RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 CYTH2Q99418 400 aa13.62□□□□□ -0.23
TPM3-211ENST00000368531 GPR21Q99679 349 aa13.62□□□□□ -0.23
TPM3-211ENST00000368531 ACSS3Q9H6R3 686 aa13.62□□□□□ -0.23
TPM3-211ENST00000368531 SCHIP1Q9P0W5 487 aaPredicted RBP13.62□□□□□ -0.23
TPM3-211ENST00000368531 FTSJ1Q9UET6 329 aa13.62□□□□□ -0.23
TPM3-211ENST00000368531 PCOLCE2Q9UKZ9 415 aa13.62□□□□□ -0.23
TPM3-211ENST00000368531 RAB21Q9UL25 225 aa13.62□□□□□ -0.23
TPM3-211ENST00000368531 FAM95CA0A1B0GW59 222 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 CPED1A4D0V7 1026 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 PRR19A6NJB7 356 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 OR52A4PA6NMU1 304 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 LIN7AO14910 233 aaPredicted RBP13.61□□□□□ -0.23
TPM3-211ENST00000368531 NOBOXO60393 691 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 VPS26AO75436 327 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 GSTM1P09488 218 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 SLC35G4P0C7Q5 338 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 BRAFP15056 766 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 HALP42357 657 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 CDKN2DP55273 166 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 GSTM4Q03013 218 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 DNAJC3Q13217 504 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 TMED2Q15363 201 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 NR0B2Q15466 257 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 ZNF658BQ4V348 819 aaPredicted RBP13.61□□□□□ -0.23
TPM3-211ENST00000368531 IYDQ6PHW0 289 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 OGFOD3Q6PK18 319 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 GALNT7Q86SF2 657 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 PIM3Q86V86 326 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 VRK3Q8IV63 474 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 ZBTB2Q8N680 514 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 ARL10Q8N8L6 244 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 MAPK15Q8TD08 544 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 SLC37A2Q8TED4 501 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 SKA2Q8WVK7 121 aaPredicted RBP13.61□□□□□ -0.23
TPM3-211ENST00000368531 GLMNQ92990 594 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 VPS39Q96JC1 886 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 RMDN2Q96LZ7 410 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 C12orf66Q96MD2 445 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 RBBP8Q99708 897 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 SLC30A3Q99726 388 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 EPB41L4BQ9H329 900 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 RHOJQ9H4E5 214 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 ACSL5Q9ULC5 683 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 SLC39A10Q9ULF5 831 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 MTO1Q9Y2Z2 717 aaKnown RBP13.61□□□□□ -0.23
TPM3-211ENST00000368531 VWA7Q9Y334 891 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 COMMD10Q9Y6G5 202 aa13.61□□□□□ -0.23
TPM3-211ENST00000368531 PRAMEF33A0A0G2JMD5 474 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 EXOC1LA0A1B0GW35 172 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 SLC5A10A0PJK1 596 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 KLHL33A6NCF5 533 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 A6NCN8 305 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 SLC30A4O14863 429 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 KPNA5O15131 536 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 TUBBP07437 444 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 ABHD2P08910 425 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 MSH2P43246 934 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 ABRQ12979 859 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 NAB1Q13506 487 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 KLHL38Q2WGJ6 581 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 PROX2Q3B8N5 592 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 C14orf28Q4W4Y0 310 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 ACSBG2Q5FVE4 666 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 GRTP1Q5TC63 336 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 FAM45BPQ6NSW5 357 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 DUS1LQ6P1R4 473 aaKnown RBP13.6□□□□□ -0.23
TPM3-211ENST00000368531 EMBQ6PCB8 327 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 ABRAXAS1Q6UWZ7 409 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 PIP4P1Q86T03 277 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 ZNF761Q86XN6 746 aaPredicted RBP13.6□□□□□ -0.23
TPM3-211ENST00000368531 TRIM48Q8IWZ4 208 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 ARL14Q8N4G2 192 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 PHC3Q8NDX5 983 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 GPR156Q8NFN8 814 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 CFAP61Q8NHU2 1237 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 FAM45AQ8TCE6 357 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 ASZ1Q8WWH4 475 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 CXorf40BQ96DE9 158 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 INSM2Q96T92 566 aaPredicted RBP13.6□□□□□ -0.23
TPM3-211ENST00000368531 OLFM1Q99784 485 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 FUT8Q9BYC5 575 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 SLC32A1Q9H598 525 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 CAB39LQ9H9S4 337 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 IMP3Q9NV31 184 aaKnown RBP13.6□□□□□ -0.23
TPM3-211ENST00000368531 TAS2R13Q9NYV9 303 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 ZNF624Q9P2J8 865 aaPredicted RBP13.6□□□□□ -0.23
TPM3-211ENST00000368531 TRMT6Q9UJA5 497 aaKnown RBP13.6□□□□□ -0.23
TPM3-211ENST00000368531 MYO15AQ9UKN7 3530 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 PADI4Q9UM07 663 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 MED16Q9Y2X0 877 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 DHRS7Q9Y394 339 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 IKBKGQ9Y6K9 419 aa13.6□□□□□ -0.23
TPM3-211ENST00000368531 ZFHX2Q9C0A1 2572 aaPredicted RBP13.6□□□□□ -0.23
TPM3-211ENST00000368531 EP300Q09472 2414 aaPredicted RBP13.6□□□□□ -0.23
TPM3-211ENST00000368531 COL5A1P20908 1838 aaPredicted RBP13.6□□□□□ -0.23
TPM3-211ENST00000368531 FAM186AA6NE01 2351 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 LY6G6EA0A0G2JKS1 128 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 IFRD1O00458 451 aaPredicted RBP13.59□□□□□ -0.23
TPM3-211ENST00000368531 CBFA2T3O75081 653 aa13.59□□□□□ -0.23
TPM3-211ENST00000368531 INHBAP08476 426 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms