RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 C3orf67Q6ZVT6 689 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 PDZD9Q8IXQ8 264 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 ZNF709Q8N972 641 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 ATP13A1Q9HD20 1204 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 SNTG2Q9NY99 539 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 TAS2R10Q9NYW0 307 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 PCSK2P16519 638 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 NPNTQ6UXI9 565 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 MOB2Q70IA6 237 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 HEXDCQ8WVB3 486 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 SLC38A4Q969I6 547 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 S100A16Q96FQ6 103 aaKnown RBP15.09■□□□□ 0.01
COL5A1-201ENST00000371817 OAZ3Q9UMX2 235 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 ASF1AQ9Y294 204 aa15.09■□□□□ 0.01
COL5A1-201ENST00000371817 NUP214P35658 2090 aaPredicted RBP15.09■□□□□ 0.01
COL5A1-201ENST00000371817 SERPINA13PQ6UXR4 307 aa15.08■□□□□ 0.01
COL5A1-201ENST00000371817 OR5K1Q8NHB7 308 aa15.08■□□□□ 0.01
COL5A1-201ENST00000371817 TREX2Q9BQ50 279 aaPredicted RBP15.08■□□□□ 0.01
COL5A1-201ENST00000371817 SCN8AQ9UQD0 1980 aa15.08■□□□□ 0.01
COL5A1-201ENST00000371817 ITGA10O75578 1167 aa15.08■□□□□ 0.01
COL5A1-201ENST00000371817 CKBP12277 381 aa15.08■□□□□ 0.01
COL5A1-201ENST00000371817 HK1P19367 917 aa15.08■□□□□ 0.01
COL5A1-201ENST00000371817 CD247P20963 164 aa15.08■□□□□ 0.01
COL5A1-201ENST00000371817 SERPINA4P29622 427 aa15.08■□□□□ 0.01
COL5A1-201ENST00000371817 CDH12P55289 794 aa15.08■□□□□ 0.01
COL5A1-201ENST00000371817 SLC1A5Q15758 541 aa15.08■□□□□ 0.01
COL5A1-201ENST00000371817 UBAP2Q5T6F2 1119 aaKnown RBP15.08■□□□□ 0.01
COL5A1-201ENST00000371817 COMMD7Q86VX2 200 aa15.08■□□□□ 0.01
COL5A1-201ENST00000371817 PNLDC1Q8NA58 520 aaKnown RBP15.08■□□□□ 0.01
COL5A1-201ENST00000371817 HJURPQ8NCD3 748 aaPredicted RBP15.08■□□□□ 0.01
COL5A1-201ENST00000371817 GMCL1P1Q8NEA9 526 aa15.08■□□□□ 0.01
COL5A1-201ENST00000371817 CSGALNACT1Q8TDX6 532 aa15.08■□□□□ 0.01
COL5A1-201ENST00000371817 MMP27Q9H306 513 aa15.08■□□□□ 0.01
COL5A1-201ENST00000371817 DLGAP1O14490 977 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 LAMP2P13473 410 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 ZNF35P13682 527 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 HOXD12P35452 270 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 GPR158Q5T848 1215 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 DNAJB9Q9UBS3 223 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 PCDHGB1Q9Y5G3 927 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 TRUB2O95900 331 aaKnown RBP15.08■□□□□ 0
COL5A1-201ENST00000371817 TACSTD2P09758 323 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 POU2F1P14859 743 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 TRIM28Q13263 835 aaKnown RBP15.08■□□□□ 0
COL5A1-201ENST00000371817 VTCN1Q7Z7D3 282 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 AP2M1Q96CW1 435 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 COLEC11Q9BWP8 271 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 C19orf12Q9NSK7 152 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 ZNF226Q9NYT6 803 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 DAPL1A0PJW8 107 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 hCG_2039718K7EN88 272 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 PRKCIP41743 596 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 CPT1AP50416 773 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 CTBP1Q13363 440 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 NFE2Q16621 373 aaPredicted RBP15.08■□□□□ 0
COL5A1-201ENST00000371817 OR10A6Q8NH74 314 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 ATG10Q9H0Y0 220 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 SCP2D1Q9UJQ7 156 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 COL6A2P12110 1019 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 PRMT2P55345 433 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 KLHL6Q8WZ60 621 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 TTYH2Q9BSA4 534 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 TESMINQ9Y4I5 508 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 ST14Q9Y5Y6 855 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 AGAP5A6NIR3 686 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 HOXD10P28358 340 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 ALDH3B2P48448 385 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 CTC1Q2NKJ3 1217 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 PIWIL1Q96J94 861 aaKnown RBP15.08■□□□□ 0
COL5A1-201ENST00000371817 TMEM27Q9HBJ8 222 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 MAP4K5Q9Y4K4 846 aa15.08■□□□□ 0
COL5A1-201ENST00000371817 LOC100130705A0A1B0GUX0 176 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 DCDC2CA8MYV0 355 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 CSDE1O75534 798 aaKnown RBP15.07■□□□□ 0
COL5A1-201ENST00000371817 IDH3AP50213 366 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 CAV3P56539 151 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 ZNF670Q9BS34 389 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 POPDC2Q9HBU9 364 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 POLE4Q9NR33 117 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 ARHGEF4Q9NR80 690 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 ABT1Q9ULW3 272 aaKnown RBP15.07■□□□□ 0
COL5A1-201ENST00000371817 SNAP29O95721 258 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 SYT16Q17RD7 645 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 KCTD19Q17RG1 926 aaPredicted RBP15.07■□□□□ 0
COL5A1-201ENST00000371817 RANBP3LQ86VV4 465 aaPredicted RBP15.07■□□□□ 0
COL5A1-201ENST00000371817 ASB9Q96DX5 294 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 BARD1Q99728 777 aaKnown RBP15.07■□□□□ 0
COL5A1-201ENST00000371817 AARSD1Q9BTE6 412 aaKnown RBP15.07■□□□□ 0
COL5A1-201ENST00000371817 TMEM185BQ9H7F4 350 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 TMEM45AQ9NWC5 275 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 MRTO4Q9UKD2 239 aaKnown RBP15.07■□□□□ 0
COL5A1-201ENST00000371817 SLC16A8O95907 504 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 ENTPD1P49961 510 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 FOXO4P98177 505 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 ARFRP1Q13795 201 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 RNASEH2BQ5TBB1 312 aaKnown RBP15.07■□□□□ 0
COL5A1-201ENST00000371817 SCRN2Q96FV2 425 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 MASTLQ96GX5 879 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 CPB2Q96IY4 423 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 C8orf48Q96LL4 319 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms