RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 SLC25A13Q9UJS0 675 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 GPR179Q6PRD1 2367 aa8.7□□□□□ -1.02
TPM3-213ENST00000368545 ZNF292O60281 2723 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.69□□□□□ -1.02
TPM3-213ENST00000368545 FOXO6A8MYZ6 492 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 UGT1A9O60656 530 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 IGSF6O95976 241 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 ITGA2BP08514 1039 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 FAM87AP0C7U9 286 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 TYRP14679 529 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 GLB1P16278 677 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 HLA-FP30511 346 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 CD70P32970 193 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 ARCN1P48444 511 aaKnown RBP8.69□□□□□ -1.02
TPM3-213ENST00000368545 NUMBP49757 651 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 LIMK2P53671 638 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 IHHQ14623 411 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 HSP90AA5PQ58FG0 334 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 DGKKQ5KSL6 1271 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 NCEH1Q6PIU2 408 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 KIAA0408Q6ZU52 694 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 TMEM25Q86YD3 366 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 NPAS3Q8IXF0 933 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 ZZZ3Q8IYH5 903 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 C12orf76Q8N812 135 aaPredicted RBP8.69□□□□□ -1.02
TPM3-213ENST00000368545 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.69□□□□□ -1.02
TPM3-213ENST00000368545 BRSK1Q8TDC3 778 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 OSCP1Q8WVF1 389 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 ATP2A3Q93084 1043 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 ISG20Q96AZ6 181 aaKnown RBP8.69□□□□□ -1.02
TPM3-213ENST00000368545 ZNF778Q96MU6 729 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 UGT1A7Q9HAW7 530 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 UGT1A10Q9HAW8 530 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 UGT1A8Q9HAW9 530 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 IARS2Q9NSE4 1012 aaKnown RBP8.69□□□□□ -1.02
TPM3-213ENST00000368545 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.69□□□□□ -1.022e-8■■□□□ 11.4
TPM3-213ENST00000368545 GGA2Q9UJY4 613 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 SRPK3Q9UPE1 567 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 HS3ST2Q9Y278 367 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 MYO10Q9HD67 2058 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 GMNCA6NCL1 334 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 COPEO14579 308 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 SOCS5O75159 536 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 SPAG7O75391 227 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 ECI2O75521 394 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 GJB3O75712 270 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 RHOBTB1O94844 696 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 PLA2G2AP14555 144 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 PIK3CBP42338 1070 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 POLD2P49005 469 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 SERPINB8P50452 374 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 MANFP55145 182 aaKnown RBP8.69□□□□□ -1.02
TPM3-213ENST00000368545 PCBP3P57721 371 aaKnown RBP8.69□□□□□ -1.02
TPM3-213ENST00000368545 PDE1BQ01064 536 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 ACVR1Q04771 509 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 THOC5Q13769 683 aaKnown RBP8.69□□□□□ -1.02
TPM3-213ENST00000368545 GALNT3Q14435 633 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 CNGA3Q16281 694 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 LY6G5CQ5SRR4 150 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 MROH9Q5TGP6 573 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 RNF220Q5VTB9 566 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 SH2D5Q6ZV89 423 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 GALNT7Q86SF2 657 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 ADGRG2Q8IZP9 1017 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 MFSD4AQ8N468 514 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 OR2C3Q8N628 320 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 MGARPQ8TDB4 240 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 BPIFB1Q8TDL5 484 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 BCAS4Q8TDM0 211 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 DENND1AQ8TEH3 1009 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 STYXQ8WUJ0 223 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 SMARCD2Q92925 531 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 CHMP6Q96FZ7 201 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 SERAC1Q96JX3 654 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 CABS1Q96KC9 395 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 C16orf92Q96LL3 132 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 CD244Q9BZW8 370 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 TRPV4Q9HBA0 871 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 DUS2Q9NX74 493 aaKnown RBP8.69□□□□□ -1.02
TPM3-213ENST00000368545 IL1RAPL1Q9NZN1 696 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 PRDM4Q9UKN5 801 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 INTS6Q9UL03 887 aaKnown RBP8.69□□□□□ -1.02
TPM3-213ENST00000368545 CDH7Q9ULB5 785 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 CLEC4EQ9ULY5 219 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 PSAT1Q9Y617 370 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 WNT6Q9Y6F9 365 aa8.69□□□□□ -1.02
TPM3-213ENST00000368545 H7BY64 318 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 SLC7A4O43246 635 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 HOXC11O43248 304 aaPredicted RBP8.68□□□□□ -1.02
TPM3-213ENST00000368545 LDB2O43679 373 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 VAPBO95292 243 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 NFATC1O95644 943 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 FAM107AO95990 144 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 RPA3P35244 121 aaPredicted RBP8.68□□□□□ -1.02
TPM3-213ENST00000368545 CCT5P48643 541 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 RPL26P61254 145 aaKnown RBP8.68□□□□□ -1.02
TPM3-213ENST00000368545 SNRPD1P62314 119 aaKnown RBP8.68□□□□□ -1.02
TPM3-213ENST00000368545 PRAMEP78395 509 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 BMPR2Q13873 1038 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 TAF1AQ15573 450 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms