RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 PLEKHS1Q5SXH7 462 aa20.27■□□□□ 0.84
SHISA4-201ENST00000362011 AGAP9Q5VTM2 703 aa20.27■□□□□ 0.84
SHISA4-201ENST00000362011 Q6ZSR6 202 aa20.27■□□□□ 0.84
SHISA4-201ENST00000362011 CDHR3Q6ZTQ4 885 aa20.27■□□□□ 0.84
SHISA4-201ENST00000362011 CPNE9Q8IYJ1 553 aa20.27■□□□□ 0.84
SHISA4-201ENST00000362011 CENPLQ8N0S6 344 aaPredicted RBP20.27■□□□□ 0.84
SHISA4-201ENST00000362011 ANKRD42Q8N9B4 389 aa20.27■□□□□ 0.84
SHISA4-201ENST00000362011 OR13H1Q8NG92 308 aa20.27■□□□□ 0.84
SHISA4-201ENST00000362011 TCP10LQ8TDR4 215 aa20.27■□□□□ 0.84
SHISA4-201ENST00000362011 ANKRD49Q8WVL7 239 aa20.27■□□□□ 0.84
SHISA4-201ENST00000362011 NXNL1Q96CM4 212 aa20.27■□□□□ 0.84
SHISA4-201ENST00000362011 UBXN10Q96LJ8 280 aa20.27■□□□□ 0.84
SHISA4-201ENST00000362011 LINC00615Q96LM1 132 aaPredicted RBP20.27■□□□□ 0.84
SHISA4-201ENST00000362011 ARRDC1-AS1Q9H2J1 176 aa20.27■□□□□ 0.84
SHISA4-201ENST00000362011 CNOT10Q9H9A5 744 aaKnown RBP20.27■□□□□ 0.84
SHISA4-201ENST00000362011 RXFP3Q9NSD7 469 aa20.27■□□□□ 0.84
SHISA4-201ENST00000362011 NKIRAS1Q9NYS0 192 aa20.27■□□□□ 0.84
SHISA4-201ENST00000362011 MOSPD1Q9UJG1 213 aa20.27■□□□□ 0.84
SHISA4-201ENST00000362011 PCDHGA5Q9Y5G8 931 aa20.27■□□□□ 0.84
SHISA4-201ENST00000362011 DNMT3AQ9Y6K1 912 aaPredicted RBP20.27■□□□□ 0.84
SHISA4-201ENST00000362011 KMOO15229 486 aa20.27■□□□□ 0.83
SHISA4-201ENST00000362011 GRID2O43424 1007 aa20.27■□□□□ 0.83
SHISA4-201ENST00000362011 APOA4P06727 396 aa20.27■□□□□ 0.83
SHISA4-201ENST00000362011 CEACAM5P06731 702 aa20.27■□□□□ 0.83
SHISA4-201ENST00000362011 CBSLP0DN79 551 aa20.27■□□□□ 0.83
SHISA4-201ENST00000362011 DGKAP23743 735 aa20.27■□□□□ 0.83
SHISA4-201ENST00000362011 CBSP35520 551 aa20.27■□□□□ 0.83
SHISA4-201ENST00000362011 DLG1Q12959 904 aa20.27■□□□□ 0.83
SHISA4-201ENST00000362011 BOP1Q14137 746 aaKnown RBP20.27■□□□□ 0.83
SHISA4-201ENST00000362011 PTK2BQ14289 1009 aa20.27■□□□□ 0.83
SHISA4-201ENST00000362011 SF3A2Q15428 464 aaKnown RBP20.27■□□□□ 0.83
SHISA4-201ENST00000362011 KLC3Q6P597 504 aa20.27■□□□□ 0.83
SHISA4-201ENST00000362011 ENPP7Q6UWV6 458 aa20.27■□□□□ 0.83
SHISA4-201ENST00000362011 ZNF547Q8IVP9 402 aa20.27■□□□□ 0.83
SHISA4-201ENST00000362011 SPNS2Q8IVW8 549 aa20.27■□□□□ 0.83
SHISA4-201ENST00000362011 OR56A4Q8NGH8 313 aa20.27■□□□□ 0.83
SHISA4-201ENST00000362011 LINGO1Q96FE5 620 aa20.27■□□□□ 0.83
SHISA4-201ENST00000362011 SCYL1Q96KG9 808 aa20.27■□□□□ 0.83
SHISA4-201ENST00000362011 NMRAL1Q9HBL8 299 aa20.27■□□□□ 0.83
SHISA4-201ENST00000362011 IGSF5Q9NSI5 407 aa20.27■□□□□ 0.83
SHISA4-201ENST00000362011 ZNF358Q9NW07 568 aa20.27■□□□□ 0.83
SHISA4-201ENST00000362011 OGFRQ9NZT2 677 aa20.27■□□□□ 0.83
SHISA4-201ENST00000362011 ZNHIT2Q9UHR6 403 aa20.27■□□□□ 0.83
SHISA4-201ENST00000362011 PLLPQ9Y342 182 aa20.27■□□□□ 0.83
SHISA4-201ENST00000362011 C17orf113A0A1B0GUU1 675 aa20.26■□□□□ 0.83
SHISA4-201ENST00000362011 PRSS38A1L453 326 aa20.26■□□□□ 0.83
SHISA4-201ENST00000362011 EIF3FO00303 357 aaPredicted RBP20.26■□□□□ 0.83
SHISA4-201ENST00000362011 THEGLP0DJG4 465 aa20.26■□□□□ 0.83
SHISA4-201ENST00000362011 GBX1Q14549 363 aa20.26■□□□□ 0.83
SHISA4-201ENST00000362011 PLA2G4EQ3MJ16 856 aa20.26■□□□□ 0.83
SHISA4-201ENST00000362011 SYTL3Q4VX76 610 aa20.26■□□□□ 0.83
SHISA4-201ENST00000362011 WDR45BQ5MNZ6 344 aa20.26■□□□□ 0.83
SHISA4-201ENST00000362011 N4BP2L1Q5TBK1 243 aaPredicted RBP20.26■□□□□ 0.83
SHISA4-201ENST00000362011 LRRC8EQ6NSJ5 796 aa20.26■□□□□ 0.83
SHISA4-201ENST00000362011 NAPRTQ6XQN6 538 aa20.26■□□□□ 0.83
SHISA4-201ENST00000362011 RGL4Q8IZJ4 473 aa20.26■□□□□ 0.83
SHISA4-201ENST00000362011 HM13Q8TCT9 377 aa20.26■□□□□ 0.83
SHISA4-201ENST00000362011 ASZ1Q8WWH4 475 aa20.26■□□□□ 0.83
SHISA4-201ENST00000362011 KLHDC7BQ96G42 594 aa20.26■□□□□ 0.83
SHISA4-201ENST00000362011 SCARF2Q96GP6 870 aaPredicted RBP20.26■□□□□ 0.83
SHISA4-201ENST00000362011 DERL2Q9GZP9 239 aa20.26■□□□□ 0.83
SHISA4-201ENST00000362011 MIR1-1HGQ9H1L0 117 aa20.26■□□□□ 0.83
SHISA4-201ENST00000362011 TMEM216Q9P0N5 145 aa20.26■□□□□ 0.83
SHISA4-201ENST00000362011 SLC17A7Q9P2U7 560 aa20.26■□□□□ 0.83
SHISA4-201ENST00000362011 PI4KAP42356 2102 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 KLHL33A6NCF5 533 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 MGAT4DA6NG13 374 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 TNFRSF10CO14798 259 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 POP7O75817 140 aaKnown RBP20.25■□□□□ 0.83
SHISA4-201ENST00000362011 ENO3P13929 434 aaPredicted RBP20.25■□□□□ 0.83
SHISA4-201ENST00000362011 CD1DP15813 335 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 MAOBP27338 520 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 CD38P28907 300 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 ATP1A2P50993 1020 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 ATP6V0D1P61421 351 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 RACK1P63244 317 aaKnown RBP20.25■□□□□ 0.83
SHISA4-201ENST00000362011 MPP2Q14168 576 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 CCDC153Q494R4 210 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 AASDHQ4L235 1098 aaPredicted RBP20.25■□□□□ 0.83
SHISA4-201ENST00000362011 ACSBG2Q5FVE4 666 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 TPRG1LQ5T0D9 272 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 C16orf46Q6P387 395 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 C11orf96Q7Z7L8 435 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 DCP2Q8IU60 420 aaKnown RBP20.25■□□□□ 0.83
SHISA4-201ENST00000362011 GALNT13Q8IUC8 556 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 MYO1HQ8N1T3 1032 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 SPATA6LQ8N4H0 392 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 OXR1Q8N573 874 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 MFSD2AQ8NA29 543 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 OR2L2Q8NH16 312 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 EEF1AKMT1Q8WVE0 214 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 DNASE2BQ8WZ79 361 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 PDLIM5Q96HC4 596 aaKnown RBP20.25■□□□□ 0.83
SHISA4-201ENST00000362011 FAM111AQ96PZ2 611 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 C12orf65Q9H3J6 166 aaKnown RBP20.25■□□□□ 0.83
SHISA4-201ENST00000362011 FGF22Q9HCT0 170 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 GPR27Q9NS67 375 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 FAM8A1Q9UBU6 413 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 KLQ9UEF7 1012 aa20.25■□□□□ 0.83
SHISA4-201ENST00000362011 ANGPTL2Q9UKU9 493 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms