RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 TRIM4Q9C037 500 aa28.47■■■□□ 2.15
SSBP3-204ENST00000371320 NANOGQ9H9S0 305 aa28.47■■■□□ 2.15
SSBP3-204ENST00000371320 DYTNA2CJ06 578 aa28.46■■■□□ 2.15
SSBP3-204ENST00000371320 SOCS2O14508 198 aa28.46■■■□□ 2.15
SSBP3-204ENST00000371320 INPP4BO15327 924 aa28.46■■■□□ 2.15
SSBP3-204ENST00000371320 GPIP06744 558 aa28.46■■■□□ 2.15
SSBP3-204ENST00000371320 G6PDP11413 515 aa28.46■■■□□ 2.15
SSBP3-204ENST00000371320 MTHFD1P11586 935 aaKnown RBP28.46■■■□□ 2.15
SSBP3-204ENST00000371320 FASP25445 335 aa28.46■■■□□ 2.15
SSBP3-204ENST00000371320 AP5B1Q2VPB7 878 aa28.46■■■□□ 2.15
SSBP3-204ENST00000371320 NXPE1Q8N323 547 aa28.46■■■□□ 2.15
SSBP3-204ENST00000371320 CBARPQ8N350 705 aaPredicted RBP28.46■■■□□ 2.15
SSBP3-204ENST00000371320 CHCHD4Q8N4Q1 142 aa28.46■■■□□ 2.15
SSBP3-204ENST00000371320 TMEM79Q9BSE2 394 aa28.46■■■□□ 2.15
SSBP3-204ENST00000371320 AGPAT4Q9NRZ5 378 aa28.46■■■□□ 2.15
SSBP3-204ENST00000371320 INTS7Q9NVH2 962 aaKnown RBP28.46■■■□□ 2.15
SSBP3-204ENST00000371320 WWOXQ9NZC7 414 aa28.46■■■□□ 2.15
SSBP3-204ENST00000371320 INTS6Q9UL03 887 aaKnown RBP28.46■■■□□ 2.15
SSBP3-204ENST00000371320 TBX21Q9UL17 535 aa28.46■■■□□ 2.15
SSBP3-204ENST00000371320 RNF11Q9Y3C5 154 aa28.46■■■□□ 2.15
SSBP3-204ENST00000371320 MYOCOSA0A1B0GUC4 107 aa28.46■■■□□ 2.15
SSBP3-204ENST00000371320 SAC3D1A6NKF1 404 aa28.46■■■□□ 2.15
SSBP3-204ENST00000371320 ATP6V1B1P15313 513 aa28.46■■■□□ 2.15
SSBP3-204ENST00000371320 OXTRP30559 389 aa28.46■■■□□ 2.15
SSBP3-204ENST00000371320 PHKG1Q16816 387 aa28.46■■■□□ 2.15
SSBP3-204ENST00000371320 CYP51A1Q16850 503 aa28.46■■■□□ 2.15
SSBP3-204ENST00000371320 SLC2A7Q6PXP3 512 aa28.46■■■□□ 2.15
SSBP3-204ENST00000371320 CYP20A1Q6UW02 462 aa28.46■■■□□ 2.15
SSBP3-204ENST00000371320 ABHD14A-ACY1A0A1B0GW23 586 aa28.45■■■□□ 2.14
SSBP3-204ENST00000371320 TPST1O60507 370 aa28.45■■■□□ 2.14
SSBP3-204ENST00000371320 CCL5P13501 91 aa28.45■■■□□ 2.14
SSBP3-204ENST00000371320 CREB5Q02930 508 aa28.45■■■□□ 2.14
SSBP3-204ENST00000371320 SULT1C3Q6IMI6 304 aa28.45■■■□□ 2.14
SSBP3-204ENST00000371320 CARM1Q86X55 608 aa28.45■■■□□ 2.14
SSBP3-204ENST00000371320 NCSTNQ92542 709 aa28.45■■■□□ 2.14
SSBP3-204ENST00000371320 CD244Q9BZW8 370 aa28.45■■■□□ 2.14
SSBP3-204ENST00000371320 TMEM39AQ9NV64 488 aa28.45■■■□□ 2.14
SSBP3-204ENST00000371320 OPTCQ9UBM4 332 aa28.45■■■□□ 2.14
SSBP3-204ENST00000371320 GRXCR2A6NFK2 248 aa28.44■■■□□ 2.14
SSBP3-204ENST00000371320 NPIPB15A6NHN6 443 aaPredicted RBP28.44■■■□□ 2.14
SSBP3-204ENST00000371320 TGM5O43548 720 aa28.44■■■□□ 2.14
SSBP3-204ENST00000371320 OR6B1O95007 311 aa28.44■■■□□ 2.14
SSBP3-204ENST00000371320 NCK1P16333 377 aa28.44■■■□□ 2.14
SSBP3-204ENST00000371320 ROR2Q01974 943 aaKnown RBP28.44■■■□□ 2.14
SSBP3-204ENST00000371320 SEMG2Q02383 582 aa28.44■■■□□ 2.14
SSBP3-204ENST00000371320 AASDHQ4L235 1098 aaPredicted RBP28.44■■■□□ 2.14
SSBP3-204ENST00000371320 CMTR2Q8IYT2 770 aaKnown RBP28.44■■■□□ 2.14
SSBP3-204ENST00000371320 DPP10Q8N608 796 aa28.44■■■□□ 2.14
SSBP3-204ENST00000371320 TRPV3Q8NET8 790 aa28.44■■■□□ 2.14
SSBP3-204ENST00000371320 DIS3LQ8TF46 1054 aaKnown RBP28.44■■■□□ 2.14
SSBP3-204ENST00000371320 ZFAND2BQ8WV99 257 aa28.44■■■□□ 2.14
SSBP3-204ENST00000371320 POLR3HQ9Y535 204 aaPredicted RBP28.44■■■□□ 2.14
SSBP3-204ENST00000371320 TRAV19A0A0A6YYK7 116 aa28.44■■■□□ 2.14
SSBP3-204ENST00000371320 FAM149AA5PLN7 773 aa28.44■■■□□ 2.14
SSBP3-204ENST00000371320 LRG1P02750 347 aa28.44■■■□□ 2.14
SSBP3-204ENST00000371320 ENO2P09104 434 aaPredicted RBP28.44■■■□□ 2.14
SSBP3-204ENST00000371320 GDF5P43026 501 aa28.44■■■□□ 2.14
SSBP3-204ENST00000371320 CTSOP43234 321 aaPredicted RBP28.44■■■□□ 2.14
SSBP3-204ENST00000371320 STK19P49842 368 aaPredicted RBP28.44■■■□□ 2.14
SSBP3-204ENST00000371320 SNRPD1P62314 119 aaKnown RBP28.44■■■□□ 2.14
SSBP3-204ENST00000371320 RFTN2Q52LD8 501 aaPredicted RBP28.44■■■□□ 2.14
SSBP3-204ENST00000371320 CRTC1Q6UUV9 634 aa28.44■■■□□ 2.14
SSBP3-204ENST00000371320 TMC8Q8IU68 726 aa28.44■■■□□ 2.14
SSBP3-204ENST00000371320 HID1Q8IV36 788 aa28.44■■■□□ 2.14
SSBP3-204ENST00000371320 PACRGLQ8N7B6 248 aa28.44■■■□□ 2.14
SSBP3-204ENST00000371320 GPR26Q8NDV2 337 aa28.44■■■□□ 2.14
SSBP3-204ENST00000371320 PPP3R2Q96LZ3 170 aa28.44■■■□□ 2.14
SSBP3-204ENST00000371320 ATP11BQ9Y2G3 1177 aa28.44■■■□□ 2.14
SSBP3-204ENST00000371320 LILRB3O75022 631 aa28.43■■■□□ 2.14
SSBP3-204ENST00000371320 SRCP12931 536 aa28.43■■■□□ 2.14
SSBP3-204ENST00000371320 GJA1P17302 382 aa28.43■■■□□ 2.14
SSBP3-204ENST00000371320 SOX11P35716 441 aa28.43■■■□□ 2.14
SSBP3-204ENST00000371320 TTLL9Q3SXZ7 439 aa28.43■■■□□ 2.14
SSBP3-204ENST00000371320 INTS11Q5TA45 600 aaKnown RBP28.43■■■□□ 2.14
SSBP3-204ENST00000371320 CBR4Q8N4T8 237 aa28.43■■■□□ 2.14
SSBP3-204ENST00000371320 RHBDF1Q96CC6 855 aa28.43■■■□□ 2.14
SSBP3-204ENST00000371320 ASIC4Q96FT7 647 aa28.43■■■□□ 2.14
SSBP3-204ENST00000371320 CENPNQ96H22 339 aaPredicted RBP28.43■■■□□ 2.14
SSBP3-204ENST00000371320 LYSMD1Q96S90 227 aa28.43■■■□□ 2.14
SSBP3-204ENST00000371320 ACTL8Q9H568 366 aa28.43■■■□□ 2.14
SSBP3-204ENST00000371320 LATS2Q9NRM7 1088 aa28.43■■■□□ 2.14
SSBP3-204ENST00000371320 OBSL1O75147 1896 aa28.43■■■□□ 2.14
SSBP3-204ENST00000371320 BNIP3LO60238 219 aa28.42■■■□□ 2.14
SSBP3-204ENST00000371320 CHRM1P11229 460 aaPredicted RBP28.42■■■□□ 2.14
SSBP3-204ENST00000371320 MSH3P20585 1137 aa28.42■■■□□ 2.14
SSBP3-204ENST00000371320 APOFQ13790 326 aa28.42■■■□□ 2.14
SSBP3-204ENST00000371320 NHSL2Q5HYW2 709 aa28.42■■■□□ 2.14
SSBP3-204ENST00000371320 LRRC3Q9BY71 257 aa28.42■■■□□ 2.14
SSBP3-204ENST00000371320 DUS2Q9NX74 493 aaKnown RBP28.42■■■□□ 2.14
SSBP3-204ENST00000371320 SLC4A7Q9Y6M7 1214 aa28.42■■■□□ 2.14
SSBP3-204ENST00000371320 A0A1W2PRU2 124 aa28.42■■■□□ 2.14
SSBP3-204ENST00000371320 TCRBV5S2A0A599 114 aa28.42■■■□□ 2.14
SSBP3-204ENST00000371320 LEFTY2O00292 366 aa28.42■■■□□ 2.14
SSBP3-204ENST00000371320 FCGR1AP12314 374 aa28.42■■■□□ 2.14
SSBP3-204ENST00000371320 SLC2A4P14672 509 aa28.42■■■□□ 2.14
SSBP3-204ENST00000371320 PTPN5P54829 565 aa28.42■■■□□ 2.14
SSBP3-204ENST00000371320 CREMQ03060 361 aa28.42■■■□□ 2.14
SSBP3-204ENST00000371320 MYLK3Q32MK0 819 aa28.42■■■□□ 2.14
SSBP3-204ENST00000371320 KRT80Q6KB66 452 aa28.42■■■□□ 2.14
SSBP3-204ENST00000371320 TPRG1Q6ZUI0 275 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms