1-202ENST00000371937 IDH3AP50213 366 aa25.8■■□□□ 1.72
ATPAF1-202ENST00000371937 CDK3Q00526 305 aa25.8■■□□□ 1.72
ATPAF1-202ENST00000371937 TFF2Q03403 129 aa25.8■■□□□ 1.72
ATPAF1-202ENST00000371937 LACTB2Q53H82 288 aaPredicted RBP25.8■■□□□ 1.72
ATPAF1-202ENST00000371937 CDKL4Q5MAI5 379 aa25.8■■□□□ 1.72
ATPAF1-202ENST00000371937 ASB11Q8WXH4 323 aa25.8■■□□□ 1.72
ATPAF1-202ENST00000371937 GLMNQ92990 594 aa25.8■■□□□ 1.72
ATPAF1-202ENST00000371937 EBF4Q9BQW3 602 aa25.8■■□□□ 1.72
ATPAF1-202ENST00000371937 OSBPL6Q9BZF3 934 aa25.8■■□□□ 1.72
ATPAF1-202ENST00000371937 ZFP69BQ9UJL9 534 aa25.8■■□□□ 1.72
ATPAF1-202ENST00000371937 LRRC14BA6NHZ5 514 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 DIAPH2O60879 1101 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 CDH13P55290 713 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 CLCQ05315 142 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 LCP2Q13094 533 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 FGL2Q14314 439 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 PHKG1Q16816 387 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 GLIPR1L2Q4G1C9 344 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 SPDYAQ5MJ70 313 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 VRK3Q8IV63 474 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 TP53I13Q8NBR0 393 aaPredicted RBP25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 LINC00615Q96LM1 132 aaPredicted RBP25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 EGFL8Q99944 293 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 SLC12A9Q9BXP2 914 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 TEX101Q9BY14 249 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 MYLK2Q9H1R3 596 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 PARVBQ9HBI1 364 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 POLMQ9NP87 494 aaPredicted RBP25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 CA14Q9ULX7 337 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 MRPS17Q9Y2R5 130 aaKnown RBP25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 PABPN1LA6NDY0 278 aaKnown RBP25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 CCDC22O60826 627 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 LILRB5O75023 590 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 UBOX5O94941 541 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 CHRNB1P11230 501 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 ZNF8P17098 575 aaPredicted RBP25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 TRIM23P36406 574 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 MAPK9P45984 424 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 AGTR2P50052 363 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 INPP5AQ14642 412 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 IRF4Q15306 451 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 PCBP2Q15366 365 aaKnown RBP eCLIP25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 SULT1C3Q6IMI6 304 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 UBE2R2Q712K3 238 aaPredicted RBP25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 ADHFE1Q8IWW8 467 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 ZNF483Q8TF39 744 aaPredicted RBP25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 STON2Q8WXE9 905 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 ASB12Q8WXK4 309 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 DLG3Q92796 817 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 WDR26Q9H7D7 661 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 MBNL1Q9NR56 388 aaKnown RBP25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 ARHGEF3Q9NR81 526 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 PCTPQ9UKL6 214 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 SORCS3Q9UPU3 1222 aa25.79■■□□□ 1.72
ATPAF1-202ENST00000371937 C17orf113A0A1B0GUU1 675 aa25.78■■□□□ 1.72
ATPAF1-202ENST00000371937 SLC5A10A0PJK1 596 aa25.78■■□□□ 1.72
ATPAF1-202ENST00000371937 TMEM202A6NGA9 273 aa25.78■■□□□ 1.72
ATPAF1-202ENST00000371937 LIN7AO14910 233 aaPredicted RBP25.78■■□□□ 1.72
ATPAF1-202ENST00000371937 GRID2O43424 1007 aa25.78■■□□□ 1.72
ATPAF1-202ENST00000371937 MLYCDO95822 493 aa25.78■■□□□ 1.72
ATPAF1-202ENST00000371937 GUCA1CO95843 209 aa25.78■■□□□ 1.72
ATPAF1-202ENST00000371937 GABRG2P18507 467 aa25.78■■□□□ 1.72
ATPAF1-202ENST00000371937 DGKEP52429 567 aa25.78■■□□□ 1.72
ATPAF1-202ENST00000371937 LRRC32Q14392 662 aa25.78■■□□□ 1.72
ATPAF1-202ENST00000371937 GALNTL6Q49A17 601 aa25.78■■□□□ 1.72
ATPAF1-202ENST00000371937 PTBP2Q9UKA9 531 aaKnown RBP25.78■■□□□ 1.72
ATPAF1-202ENST00000371937 TRPC5OSA6NMA1 111 aa25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 GFYI3L273 518 aa25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 UBFD1O14562 309 aaKnown RBP25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 HIST1H2AGP0C0S8 130 aaPredicted RBP25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 HIST1H2ADP20671 130 aa25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 RPIAP49247 311 aa25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 CDKL1Q00532 357 aa25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 PLOD1Q02809 727 aaPredicted RBP25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms