RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 WDR4P57081 412 aaKnown RBP11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 CYP4F3Q08477 520 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 TAF13Q15543 124 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 DDI2Q5TDH0 399 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 LCN1P1Q5VSP4 162 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 OLFML1Q6UWY5 402 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 ZNF730Q6ZMV8 503 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 SLAIN1Q8ND83 568 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 PIGXQ8TBF5 258 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 NMBRP28336 390 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 ATP4BP51164 291 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 RAB43Q86YS6 212 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 BPIFA1Q9NP55 256 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 MSRAQ9UJ68 235 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 TNFRSF11BO00300 401 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 GOT2P00505 430 aaKnown RBP11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 PIRTP0C851 137 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 DBTP11182 482 aaKnown RBP11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 FAM174BQ3ZCQ3 159 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 CHADLQ6NUI6 762 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 HEATR4Q86WZ0 1026 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 ZNF420Q8TAQ5 688 aaPredicted RBP11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 EFCAB11Q9BUY7 163 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 FADS2O95864 444 aaKnown RBP11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 C8BP07358 591 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 ANXA4P09525 319 aaPredicted RBP11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 PPM1JQ5JR12 505 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 VARS2Q5ST30 1063 aaKnown RBP11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 ATXN7L2Q5T6C5 722 aaPredicted RBP11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 ERI1Q8IV48 349 aaKnown RBP11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 EZH1Q92800 747 aaPredicted RBP11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 ACTR3BQ9P1U1 418 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 DEC1Q9P2X7 70 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 H0YJX3 145 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 TBATAQ96M53 351 aa11.88□□□□□ -0.51
CDC42BPA-203ENST00000366766 RPL4P36578 427 aaKnown RBP11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 ZNF311Q5JNZ3 666 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 USP43Q70EL4 1123 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 CHST9Q7L1S5 443 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 TAC4Q86UU9 113 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 TREHO43280 583 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 DET1Q7L5Y6 550 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 SPPL2CQ8IUH8 684 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 OR5K1Q8NHB7 308 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 SUSD3Q96L08 255 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 PIAS1O75925 651 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 TMEM63AO94886 807 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 FOXN2P32314 431 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 TUBA3EQ6PEY2 450 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 CAMKK1Q8N5S9 505 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 ZSCAN5AQ9BUG6 496 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 ZBTB26Q9HCK0 441 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 NR2E3Q9Y5X4 410 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 LCHNA4D1U4 455 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 FAM155BO75949 473 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 PGK1P00558 417 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 MAPK12P53778 367 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 TMPRSS11BQ86T26 416 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 GPR88Q9GZN0 384 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 RIPK3Q9Y572 518 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 FKTNO75072 461 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 KHKP50053 298 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 PAMR1Q6UXH9 720 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 OMA1Q96E52 524 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 SLC7A8Q9UHI5 535 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 TAS2R39P59534 338 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 GALNT2Q10471 571 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 TCEAL5Q5H9L2 206 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 ZNF783Q6ZMS7 281 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 CLEC20AQ6ZU45 233 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 ZC3HC1Q86WB0 502 aaKnown RBP11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 COMMD2Q86X83 199 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 KBTBD2Q8IY47 623 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 ENDOVQ8N8Q3 282 aaKnown RBP11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 HMCESQ96FZ2 354 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 CEP295NLQ96MC4 621 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 TRIM2Q9C040 744 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 NWD2Q9ULI1 1742 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 LRATO95237 230 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 IDSP22304 550 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 NR4A1P22736 598 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 TARBP2Q15633 366 aaKnown RBP11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 FAM189A2Q15884 450 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 ZSWIM7Q19AV6 140 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 ADAMTS15Q8TE58 950 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 COL26A1Q96A83 441 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 AURKBQ96GD4 344 aaPredicted RBP11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 SIRPGQ9P1W8 387 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 CD48P09326 243 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 KLHL23Q8NBE8 558 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 HIPK3Q9H422 1215 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 NR2E1Q9Y466 385 aa11.87□□□□□ -0.51
CDC42BPA-203ENST00000366766 USP54Q70EL1 1684 aa11.86□□□□□ -0.51
CDC42BPA-203ENST00000366766 DPPA5A6NC42 116 aa11.86□□□□□ -0.51
CDC42BPA-203ENST00000366766 STX16-NPEPL1H3BU86 382 aa11.86□□□□□ -0.51
CDC42BPA-203ENST00000366766 CXCR6O00574 342 aa11.86□□□□□ -0.51
CDC42BPA-203ENST00000366766 STX16O14662 325 aa11.86□□□□□ -0.51
CDC42BPA-203ENST00000366766 USP2O75604 605 aaPredicted RBP11.86□□□□□ -0.51
CDC42BPA-203ENST00000366766 EVX2Q03828 476 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms